RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 DDX54Q8TDD1 881 aaKnown RBP23.03■■□□□ 1.28
SBDS-205ENST00000617799 UPF1Q92900 1129 aaKnown RBP eCLIP23.03■■□□□ 1.28
SBDS-205ENST00000617799 AEBP1Q8IUX7 1158 aa23.02■■□□□ 1.28
SBDS-205ENST00000617799 PRKRIP1Q9H875 184 aaPredicted RBP23.02■■□□□ 1.28
SBDS-205ENST00000617799 ANP32CO43423 234 aa23.01■■□□□ 1.27
SBDS-205ENST00000617799 NUDCQ9Y266 331 aa23.01■■□□□ 1.27
SBDS-205ENST00000617799 SHANK3Q9BYB0 1731 aa23■■□□□ 1.27
SBDS-205ENST00000617799 HMOX1P09601 288 aa23■■□□□ 1.27
SBDS-205ENST00000617799 PKD1L3Q7Z443 1732 aa22.99■■□□□ 1.27
SBDS-205ENST00000617799 SF3B2Q13435 895 aaKnown RBP22.99■■□□□ 1.27
SBDS-205ENST00000617799 SPG7Q9UQ90 795 aa22.99■■□□□ 1.27
SBDS-205ENST00000617799 PCDH11XQ9BZA7 1347 aa22.98■■□□□ 1.27
SBDS-205ENST00000617799 PCDH11YQ9BZA8 1340 aa22.98■■□□□ 1.27
SBDS-205ENST00000617799 KDRP35968 1356 aa22.97■■□□□ 1.27
SBDS-205ENST00000617799 TRIM37O94972 964 aa22.96■■□□□ 1.27
SBDS-205ENST00000617799 U2AF1L5P0DN76 240 aaPredicted RBP22.95■■□□□ 1.26
SBDS-205ENST00000617799 U2AF1Q01081 240 aaKnown RBP eCLIP22.95■■□□□ 1.26
SBDS-205ENST00000617799 DIEXFQ68CQ4 756 aaKnown RBP22.95■■□□□ 1.26
SBDS-205ENST00000617799 PLEKHO1Q53GL0 409 aaPredicted RBP22.94■■□□□ 1.26
SBDS-205ENST00000617799 CCDC125Q86Z20 511 aa22.94■■□□□ 1.26
SBDS-205ENST00000617799 PLEKHG2Q9H7P9 1386 aa22.93■■□□□ 1.26
SBDS-205ENST00000617799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.26
SBDS-205ENST00000617799 EP400Q96L91 3159 aa22.93■■□□□ 1.26
SBDS-205ENST00000617799 SBF2Q86WG5 1849 aa22.92■■□□□ 1.26
SBDS-205ENST00000617799 TNS1Q9HBL0 1735 aaKnown RBP22.92■■□□□ 1.26
SBDS-205ENST00000617799 ACSBG1Q96GR2 724 aa22.92■■□□□ 1.26
SBDS-205ENST00000617799 BCL9O00512 1426 aa22.91■■□□□ 1.26
SBDS-205ENST00000617799 AMOTQ4VCS5 1084 aa22.91■■□□□ 1.26
SBDS-205ENST00000617799 DOT1LQ8TEK3 1739 aa22.91■■□□□ 1.26
SBDS-205ENST00000617799 CYP27B1O15528 508 aa22.9■■□□□ 1.26
SBDS-205ENST00000617799 ZNF530Q6P9A1 599 aaPredicted RBP22.9■■□□□ 1.26
SBDS-205ENST00000617799 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
SBDS-205ENST00000617799 IFNL2Q8IZJ0 200 aa22.89■■□□□ 1.25
SBDS-205ENST00000617799 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
SBDS-205ENST00000617799 SYTL4Q96C24 671 aaPredicted RBP22.88■■□□□ 1.25
SBDS-205ENST00000617799 APBA3O96018 575 aa22.87■■□□□ 1.25
SBDS-205ENST00000617799 PHKG2P15735 406 aa22.87■■□□□ 1.25
SBDS-205ENST00000617799 PRKAR2BP31323 418 aa22.87■■□□□ 1.25
SBDS-205ENST00000617799 BAG6P46379 1132 aa22.87■■□□□ 1.25
SBDS-205ENST00000617799 KAT6BQ8WYB5 2073 aa22.86■■□□□ 1.25
SBDS-205ENST00000617799 BCL11BQ9C0K0 894 aaPredicted RBP22.86■■□□□ 1.25
SBDS-205ENST00000617799 RSPH6AQ9H0K4 717 aa22.86■■□□□ 1.25
SBDS-205ENST00000617799 KCNQ2O43526 872 aa22.85■■□□□ 1.25
SBDS-205ENST00000617799 WDR43Q15061 677 aaKnown RBP eCLIP22.85■■□□□ 1.25
SBDS-205ENST00000617799 FCHSD2O94868 740 aa22.84■■□□□ 1.25
SBDS-205ENST00000617799 NEFMP07197 916 aa22.84■■□□□ 1.25
SBDS-205ENST00000617799 DEFB132Q7Z7B7 95 aa22.84■■□□□ 1.25
SBDS-205ENST00000617799 HSP90AB1P08238 724 aaKnown RBP22.83■■□□□ 1.25
SBDS-205ENST00000617799 PRIM1P49642 420 aaKnown RBP22.83■■□□□ 1.25
SBDS-205ENST00000617799 PTF1AQ7RTS3 328 aa22.83■■□□□ 1.25
SBDS-205ENST00000617799 TOGARAM1Q9Y4F4 1720 aa22.82■■□□□ 1.24
SBDS-205ENST00000617799 BTAF1O14981 1849 aa22.81■■□□□ 1.24
SBDS-205ENST00000617799 NKX1-1Q15270 411 aaPredicted RBP22.81■■□□□ 1.24
SBDS-205ENST00000617799 MTHFSDQ2M296 383 aaKnown RBP22.81■■□□□ 1.24
SBDS-205ENST00000617799 PNNQ9H307 717 aaKnown RBP22.81■■□□□ 1.24
SBDS-205ENST00000617799 EN1Q05925 392 aaPredicted RBP22.8■■□□□ 1.24
SBDS-205ENST00000617799 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
SBDS-205ENST00000617799 MAPK8IP3Q9UPT6 1336 aa22.8■■□□□ 1.24
SBDS-205ENST00000617799 AKAP4Q5JQC9 854 aa22.79■■□□□ 1.24
SBDS-205ENST00000617799 DCAF5Q96JK2 942 aa22.79■■□□□ 1.24
SBDS-205ENST00000617799 PHACTR3Q96KR7 559 aa22.79■■□□□ 1.24
SBDS-205ENST00000617799 MPRIPQ6WCQ1 1025 aa22.78■■□□□ 1.24
SBDS-205ENST00000617799 MRS2Q9HD23 443 aa22.78■■□□□ 1.24
SBDS-205ENST00000617799 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.24
SBDS-205ENST00000617799 ITGB4P16144 1822 aa22.77■■□□□ 1.24
SBDS-205ENST00000617799 KDM6AO15550 1401 aaPredicted RBP22.76■■□□□ 1.23
SBDS-205ENST00000617799 CCER2I3L3R5 266 aa22.76■■□□□ 1.23
SBDS-205ENST00000617799 CCDC184Q52MB2 194 aa22.76■■□□□ 1.23
SBDS-205ENST00000617799 MAP3K5Q99683 1374 aa22.76■■□□□ 1.23
SBDS-205ENST00000617799 EZH2Q15910 746 aaKnown RBP22.75■■□□□ 1.23
SBDS-205ENST00000617799 RGPD3A6NKT7 1758 aaPredicted RBP22.75■■□□□ 1.23
SBDS-205ENST00000617799 RGPD4Q7Z3J3 1758 aa22.75■■□□□ 1.23
SBDS-205ENST00000617799 CABP4P57796 275 aa22.74■■□□□ 1.23
SBDS-205ENST00000617799 SCN11AQ9UI33 1791 aa22.73■■□□□ 1.23
SBDS-205ENST00000617799 GNAT3A8MTJ3 354 aa22.73■■□□□ 1.23
SBDS-205ENST00000617799 PLSCR1O15162 318 aa22.73■■□□□ 1.23
SBDS-205ENST00000617799 CCDC146Q8IYE0 955 aa22.73■■□□□ 1.23
SBDS-205ENST00000617799 CAMKK2Q96RR4 588 aa22.73■■□□□ 1.23
SBDS-205ENST00000617799 ERVV-2B6SEH9 535 aa22.72■■□□□ 1.23
SBDS-205ENST00000617799 ADAMTS8Q9UP79 889 aa22.72■■□□□ 1.23
SBDS-205ENST00000617799 VIRMAQ69YN4 1812 aaKnown RBP22.72■■□□□ 1.23
SBDS-205ENST00000617799 PLEKHF1Q96S99 279 aa22.71■■□□□ 1.23
SBDS-205ENST00000617799 PIGBQ92521 554 aa22.7■■□□□ 1.22
SBDS-205ENST00000617799 RTF1Q92541 710 aaKnown RBP22.7■■□□□ 1.22
SBDS-205ENST00000617799 LGR6Q9HBX8 967 aa22.7■■□□□ 1.22
SBDS-205ENST00000617799 RREB1Q92766 1687 aa22.7■■□□□ 1.22
SBDS-205ENST00000617799 RNMTO43148 476 aaKnown RBP22.69■■□□□ 1.22
SBDS-205ENST00000617799 NFE2L2Q16236 605 aa22.68■■□□□ 1.22
SBDS-205ENST00000617799 TXNRD1Q16881 649 aa22.68■■□□□ 1.22
SBDS-205ENST00000617799 NUP188Q5SRE5 1749 aa22.68■■□□□ 1.22
SBDS-205ENST00000617799 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
SBDS-205ENST00000617799 NFATC2IPQ8NCF5 419 aa22.67■■□□□ 1.22
SBDS-205ENST00000617799 SMARCC1Q92922 1105 aaPredicted RBP22.67■■□□□ 1.22
SBDS-205ENST00000617799 RUNDC1Q96C34 613 aa22.67■■□□□ 1.22
SBDS-205ENST00000617799 ADAMTS7Q9UKP4 1686 aa22.67■■□□□ 1.22
SBDS-205ENST00000617799 TEFQ10587 303 aa22.66■■□□□ 1.22
SBDS-205ENST00000617799 SLC52A2Q9HAB3 445 aa22.66■■□□□ 1.22
SBDS-205ENST00000617799 DLG5Q8TDM6 1919 aa22.66■■□□□ 1.22
SBDS-205ENST00000617799 MRC1P22897 1456 aa22.66■■□□□ 1.22
SBDS-205ENST00000617799 LY75O60449 1722 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms