RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 FAM9BQ8IZU0 186 aa20.77■□□□□ 0.92
PCDHGC3-204ENST00000617222 RGPD1P0DJD0 1748 aa20.77■□□□□ 0.92
PCDHGC3-204ENST00000617222 MEGF6O75095 1541 aa20.77■□□□□ 0.92
PCDHGC3-204ENST00000617222 ZCRB1Q8TBF4 217 aaKnown RBP20.76■□□□□ 0.91
PCDHGC3-204ENST00000617222 DDB1Q16531 1140 aa20.75■□□□□ 0.91
PCDHGC3-204ENST00000617222 PLEKHO1Q53GL0 409 aaPredicted RBP20.75■□□□□ 0.91
PCDHGC3-204ENST00000617222 PNNQ9H307 717 aaKnown RBP20.75■□□□□ 0.91
PCDHGC3-204ENST00000617222 CCDC146Q8IYE0 955 aa20.74■□□□□ 0.91
PCDHGC3-204ENST00000617222 PHACTR3Q96KR7 559 aa20.74■□□□□ 0.91
PCDHGC3-204ENST00000617222 OVOS2A0A0G2JMS6 1433 aa20.73■□□□□ 0.91
PCDHGC3-204ENST00000617222 PLEKHF1Q96S99 279 aa20.73■□□□□ 0.91
PCDHGC3-204ENST00000617222 SPG7Q9UQ90 795 aa20.73■□□□□ 0.91
PCDHGC3-204ENST00000617222 NEFMP07197 916 aa20.72■□□□□ 0.91
PCDHGC3-204ENST00000617222 PDE3BQ13370 1112 aa20.72■□□□□ 0.91
PCDHGC3-204ENST00000617222 AMOTQ4VCS5 1084 aa20.72■□□□□ 0.91
PCDHGC3-204ENST00000617222 DDX54Q8TDD1 881 aaKnown RBP20.72■□□□□ 0.91
PCDHGC3-204ENST00000617222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.72■□□□□ 0.91
PCDHGC3-204ENST00000617222 MTHFSDQ2M296 383 aaKnown RBP20.7■□□□□ 0.9
PCDHGC3-204ENST00000617222 RUNDC1Q96C34 613 aa20.7■□□□□ 0.9
PCDHGC3-204ENST00000617222 ZNF530Q6P9A1 599 aaPredicted RBP20.69■□□□□ 0.9
PCDHGC3-204ENST00000617222 MAPK8IP3Q9UPT6 1336 aa20.69■□□□□ 0.9
PCDHGC3-204ENST00000617222 RGS12O14924 1447 aa20.69■□□□□ 0.9
PCDHGC3-204ENST00000617222 THSD7AQ9UPZ6 1657 aa20.67■□□□□ 0.9
PCDHGC3-204ENST00000617222 CYP27B1O15528 508 aa20.67■□□□□ 0.9
PCDHGC3-204ENST00000617222 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
PCDHGC3-204ENST00000617222 MARCH10Q8NA82 808 aaPredicted RBP20.67■□□□□ 0.9
PCDHGC3-204ENST00000617222 GAS2L2Q8NHY3 880 aa20.67■□□□□ 0.9
PCDHGC3-204ENST00000617222 PLEKHG2Q9H7P9 1386 aa20.67■□□□□ 0.9
PCDHGC3-204ENST00000617222 IFNL2Q8IZJ0 200 aa20.66■□□□□ 0.9
PCDHGC3-204ENST00000617222 PCDH11XQ9BZA7 1347 aa20.66■□□□□ 0.9
PCDHGC3-204ENST00000617222 PCDH11YQ9BZA8 1340 aa20.66■□□□□ 0.9
PCDHGC3-204ENST00000617222 TNS2Q63HR2 1409 aa20.66■□□□□ 0.9
PCDHGC3-204ENST00000617222 PHKG2P15735 406 aa20.65■□□□□ 0.9
PCDHGC3-204ENST00000617222 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
PCDHGC3-204ENST00000617222 FAM182BQ5T319 152 aa20.65■□□□□ 0.9
PCDHGC3-204ENST00000617222 PARP4Q9UKK3 1724 aaKnown RBP20.64■□□□□ 0.9
PCDHGC3-204ENST00000617222 APAF1O14727 1248 aa20.64■□□□□ 0.89
PCDHGC3-204ENST00000617222 WNK3Q9BYP7 1800 aa20.63■□□□□ 0.89
PCDHGC3-204ENST00000617222 SENP3-EIF4A1A0A087X0R7 540 aa20.63■□□□□ 0.89
PCDHGC3-204ENST00000617222 NFE2L2Q16236 605 aa20.63■□□□□ 0.89
PCDHGC3-204ENST00000617222 AKAP4Q5JQC9 854 aa20.63■□□□□ 0.89
PCDHGC3-204ENST00000617222 RRP7AQ9Y3A4 280 aaKnown RBP20.63■□□□□ 0.89
PCDHGC3-204ENST00000617222 TMPOP42166 694 aaKnown RBP20.62■□□□□ 0.89
PCDHGC3-204ENST00000617222 NEUROD2Q15784 382 aa20.62■□□□□ 0.89
PCDHGC3-204ENST00000617222 LRRC37A3O60309 1634 aa20.62■□□□□ 0.89
PCDHGC3-204ENST00000617222 RIPK4P57078 832 aa20.61■□□□□ 0.89
PCDHGC3-204ENST00000617222 GNAT3A8MTJ3 354 aa20.6■□□□□ 0.89
PCDHGC3-204ENST00000617222 HSP90AB1P08238 724 aaKnown RBP20.6■□□□□ 0.89
PCDHGC3-204ENST00000617222 NKX1-1Q15270 411 aaPredicted RBP20.6■□□□□ 0.89
PCDHGC3-204ENST00000617222 MPRIPQ6WCQ1 1025 aa20.6■□□□□ 0.89
PCDHGC3-204ENST00000617222 PKD1L3Q7Z443 1732 aa20.58■□□□□ 0.89
PCDHGC3-204ENST00000617222 FAM196AQ6ZSG2 479 aa20.58■□□□□ 0.89
PCDHGC3-204ENST00000617222 LGR6Q9HBX8 967 aa20.58■□□□□ 0.89
PCDHGC3-204ENST00000617222 MAP3K5Q99683 1374 aa20.58■□□□□ 0.88
PCDHGC3-204ENST00000617222 RNMTO43148 476 aaKnown RBP20.57■□□□□ 0.88
PCDHGC3-204ENST00000617222 RTF1Q92541 710 aaKnown RBP20.57■□□□□ 0.88
PCDHGC3-204ENST00000617222 DCAF5Q96JK2 942 aa20.57■□□□□ 0.88
PCDHGC3-204ENST00000617222 HTATSF1O43719 755 aaKnown RBP20.56■□□□□ 0.88
PCDHGC3-204ENST00000617222 IL17REQ8NFR9 667 aa20.56■□□□□ 0.88
PCDHGC3-204ENST00000617222 ACSBG1Q96GR2 724 aa20.56■□□□□ 0.88
PCDHGC3-204ENST00000617222 SALL2Q9Y467 1007 aaPredicted RBP20.56■□□□□ 0.88
PCDHGC3-204ENST00000617222 BRWD3Q6RI45 1802 aa20.55■□□□□ 0.88
PCDHGC3-204ENST00000617222 DCTN1Q14203 1278 aa20.55■□□□□ 0.88
PCDHGC3-204ENST00000617222 ILDR2Q71H61 639 aa20.55■□□□□ 0.88
PCDHGC3-204ENST00000617222 SHANK3Q9BYB0 1731 aa20.54■□□□□ 0.88
PCDHGC3-204ENST00000617222 PRIM1P49642 420 aaKnown RBP20.54■□□□□ 0.88
PCDHGC3-204ENST00000617222 MCM10Q7L590 875 aa20.54■□□□□ 0.88
PCDHGC3-204ENST00000617222 LMOD3Q0VAK6 560 aa20.53■□□□□ 0.88
PCDHGC3-204ENST00000617222 SYTL4Q96C24 671 aaPredicted RBP20.53■□□□□ 0.88
PCDHGC3-204ENST00000617222 TRIM35Q9UPQ4 493 aa20.53■□□□□ 0.88
PCDHGC3-204ENST00000617222 KDM6AO15550 1401 aaPredicted RBP20.53■□□□□ 0.88
PCDHGC3-204ENST00000617222 ERVV-2B6SEH9 535 aa20.52■□□□□ 0.88
PCDHGC3-204ENST00000617222 KCNQ2O43526 872 aa20.52■□□□□ 0.88
PCDHGC3-204ENST00000617222 CABP4P57796 275 aa20.52■□□□□ 0.88
PCDHGC3-204ENST00000617222 THUMPD2Q9BTF0 503 aaKnown RBP20.52■□□□□ 0.88
PCDHGC3-204ENST00000617222 BCL9O00512 1426 aa20.51■□□□□ 0.87
PCDHGC3-204ENST00000617222 TRIM37O94972 964 aa20.5■□□□□ 0.87
PCDHGC3-204ENST00000617222 NCBP3Q53F19 620 aaKnown RBP20.49■□□□□ 0.87
PCDHGC3-204ENST00000617222 PTF1AQ7RTS3 328 aa20.49■□□□□ 0.87
PCDHGC3-204ENST00000617222 NFATC2IPQ8NCF5 419 aa20.49■□□□□ 0.87
PCDHGC3-204ENST00000617222 SLC52A2Q9HAB3 445 aa20.49■□□□□ 0.87
PCDHGC3-204ENST00000617222 TEFQ10587 303 aa20.48■□□□□ 0.87
PCDHGC3-204ENST00000617222 CCDC27Q2M243 656 aa20.48■□□□□ 0.87
PCDHGC3-204ENST00000617222 TMOD3Q9NYL9 352 aa20.48■□□□□ 0.87
PCDHGC3-204ENST00000617222 CEMIPQ8WUJ3 1361 aa20.47■□□□□ 0.87
PCDHGC3-204ENST00000617222 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
PCDHGC3-204ENST00000617222 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
PCDHGC3-204ENST00000617222 NGEFQ8N5V2 710 aa20.47■□□□□ 0.87
PCDHGC3-204ENST00000617222 PIGBQ92521 554 aa20.47■□□□□ 0.87
PCDHGC3-204ENST00000617222 BCL11BQ9C0K0 894 aaPredicted RBP20.47■□□□□ 0.87
PCDHGC3-204ENST00000617222 TAF7Q15545 349 aaPredicted RBP20.44■□□□□ 0.86
PCDHGC3-204ENST00000617222 KAT6BQ8WYB5 2073 aa20.43■□□□□ 0.86
PCDHGC3-204ENST00000617222 MIS18AQ9NYP9 233 aa20.43■□□□□ 0.86
PCDHGC3-204ENST00000617222 CALD1Q05682 793 aaKnown RBP20.42■□□□□ 0.86
PCDHGC3-204ENST00000617222 LAS1LQ9Y4W2 734 aaKnown RBP20.42■□□□□ 0.86
PCDHGC3-204ENST00000617222 DLG5Q8TDM6 1919 aa20.42■□□□□ 0.86
PCDHGC3-204ENST00000617222 BTBD11A6QL63 1104 aa20.41■□□□□ 0.86
PCDHGC3-204ENST00000617222 SLC39A6Q13433 755 aa20.41■□□□□ 0.86
PCDHGC3-204ENST00000617222 ASAP1Q9ULH1 1129 aa20.41■□□□□ 0.86
PCDHGC3-204ENST00000617222 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms