RNA–Protein interactions for RNA: ENST00000616956.1

SEM1-216, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-216ENST00000616956 MAN1A2O60476 641 aa6.99□□□□□ -1.29
SEM1-216ENST00000616956 PTGIRP43119 386 aa6.99□□□□□ -1.29
SEM1-216ENST00000616956 USP4Q13107 963 aa6.99□□□□□ -1.29
SEM1-216ENST00000616956 MAP7D1Q3KQU3 841 aa6.99□□□□□ -1.29
SEM1-216ENST00000616956 C14orf37Q86TY3 774 aa6.99□□□□□ -1.29
SEM1-216ENST00000616956 SIRT1Q96EB6 747 aa6.99□□□□□ -1.29
SEM1-216ENST00000616956 ZMYND15Q9H091 742 aa6.99□□□□□ -1.29
SEM1-216ENST00000616956 POLMQ9NP87 494 aaPredicted RBP6.99□□□□□ -1.29
SEM1-216ENST00000616956 ZNF777Q9ULD5 760 aaPredicted RBP6.99□□□□□ -1.29
SEM1-216ENST00000616956 SPINT1O43278 529 aa6.98□□□□□ -1.29
SEM1-216ENST00000616956 CYP2U1Q7Z449 544 aa6.98□□□□□ -1.29
SEM1-216ENST00000616956 INSM2Q96T92 566 aaPredicted RBP6.98□□□□□ -1.29
SEM1-216ENST00000616956 TTLL8A6PVC2 850 aa6.97□□□□□ -1.29
SEM1-216ENST00000616956 MEN1O00255 615 aa6.97□□□□□ -1.29
SEM1-216ENST00000616956 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
SEM1-216ENST00000616956 FIGNL2A6NMB9 653 aa6.96□□□□□ -1.3
SEM1-216ENST00000616956 SOBPA7XYQ1 873 aa6.96□□□□□ -1.3
SEM1-216ENST00000616956 CTSOP43234 321 aaPredicted RBP6.96□□□□□ -1.3
SEM1-216ENST00000616956 EML3Q32P44 896 aa6.96□□□□□ -1.3
SEM1-216ENST00000616956 DEPDC4Q8N2C3 294 aa6.96□□□□□ -1.3
SEM1-216ENST00000616956 NFATC2IPQ8NCF5 419 aa6.96□□□□□ -1.3
SEM1-216ENST00000616956 ARHGEF10LQ9HCE6 1279 aa6.96□□□□□ -1.3
SEM1-216ENST00000616956 CHIC2Q9UKJ5 165 aa6.96□□□□□ -1.3
SEM1-216ENST00000616956 A0A1W2PRU2 124 aa6.95□□□□□ -1.3
SEM1-216ENST00000616956 USP17L5A8MUK1 530 aa6.95□□□□□ -1.3
SEM1-216ENST00000616956 TBC1D9Q6ZT07 1266 aa6.95□□□□□ -1.3
SEM1-216ENST00000616956 KDF1Q8NAX2 398 aaPredicted RBP6.95□□□□□ -1.3
SEM1-216ENST00000616956 NLRP3Q96P20 1036 aa6.95□□□□□ -1.3
SEM1-216ENST00000616956 UCN2Q96RP3 112 aa6.95□□□□□ -1.3
SEM1-216ENST00000616956 RAB6BQ9NRW1 208 aa6.95□□□□□ -1.3
SEM1-216ENST00000616956 SOS2Q07890 1332 aaPredicted RBP6.95□□□□□ -1.3
SEM1-216ENST00000616956 GNRH1P01148 92 aa6.94□□□□□ -1.3
SEM1-216ENST00000616956 NCOA4Q13772 614 aa6.94□□□□□ -1.3
SEM1-216ENST00000616956 DNMT3LQ9UJW3 386 aa6.94□□□□□ -1.3
SEM1-216ENST00000616956 USP17L3A6NCW0 530 aa6.93□□□□□ -1.3
SEM1-216ENST00000616956 USP17L4A6NCW7 530 aa6.93□□□□□ -1.3
SEM1-216ENST00000616956 ATP9BO43861 1147 aa6.93□□□□□ -1.3
SEM1-216ENST00000616956 PSME1Q06323 249 aa6.93□□□□□ -1.3
SEM1-216ENST00000616956 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.93□□□□□ -1.3
SEM1-216ENST00000616956 USP17L2Q6R6M4 530 aa6.93□□□□□ -1.3
SEM1-216ENST00000616956 USP17L1Q7RTZ2 530 aa6.93□□□□□ -1.3
SEM1-216ENST00000616956 TFIP11Q9UBB9 837 aaKnown RBP6.93□□□□□ -1.3
SEM1-216ENST00000616956 NOD1Q9Y239 953 aa6.93□□□□□ -1.3
SEM1-216ENST00000616956 LZTS3O60299 673 aaPredicted RBP6.92□□□□□ -1.3
SEM1-216ENST00000616956 CLN3Q13286 438 aa6.92□□□□□ -1.3
SEM1-216ENST00000616956 ESCO1Q5FWF5 840 aa6.92□□□□□ -1.3
SEM1-216ENST00000616956 SLC27A3Q5K4L6 730 aa6.92□□□□□ -1.3
SEM1-216ENST00000616956 PALM3A6NDB9 673 aaPredicted RBP6.91□□□□□ -1.3
SEM1-216ENST00000616956 STAU1O95793 577 aaKnown RBP6.91□□□□□ -1.3
SEM1-216ENST00000616956 FOXD4L5Q5VV16 416 aaPredicted RBP6.91□□□□□ -1.3
SEM1-216ENST00000616956 PRICKLE2Q7Z3G6 844 aa6.91□□□□□ -1.3
SEM1-216ENST00000616956 RNF217Q8TC41 542 aa6.91□□□□□ -1.3
SEM1-216ENST00000616956 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
SEM1-216ENST00000616956 ZNF775Q96BV0 537 aaPredicted RBP6.91□□□□□ -1.3
SEM1-216ENST00000616956 RNF144AP50876 292 aaPredicted RBP6.9□□□□□ -1.3
SEM1-216ENST00000616956 GTF2IP78347 998 aa6.9□□□□□ -1.3
SEM1-216ENST00000616956 LYSMD3Q7Z3D4 306 aa6.9□□□□□ -1.3
SEM1-216ENST00000616956 TRIM50Q86XT4 487 aa6.9□□□□□ -1.3
SEM1-216ENST00000616956 PPP1R12CQ9BZL4 782 aa6.9□□□□□ -1.3
SEM1-216ENST00000616956 IL2RAP01589 272 aa6.89□□□□□ -1.31
SEM1-216ENST00000616956 GTF2E1P29083 439 aaPredicted RBP6.89□□□□□ -1.31
SEM1-216ENST00000616956 LMOD1P29536 600 aaPredicted RBP6.89□□□□□ -1.31
SEM1-216ENST00000616956 GDF10P55107 478 aa6.89□□□□□ -1.31
SEM1-216ENST00000616956 PLEKHM2Q8IWE5 1019 aa6.89□□□□□ -1.31
SEM1-216ENST00000616956 ESYT1Q9BSJ8 1104 aa6.89□□□□□ -1.31
SEM1-216ENST00000616956 ETNK1Q9HBU6 452 aa6.89□□□□□ -1.31
SEM1-216ENST00000616956 MKRN1Q9UHC7 482 aaKnown RBP6.89□□□□□ -1.31
SEM1-216ENST00000616956 MAFBQ9Y5Q3 323 aaPredicted RBP6.89□□□□□ -1.31
SEM1-216ENST00000616956 ARID3CA6NKF2 412 aa6.88□□□□□ -1.31
SEM1-216ENST00000616956 RHOQP17081 205 aa6.88□□□□□ -1.31
SEM1-216ENST00000616956 GPC1P35052 558 aa6.88□□□□□ -1.31
SEM1-216ENST00000616956 VEGFBP49765 207 aa6.88□□□□□ -1.31
SEM1-216ENST00000616956 CENPCQ03188 943 aa6.88□□□□□ -1.31
SEM1-216ENST00000616956 PTSQ03393 145 aa6.88□□□□□ -1.31
SEM1-216ENST00000616956 ERICH6Q7L0X2 663 aa6.88□□□□□ -1.31
SEM1-216ENST00000616956 NXF1Q9UBU9 619 aaKnown RBP6.88□□□□□ -1.31
SEM1-216ENST00000616956 SERTAD1Q9UHV2 236 aa6.88□□□□□ -1.31
SEM1-216ENST00000616956 PCDHGA11Q9Y5H2 935 aa6.88□□□□□ -1.31
SEM1-216ENST00000616956 TERTO14746 1132 aaKnown RBP6.87□□□□□ -1.31
SEM1-216ENST00000616956 ATP1A2P50993 1020 aa6.87□□□□□ -1.31
SEM1-216ENST00000616956 TLR1Q15399 786 aa6.87□□□□□ -1.31
SEM1-216ENST00000616956 TMEM214Q6NUQ4 689 aaKnown RBP6.87□□□□□ -1.31
SEM1-216ENST00000616956 XAGE2Q96GT9 111 aa6.87□□□□□ -1.31
SEM1-216ENST00000616956 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
SEM1-216ENST00000616956 RBM19Q9Y4C8 960 aaKnown RBP6.87□□□□□ -1.31
SEM1-216ENST00000616956 INHAP05111 366 aa6.86□□□□□ -1.31
SEM1-216ENST00000616956 RFX1P22670 979 aa6.86□□□□□ -1.31
SEM1-216ENST00000616956 SCNN1DP51172 638 aa6.86□□□□□ -1.31
SEM1-216ENST00000616956 POU4F2Q12837 409 aa6.86□□□□□ -1.31
SEM1-216ENST00000616956 OGFOD1Q8N543 542 aa6.86□□□□□ -1.31
SEM1-216ENST00000616956 TPCN2Q8NHX9 752 aa6.86□□□□□ -1.31
SEM1-216ENST00000616956 SLC16A10Q8TF71 515 aa6.86□□□□□ -1.31
SEM1-216ENST00000616956 CCDC97Q96F63 343 aaPredicted RBP6.86□□□□□ -1.31
SEM1-216ENST00000616956 ZNF594Q96JF6 807 aaPredicted RBP6.86□□□□□ -1.31
SEM1-216ENST00000616956 GRIP2Q9C0E4 1043 aa6.86□□□□□ -1.31
SEM1-216ENST00000616956 DNAAF2Q9NVR5 837 aaKnown RBP6.86□□□□□ -1.31
SEM1-216ENST00000616956 RASA1P20936 1047 aa6.85□□□□□ -1.31
SEM1-216ENST00000616956 CLDN10P78369 228 aa6.85□□□□□ -1.31
SEM1-216ENST00000616956 GNASQ5JWF2 1037 aa6.85□□□□□ -1.31
SEM1-216ENST00000616956 TMEM229AB2RXF0 380 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms