RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 USP54Q70EL1 1684 aa13.26□□□□□ -0.29
LINC00598-207ENST00000616706 AXIN2Q9Y2T1 843 aa13.25□□□□□ -0.29
LINC00598-207ENST00000616706 SLIT3O75094 1523 aa13.25□□□□□ -0.29
LINC00598-207ENST00000616706 NFE2L2Q16236 605 aa13.25□□□□□ -0.29
LINC00598-207ENST00000616706 DZIP1LQ8IYY4 767 aaKnown RBP13.25□□□□□ -0.29
LINC00598-207ENST00000616706 TRIM27P14373 513 aa13.24□□□□□ -0.29
LINC00598-207ENST00000616706 AEBP1Q8IUX7 1158 aa13.24□□□□□ -0.29
LINC00598-207ENST00000616706 EYA1Q99502 592 aa13.24□□□□□ -0.29
LINC00598-207ENST00000616706 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
LINC00598-207ENST00000616706 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
LINC00598-207ENST00000616706 KIAA0232Q92628 1395 aa13.23□□□□□ -0.29
LINC00598-207ENST00000616706 NEFMP07197 916 aa13.23□□□□□ -0.29
LINC00598-207ENST00000616706 FTSJ3Q8IY81 847 aaKnown RBP13.23□□□□□ -0.29
LINC00598-207ENST00000616706 RTL1A6NKG5 1358 aa13.22□□□□□ -0.29
LINC00598-207ENST00000616706 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
LINC00598-207ENST00000616706 ATF7IPQ6VMQ6 1270 aa13.22□□□□□ -0.29
LINC00598-207ENST00000616706 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
LINC00598-207ENST00000616706 THUMPD2Q9BTF0 503 aaKnown RBP13.22□□□□□ -0.29
LINC00598-207ENST00000616706 PRDM11Q9NQV5 511 aa13.22□□□□□ -0.29
LINC00598-207ENST00000616706 LTN1O94822 1766 aa13.21□□□□□ -0.29
LINC00598-207ENST00000616706 NOB1Q9ULX3 412 aaKnown RBP13.21□□□□□ -0.29
LINC00598-207ENST00000616706 AHDC1Q5TGY3 1603 aaPredicted RBP13.21□□□□□ -0.3
LINC00598-207ENST00000616706 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
LINC00598-207ENST00000616706 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
LINC00598-207ENST00000616706 KIF16BQ96L93 1317 aa13.2□□□□□ -0.3
LINC00598-207ENST00000616706 ALDH1L2Q3SY69 923 aa13.2□□□□□ -0.3
LINC00598-207ENST00000616706 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
LINC00598-207ENST00000616706 CSB-PGBD3P0DP91 1061 aa13.19□□□□□ -0.3
LINC00598-207ENST00000616706 NBR1Q14596 966 aa13.19□□□□□ -0.3
LINC00598-207ENST00000616706 FAM83GA6ND36 823 aa13.19□□□□□ -0.3
LINC00598-207ENST00000616706 NUTM2BA6NNL0 878 aaPredicted RBP13.19□□□□□ -0.3
LINC00598-207ENST00000616706 NUTM2EB1AL46 878 aaPredicted RBP13.19□□□□□ -0.3
LINC00598-207ENST00000616706 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
LINC00598-207ENST00000616706 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
LINC00598-207ENST00000616706 DDRGK1Q96HY6 314 aa13.19□□□□□ -0.3
LINC00598-207ENST00000616706 RWDD1Q9H446 243 aaPredicted RBP13.19□□□□□ -0.3
LINC00598-207ENST00000616706 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
LINC00598-207ENST00000616706 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
LINC00598-207ENST00000616706 ZNF853P0CG23 659 aa13.18□□□□□ -0.3
LINC00598-207ENST00000616706 TMEM57Q8N5G2 664 aa13.18□□□□□ -0.3
LINC00598-207ENST00000616706 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
LINC00598-207ENST00000616706 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
LINC00598-207ENST00000616706 PHLPP1O60346 1717 aa13.18□□□□□ -0.3
LINC00598-207ENST00000616706 CPDO75976 1380 aa13.18□□□□□ -0.3
LINC00598-207ENST00000616706 PHRF1Q9P1Y6 1649 aaKnown RBP13.18□□□□□ -0.3
LINC00598-207ENST00000616706 ADAMTS2O95450 1211 aa13.17□□□□□ -0.3
LINC00598-207ENST00000616706 MBIPQ9NS73 344 aa13.17□□□□□ -0.3
LINC00598-207ENST00000616706 NLRP2Q9NX02 1062 aa13.17□□□□□ -0.3
LINC00598-207ENST00000616706 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
LINC00598-207ENST00000616706 GNAI1P63096 354 aa13.17□□□□□ -0.3
LINC00598-207ENST00000616706 CALD1Q05682 793 aaKnown RBP13.17□□□□□ -0.3
LINC00598-207ENST00000616706 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
LINC00598-207ENST00000616706 VAMP4O75379 141 aa13.16□□□□□ -0.3
LINC00598-207ENST00000616706 ERBB3P21860 1342 aa13.16□□□□□ -0.3
LINC00598-207ENST00000616706 EVA1CP58658 441 aa13.16□□□□□ -0.3
LINC00598-207ENST00000616706 ZNF428Q96B54 188 aa13.16□□□□□ -0.3
LINC00598-207ENST00000616706 STRN4Q9NRL3 753 aa13.16□□□□□ -0.3
LINC00598-207ENST00000616706 IPO8O15397 1037 aaKnown RBP13.15□□□□□ -0.3
LINC00598-207ENST00000616706 LMOD3Q0VAK6 560 aa13.15□□□□□ -0.3
LINC00598-207ENST00000616706 CRYBG1Q9Y4K1 1723 aa13.15□□□□□ -0.3
LINC00598-207ENST00000616706 HSPA1LP34931 641 aa13.14□□□□□ -0.31
LINC00598-207ENST00000616706 HDAC1Q13547 482 aaPredicted RBP13.14□□□□□ -0.31
LINC00598-207ENST00000616706 DCTN1Q14203 1278 aa13.14□□□□□ -0.31
LINC00598-207ENST00000616706 MRPL50Q8N5N7 158 aaKnown RBP13.14□□□□□ -0.31
LINC00598-207ENST00000616706 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
LINC00598-207ENST00000616706 ZBTB40Q9NUA8 1239 aa13.14□□□□□ -0.31
LINC00598-207ENST00000616706 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
LINC00598-207ENST00000616706 KDRP35968 1356 aa13.14□□□□□ -0.31
LINC00598-207ENST00000616706 SEC24BO95487 1268 aa13.14□□□□□ -0.31
LINC00598-207ENST00000616706 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
LINC00598-207ENST00000616706 BTG4Q9NY30 223 aa13.14□□□□□ -0.31
LINC00598-207ENST00000616706 RGPD5Q99666 1765 aa13.14□□□□□ -0.31
LINC00598-207ENST00000616706 TOM1L2Q6ZVM7 507 aa13.13□□□□□ -0.31
LINC00598-207ENST00000616706 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
LINC00598-207ENST00000616706 TWISTNBQ3B726 338 aaPredicted RBP13.12□□□□□ -0.31
LINC00598-207ENST00000616706 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
LINC00598-207ENST00000616706 LRRC37A3O60309 1634 aa13.12□□□□□ -0.31
LINC00598-207ENST00000616706 COL18A1P39060 1754 aa13.12□□□□□ -0.31
LINC00598-207ENST00000616706 CAMTA1Q9Y6Y1 1673 aa13.11□□□□□ -0.31
LINC00598-207ENST00000616706 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
LINC00598-207ENST00000616706 LARP1Q6PKG0 1096 aaKnown RBP13.11□□□□□ -0.31
LINC00598-207ENST00000616706 JCADQ9P266 1359 aa13.11□□□□□ -0.31
LINC00598-207ENST00000616706 SMC5Q8IY18 1101 aa13.11□□□□□ -0.31
LINC00598-207ENST00000616706 ARHGAP45Q92619 1136 aa13.11□□□□□ -0.31
LINC00598-207ENST00000616706 ABCC4O15439 1325 aa13.1□□□□□ -0.31
LINC00598-207ENST00000616706 WDR17Q8IZU2 1322 aa13.1□□□□□ -0.31
LINC00598-207ENST00000616706 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
LINC00598-207ENST00000616706 RAPGEF4Q8WZA2 1011 aa13.1□□□□□ -0.31
LINC00598-207ENST00000616706 USP35Q9P2H5 1018 aa13.1□□□□□ -0.31
LINC00598-207ENST00000616706 RGPD2P0DJD1 1756 aa13.1□□□□□ -0.31
LINC00598-207ENST00000616706 ABCA3Q99758 1704 aa13.1□□□□□ -0.31
LINC00598-207ENST00000616706 COL22A1Q8NFW1 1626 aaPredicted RBP13.09□□□□□ -0.31
LINC00598-207ENST00000616706 PLEKHO1Q53GL0 409 aaPredicted RBP13.09□□□□□ -0.31
LINC00598-207ENST00000616706 MCM10Q7L590 875 aa13.09□□□□□ -0.31
LINC00598-207ENST00000616706 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.32
LINC00598-207ENST00000616706 COL5A2P05997 1499 aaPredicted RBP13.08□□□□□ -0.32
LINC00598-207ENST00000616706 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.32
LINC00598-207ENST00000616706 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
LINC00598-207ENST00000616706 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
LINC00598-207ENST00000616706 CRB1P82279 1406 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms