RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 PAF1Q8N7H5 531 aa20.94■□□□□ 0.94
ATXN2-227ENST00000616825 CIZ1Q9ULV3 898 aaPredicted RBP20.94■□□□□ 0.94
ATXN2-227ENST00000616825 PPFIBP1Q86W92 1011 aa20.93■□□□□ 0.94
ATXN2-227ENST00000616825 PPP6R1Q9UPN7 881 aa20.93■□□□□ 0.94
ATXN2-227ENST00000616825 IDH1O75874 414 aaKnown RBP20.93■□□□□ 0.94
ATXN2-227ENST00000616825 BMP2KQ9NSY1 1161 aaPredicted RBP20.93■□□□□ 0.94
ATXN2-227ENST00000616825 PDRG1Q9NUG6 133 aa20.93■□□□□ 0.94
ATXN2-227ENST00000616825 EFCAB5A4FU69 1503 aa20.93■□□□□ 0.94
ATXN2-227ENST00000616825 HMGB2P26583 209 aaKnown RBP20.93■□□□□ 0.94
ATXN2-227ENST00000616825 MAP7D2Q96T17 732 aa20.93■□□□□ 0.94
ATXN2-227ENST00000616825 EXOC6BQ9Y2D4 811 aa20.93■□□□□ 0.94
ATXN2-227ENST00000616825 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
ATXN2-227ENST00000616825 IGHMBP2P38935 993 aaKnown RBP20.92■□□□□ 0.94
ATXN2-227ENST00000616825 RBM5P52756 815 aaKnown RBP eCLIP20.92■□□□□ 0.941e-6■■□□□ 13.4
ATXN2-227ENST00000616825 SLFN5Q08AF3 891 aa20.92■□□□□ 0.94
ATXN2-227ENST00000616825 DUSP27Q5VZP5 1158 aa20.92■□□□□ 0.94
ATXN2-227ENST00000616825 ZSCAN29Q8IWY8 852 aaPredicted RBP20.92■□□□□ 0.94
ATXN2-227ENST00000616825 KIF1BPQ96EK5 621 aa20.92■□□□□ 0.94
ATXN2-227ENST00000616825 EHBP1L1Q8N3D4 1523 aa20.92■□□□□ 0.94
ATXN2-227ENST00000616825 TMEM57Q8N5G2 664 aa20.92■□□□□ 0.94
ATXN2-227ENST00000616825 PTCD1O75127 700 aaKnown RBP20.91■□□□□ 0.94
ATXN2-227ENST00000616825 DCTN1Q14203 1278 aa20.91■□□□□ 0.94
ATXN2-227ENST00000616825 CCDC85AQ96PX6 553 aaPredicted RBP20.91■□□□□ 0.94
ATXN2-227ENST00000616825 GLRX3O76003 335 aaKnown RBP20.9■□□□□ 0.94
ATXN2-227ENST00000616825 SPC24Q8NBT2 197 aa20.9■□□□□ 0.94
ATXN2-227ENST00000616825 PRXQ9BXM0 1461 aa20.9■□□□□ 0.94
ATXN2-227ENST00000616825 ABCF2Q9UG63 623 aa20.9■□□□□ 0.94
ATXN2-227ENST00000616825 LARP1Q6PKG0 1096 aaKnown RBP20.9■□□□□ 0.94
ATXN2-227ENST00000616825 SPATA32Q96LK8 384 aa20.9■□□□□ 0.94
ATXN2-227ENST00000616825 CCDC184Q52MB2 194 aa20.9■□□□□ 0.94
ATXN2-227ENST00000616825 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
ATXN2-227ENST00000616825 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.94
ATXN2-227ENST00000616825 DEF6Q9H4E7 631 aa20.88■□□□□ 0.93
ATXN2-227ENST00000616825 SSBP05455 408 aaKnown RBP eCLIP20.88■□□□□ 0.93
ATXN2-227ENST00000616825 CEP57L1Q8IYX8 460 aa20.88■□□□□ 0.93
ATXN2-227ENST00000616825 AIDAQ96BJ3 306 aa20.88■□□□□ 0.93
ATXN2-227ENST00000616825 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
ATXN2-227ENST00000616825 DAPK1P53355 1430 aa20.88■□□□□ 0.93
ATXN2-227ENST00000616825 METTL24Q5JXM2 366 aa20.87■□□□□ 0.93
ATXN2-227ENST00000616825 IMMTQ16891 758 aaKnown RBP20.87■□□□□ 0.93
ATXN2-227ENST00000616825 WAPLQ7Z5K2 1190 aa20.87■□□□□ 0.93
ATXN2-227ENST00000616825 MCM10Q7L590 875 aa20.87■□□□□ 0.93
ATXN2-227ENST00000616825 WASF1Q92558 559 aa20.87■□□□□ 0.93
ATXN2-227ENST00000616825 BICDL1Q6ZP65 573 aa20.87■□□□□ 0.93
ATXN2-227ENST00000616825 TANGO6Q9C0B7 1094 aa20.87■□□□□ 0.93
ATXN2-227ENST00000616825 MIS18AQ9NYP9 233 aa20.87■□□□□ 0.93
ATXN2-227ENST00000616825 AKAP2Q9Y2D5 859 aa20.86■□□□□ 0.93
ATXN2-227ENST00000616825 U3KPZ7 1027 aaPredicted RBP20.86■□□□□ 0.93
ATXN2-227ENST00000616825 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
ATXN2-227ENST00000616825 NOM1Q5C9Z4 860 aaKnown RBP20.86■□□□□ 0.93
ATXN2-227ENST00000616825 TXLNBQ8N3L3 684 aa20.85■□□□□ 0.93
ATXN2-227ENST00000616825 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
ATXN2-227ENST00000616825 ZNF652Q9Y2D9 606 aa20.85■□□□□ 0.93
ATXN2-227ENST00000616825 TMOD2Q9NZR1 351 aa20.85■□□□□ 0.93
ATXN2-227ENST00000616825 NESP48681 1621 aa20.85■□□□□ 0.93
ATXN2-227ENST00000616825 IFIT1P09914 478 aaKnown RBP20.84■□□□□ 0.93
ATXN2-227ENST00000616825 NUTM1Q86Y26 1132 aa20.84■□□□□ 0.93
ATXN2-227ENST00000616825 SSH1Q8WYL5 1049 aa20.84■□□□□ 0.93
ATXN2-227ENST00000616825 NUP62CLQ9H1M0 184 aa20.84■□□□□ 0.93
ATXN2-227ENST00000616825 MCM4P33991 863 aa20.84■□□□□ 0.93
ATXN2-227ENST00000616825 CBFA2T2O43439 604 aa20.84■□□□□ 0.93
ATXN2-227ENST00000616825 RAB11FIP3O75154 756 aa20.84■□□□□ 0.93
ATXN2-227ENST00000616825 H0YHG0 523 aa20.83■□□□□ 0.93
ATXN2-227ENST00000616825 ERLIN2O94905 339 aa20.83■□□□□ 0.93
ATXN2-227ENST00000616825 MX1P20591 662 aa20.83■□□□□ 0.93
ATXN2-227ENST00000616825 AXDND1Q5T1B0 1012 aaPredicted RBP20.83■□□□□ 0.92
ATXN2-227ENST00000616825 ZNF287Q9HBT7 754 aa20.83■□□□□ 0.92
ATXN2-227ENST00000616825 ABCC11Q96J66 1382 aa20.83■□□□□ 0.92
ATXN2-227ENST00000616825 PIP4K2BP78356 416 aa20.82■□□□□ 0.92
ATXN2-227ENST00000616825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.82■□□□□ 0.926e-7■■■□□ 17.1
ATXN2-227ENST00000616825 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
ATXN2-227ENST00000616825 ALDH1L2Q3SY69 923 aa20.82■□□□□ 0.92
ATXN2-227ENST00000616825 TMOD3Q9NYL9 352 aa20.82■□□□□ 0.92
ATXN2-227ENST00000616825 UPF3BQ9BZI7 483 aaKnown RBP20.82■□□□□ 0.92
ATXN2-227ENST00000616825 TOPBP1Q92547 1522 aa20.81■□□□□ 0.92
ATXN2-227ENST00000616825 CASTP20810 708 aaKnown RBP20.81■□□□□ 0.92
ATXN2-227ENST00000616825 DDX11Q96FC9 970 aa20.81■□□□□ 0.92
ATXN2-227ENST00000616825 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
ATXN2-227ENST00000616825 FOXO3O43524 673 aa20.81■□□□□ 0.92
ATXN2-227ENST00000616825 CCDC112Q8NEF3 446 aa20.81■□□□□ 0.92
ATXN2-227ENST00000616825 FILIP1Q7Z7B0 1213 aa20.81■□□□□ 0.92
ATXN2-227ENST00000616825 MPNDQ8N594 471 aa20.81■□□□□ 0.92
ATXN2-227ENST00000616825 PHF8Q9UPP1 1060 aa20.8■□□□□ 0.92
ATXN2-227ENST00000616825 NEFHP12036 1026 aa20.8■□□□□ 0.92
ATXN2-227ENST00000616825 RARSP54136 660 aaKnown RBP20.8■□□□□ 0.92
ATXN2-227ENST00000616825 CCDC191Q8NCU4 936 aa20.8■□□□□ 0.92
ATXN2-227ENST00000616825 CCDC181Q5TID7 509 aa20.8■□□□□ 0.92
ATXN2-227ENST00000616825 ZNF76P36508 570 aa20.8■□□□□ 0.92
ATXN2-227ENST00000616825 GRPEL1Q9HAV7 217 aa20.8■□□□□ 0.92
ATXN2-227ENST00000616825 CAVIN4Q5BKX8 364 aa20.79■□□□□ 0.92
ATXN2-227ENST00000616825 CWC15Q9P013 229 aaKnown RBP20.79■□□□□ 0.92
ATXN2-227ENST00000616825 SKIDA1Q1XH10 827 aa20.79■□□□□ 0.92
ATXN2-227ENST00000616825 FERMT3Q86UX7 667 aa20.79■□□□□ 0.92
ATXN2-227ENST00000616825 NME9Q86XW9 330 aa20.79■□□□□ 0.92
ATXN2-227ENST00000616825 BOLA2Q9H3K6 86 aa20.79■□□□□ 0.92
ATXN2-227ENST00000616825 SPINK5Q9NQ38 1064 aaPredicted RBP20.79■□□□□ 0.92
ATXN2-227ENST00000616825 NAIPQ13075 1403 aa20.79■□□□□ 0.92
ATXN2-227ENST00000616825 SNAPC4Q5SXM2 1469 aa20.78■□□□□ 0.92
ATXN2-227ENST00000616825 CCDC196A0A1B0GTZ2 297 aa20.78■□□□□ 0.92
ATXN2-227ENST00000616825 USP5P45974 858 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms