RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ZDHHC9Q9Y397 364 aa19.09■□□□□ 0.65
GPN1-212ENST00000616939 MINK1Q8N4C8 1332 aaPredicted RBP19.09■□□□□ 0.65
GPN1-212ENST00000616939 SETD1AO15047 1707 aaKnown RBP19.09■□□□□ 0.65
GPN1-212ENST00000616939 NEO1Q92859 1461 aa19.09■□□□□ 0.65
GPN1-212ENST00000616939 DYNC1I1O14576 645 aa19.09■□□□□ 0.65
GPN1-212ENST00000616939 SAFB2Q14151 953 aaKnown RBP eCLIP19.09■□□□□ 0.65
GPN1-212ENST00000616939 NCLP19338 710 aaKnown RBP19.08■□□□□ 0.64
GPN1-212ENST00000616939 IL13P35225 146 aa19.08■□□□□ 0.64
GPN1-212ENST00000616939 MCM2P49736 904 aa19.08■□□□□ 0.64
GPN1-212ENST00000616939 PRAM1Q96QH2 718 aa19.08■□□□□ 0.64
GPN1-212ENST00000616939 EDC4Q6P2E9 1401 aaKnown RBP19.08■□□□□ 0.64
GPN1-212ENST00000616939 RIMBP3CA6NJZ7 1639 aa19.08■□□□□ 0.64
GPN1-212ENST00000616939 RIMBP3BA6NNM3 1639 aa19.08■□□□□ 0.64
GPN1-212ENST00000616939 RIMBP3Q9UFD9 1639 aa19.08■□□□□ 0.64
GPN1-212ENST00000616939 R3HCC1Q9Y3T6 440 aaKnown RBP19.07■□□□□ 0.64
GPN1-212ENST00000616939 PRPF40AO75400 957 aaKnown RBP19.07■□□□□ 0.64
GPN1-212ENST00000616939 SDSP20132 328 aa19.07■□□□□ 0.64
GPN1-212ENST00000616939 CDK19Q9BWU1 502 aa19.07■□□□□ 0.64
GPN1-212ENST00000616939 AKAP12Q02952 1782 aa19.06■□□□□ 0.64
GPN1-212ENST00000616939 IDI1Q13907 227 aa19.06■□□□□ 0.64
GPN1-212ENST00000616939 C8orf58Q8NAV2 365 aa19.06■□□□□ 0.64
GPN1-212ENST00000616939 OSBPL3Q9H4L5 887 aa19.06■□□□□ 0.64
GPN1-212ENST00000616939 RTL1A6NKG5 1358 aa19.05■□□□□ 0.64
GPN1-212ENST00000616939 KIAA0232Q92628 1395 aa19.05■□□□□ 0.64
GPN1-212ENST00000616939 ERC2O15083 957 aa19.05■□□□□ 0.64
GPN1-212ENST00000616939 PKP1Q13835 747 aa19.05■□□□□ 0.64
GPN1-212ENST00000616939 CEP85Q6P2H3 762 aa19.05■□□□□ 0.64
GPN1-212ENST00000616939 SASS6Q6UVJ0 657 aa19.05■□□□□ 0.64
GPN1-212ENST00000616939 IL17RAQ96F46 866 aa19.05■□□□□ 0.64
GPN1-212ENST00000616939 TMEM63CQ9P1W3 806 aa19.05■□□□□ 0.64
GPN1-212ENST00000616939 STK26Q9P289 416 aa19.05■□□□□ 0.64
GPN1-212ENST00000616939 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
GPN1-212ENST00000616939 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
GPN1-212ENST00000616939 RICTORQ6R327 1708 aa19.04■□□□□ 0.64
GPN1-212ENST00000616939 PTPRCP08575 1304 aa19.04■□□□□ 0.64
GPN1-212ENST00000616939 UQCRHLA0A096LP55 91 aa19.04■□□□□ 0.64
GPN1-212ENST00000616939 UQCRHP07919 91 aa19.04■□□□□ 0.64
GPN1-212ENST00000616939 ZGPATQ8N5A5 531 aaKnown RBP19.04■□□□□ 0.64
GPN1-212ENST00000616939 C3P01024 1663 aa19.03■□□□□ 0.64
GPN1-212ENST00000616939 CUL4AQ13619 759 aa19.03■□□□□ 0.64
GPN1-212ENST00000616939 CABP1Q9NZU7 370 aa19.03■□□□□ 0.64
GPN1-212ENST00000616939 RBM27Q9P2N5 1060 aaKnown RBP19.03■□□□□ 0.64
GPN1-212ENST00000616939 N4BP2Q86UW6 1770 aaPredicted RBP19.03■□□□□ 0.64
GPN1-212ENST00000616939 SSH2Q76I76 1423 aa19.03■□□□□ 0.64
GPN1-212ENST00000616939 BRD1O95696 1058 aa19.02■□□□□ 0.64
GPN1-212ENST00000616939 KLHL34Q8N239 644 aa19.02■□□□□ 0.64
GPN1-212ENST00000616939 ITSN1Q15811 1721 aa19.02■□□□□ 0.64
GPN1-212ENST00000616939 SYAP1Q96A49 352 aaPredicted RBP19.02■□□□□ 0.63
GPN1-212ENST00000616939 INTS4Q96HW7 963 aaKnown RBP19.02■□□□□ 0.63
GPN1-212ENST00000616939 HMOX1P09601 288 aa19.01■□□□□ 0.63
GPN1-212ENST00000616939 XPCQ01831 940 aaPredicted RBP19.01■□□□□ 0.63
GPN1-212ENST00000616939 C16orf71Q8IYS4 520 aaPredicted RBP19.01■□□□□ 0.63
GPN1-212ENST00000616939 ANAPC15P60006 121 aa19■□□□□ 0.63
GPN1-212ENST00000616939 MSH6P52701 1360 aa19■□□□□ 0.63
GPN1-212ENST00000616939 UVSSAQ2YD98 709 aa19■□□□□ 0.63
GPN1-212ENST00000616939 SYCE3A1L190 88 aa18.99■□□□□ 0.63
GPN1-212ENST00000616939 HMMRO75330 724 aa18.99■□□□□ 0.63
GPN1-212ENST00000616939 OTUD7AQ8TE49 926 aaPredicted RBP18.99■□□□□ 0.63
GPN1-212ENST00000616939 TSPY26PQ9H489 355 aa18.99■□□□□ 0.63
GPN1-212ENST00000616939 ELL2O00472 640 aaPredicted RBP18.98■□□□□ 0.63
GPN1-212ENST00000616939 EPB41L2O43491 1005 aaKnown RBP18.98■□□□□ 0.63
GPN1-212ENST00000616939 SMAP1Q8IYB5 467 aaPredicted RBP18.98■□□□□ 0.63
GPN1-212ENST00000616939 RGPD1P0DJD0 1748 aa18.98■□□□□ 0.63
GPN1-212ENST00000616939 PHF14O94880 888 aa18.97■□□□□ 0.63
GPN1-212ENST00000616939 FAM184AQ8NB25 1140 aa18.97■□□□□ 0.63
GPN1-212ENST00000616939 TMX3Q96JJ7 454 aa18.97■□□□□ 0.63
GPN1-212ENST00000616939 RBM10P98175 930 aaKnown RBP18.97■□□□□ 0.63
GPN1-212ENST00000616939 MCCP23508 829 aa18.96■□□□□ 0.63
GPN1-212ENST00000616939 KIAA2012Q0VF49 1180 aa18.96■□□□□ 0.63
GPN1-212ENST00000616939 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
GPN1-212ENST00000616939 FAM13BQ9NYF5 915 aa18.95■□□□□ 0.62
GPN1-212ENST00000616939 NSFL1CQ9UNZ2 370 aaKnown RBP18.95■□□□□ 0.62
GPN1-212ENST00000616939 SALL3Q9BXA9 1300 aa18.95■□□□□ 0.62
GPN1-212ENST00000616939 CHL1O00533 1208 aa18.95■□□□□ 0.62
GPN1-212ENST00000616939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.95■□□□□ 0.62
GPN1-212ENST00000616939 CACNA1FO60840 1977 aa18.94■□□□□ 0.62
GPN1-212ENST00000616939 PDE1AP54750 535 aa18.94■□□□□ 0.62
GPN1-212ENST00000616939 TMEM87AQ8NBN3 555 aa18.94■□□□□ 0.62
GPN1-212ENST00000616939 PRDM4Q9UKN5 801 aa18.94■□□□□ 0.62
GPN1-212ENST00000616939 ARHGEF10O15013 1369 aa18.94■□□□□ 0.62
GPN1-212ENST00000616939 NALCNQ8IZF0 1738 aa18.93■□□□□ 0.62
GPN1-212ENST00000616939 SPATA31D1Q6ZQQ2 1576 aa18.93■□□□□ 0.62
GPN1-212ENST00000616939 SMARCA5O60264 1052 aaPredicted RBP18.93■□□□□ 0.62
GPN1-212ENST00000616939 MYRIPQ8NFW9 859 aa18.93■□□□□ 0.62
GPN1-212ENST00000616939 PRIMPOLQ96LW4 560 aa18.93■□□□□ 0.62
GPN1-212ENST00000616939 ESYT1Q9BSJ8 1104 aa18.93■□□□□ 0.62
GPN1-212ENST00000616939 CPS1P31327 1500 aa18.92■□□□□ 0.62
GPN1-212ENST00000616939 NEK4P51957 841 aa18.92■□□□□ 0.62
GPN1-212ENST00000616939 MEIS3Q99687 375 aa18.91■□□□□ 0.62
GPN1-212ENST00000616939 XRN1Q8IZH2 1706 aaKnown RBP18.91■□□□□ 0.62
GPN1-212ENST00000616939 FAM208AQ9UK61 1670 aaKnown RBP18.91■□□□□ 0.62
GPN1-212ENST00000616939 GTF2F1P35269 517 aaKnown RBP eCLIP18.9■□□□□ 0.62
GPN1-212ENST00000616939 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
GPN1-212ENST00000616939 AOX1Q06278 1338 aa18.9■□□□□ 0.62
GPN1-212ENST00000616939 CCT4P50991 539 aaKnown RBP18.9■□□□□ 0.62
GPN1-212ENST00000616939 HMGN5P82970 282 aaKnown RBP18.9■□□□□ 0.62
GPN1-212ENST00000616939 TCHHQ07283 1943 aa18.89■□□□□ 0.62
GPN1-212ENST00000616939 FAM83GA6ND36 823 aa18.89■□□□□ 0.61
GPN1-212ENST00000616939 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
GPN1-212ENST00000616939 LETM1O95202 739 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms