RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 CELA2BP08218 269 aaPredicted RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 CFHP08603 1231 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 KRT13P13646 458 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 NID1P14543 1247 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 PLCG2P16885 1265 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 TACR2P21452 398 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 SKOR1P84550 965 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 E2F1Q01094 437 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 APLP2Q06481 763 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 UBAP2LQ14157 1087 aaKnown RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 KRT32Q14532 448 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 NFE2Q16621 373 aaPredicted RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 MST1LQ2TV78 715 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 PPP1R18Q6NYC8 613 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 LYPD4Q6UWN0 246 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 CBLL1Q75N03 491 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 DNAJC10Q8IXB1 793 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 TMC2Q8TDI7 906 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 STAG1Q8WVM7 1258 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 TAF15Q92804 592 aaKnown RBP eCLIP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 FAM84AQ96KN4 292 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 TMUB1Q9BVT8 246 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 PLA2G12AQ9BZM1 189 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 BRINP2Q9C0B6 783 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 PARD6AQ9NPB6 346 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 TPSG1Q9NRR2 321 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 GAR1Q9NY12 217 aaKnown RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 ZNF112Q9UJU3 913 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 PRRC2AP48634 2157 aaKnown RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 KIAA1109Q2LD37 5005 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 KMT2BQ9UMN6 2715 aaPredicted RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 SRRM2Q9UQ35 2752 aaKnown RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 SCAF1Q9H7N4 1312 aaKnown RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 COL6A6A6NMZ7 2263 aa-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 COL2A1P02458 1487 aaPredicted RBP-0.41□□□□□ -2.48
SOX2-OT-236ENST00000616401 LRP2P98164 4655 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 SORL1Q92673 2214 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 PIK3R2O00459 728 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 SOX1O00570 391 aaPredicted RBP-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 TRAFD1O14545 582 aaPredicted RBP-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 C6P13671 934 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 HOXD9P28356 352 aaPredicted RBP-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 SLC19A1P41440 591 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 KIR3DL1P43629 444 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 HILS1P60008 231 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 TGFB2P61812 414 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 IRX5P78411 483 aaPredicted RBP-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 MESP2Q0VG99 397 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 KIR3DS1Q14943 382 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 COL19A1Q14993 1142 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 NAALADL2Q58DX5 795 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 DGKKQ5KSL6 1271 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 LCE3CQ5T5A8 94 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 GPR153Q6NV75 609 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 C3orf67Q6ZVT6 689 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 ZSWIM9Q86XI8 627 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 NANOS1Q8WY41 292 aaKnown RBP-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 PPP1R16BQ96T49 567 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 CHRDL1Q9BU40 450 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 TOR4AQ9NXH8 423 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 PRR13Q9NZ81 148 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 ZNF581Q9P0T4 197 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 PIM2Q9P1W9 311 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 MKL2Q9ULH7 1088 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 PCDHAC2Q9Y5I4 1007 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 HRNRQ86YZ3 2850 aaPredicted RBP-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 IGSF10Q6WRI0 2623 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 LAMA5O15230 3695 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 CNTNAP4Q9C0A0 1308 aa-0.42□□□□□ -2.48
SOX2-OT-236ENST00000616401 A0A0A6YYK5 440 aaPredicted RBP-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 PRSS47A8MTI9 375 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 SOCS7O14512 581 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 FZD7O75084 574 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 CDK4P11802 303 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 TRHP20396 242 aaPredicted RBP-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 CCKBRP32239 447 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 GGCXP38435 758 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 XGP55808 180 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 KCNQ4P56696 695 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 KRTAP10-10P60014 251 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 SRSF11Q05519 484 aaKnown RBP-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 HYAL1Q12794 435 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 ZKSCAN2Q63HK3 967 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 GDF6Q6KF10 455 aaPredicted RBP-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 RIC3Q7Z5B4 369 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 ANKLE2Q86XL3 938 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 FOXP4Q8IVH2 680 aaPredicted RBP-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 ZFPM1Q8IX07 1006 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 Q8N1X5 172 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 WNT2BQ93097 391 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 COL25A1Q9BXS0 654 aaPredicted RBP-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 ZIM2Q9NZV7 527 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 PALD1Q9ULE6 856 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 CLEC11AQ9Y240 323 aa-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 WDR33Q9C0J8 1336 aaKnown RBP-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 LRP1Q07954 4544 aaKnown RBP-0.43□□□□□ -2.48
SOX2-OT-236ENST00000616401 TTLL13PA6NNM8 815 aa-0.44□□□□□ -2.48
SOX2-OT-236ENST00000616401 TNFRSF10AO00220 468 aa-0.44□□□□□ -2.48
SOX2-OT-236ENST00000616401 DLL1O00548 723 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms