RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 SMG6Q86US8 1419 aaKnown RBP14.95□□□□□ -0.02
PDLIM2-219ENST00000616289 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
PDLIM2-219ENST00000616289 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-219ENST00000616289 FHDC1Q9C0D6 1143 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-219ENST00000616289 KAT6BQ8WYB5 2073 aa14.95□□□□□ -0.02
PDLIM2-219ENST00000616289 NBPF6Q5VWK0 638 aa14.94□□□□□ -0.02
PDLIM2-219ENST00000616289 USHBP1Q8N6Y0 703 aa14.94□□□□□ -0.02
PDLIM2-219ENST00000616289 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
PDLIM2-219ENST00000616289 NBPF4Q96M43 638 aa14.94□□□□□ -0.02
PDLIM2-219ENST00000616289 GOLGB1Q14789 3259 aaKnown RBP14.94□□□□□ -0.02
PDLIM2-219ENST00000616289 COL24A1Q17RW2 1714 aa14.93□□□□□ -0.02
PDLIM2-219ENST00000616289 PRIM1P49642 420 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-219ENST00000616289 KCNQ4P56696 695 aa14.93□□□□□ -0.02
PDLIM2-219ENST00000616289 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
PDLIM2-219ENST00000616289 ZCRB1Q8TBF4 217 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-219ENST00000616289 SYT17Q9BSW7 474 aa14.93□□□□□ -0.02
PDLIM2-219ENST00000616289 INSRP06213 1382 aa14.92□□□□□ -0.02
PDLIM2-219ENST00000616289 FLT4P35916 1363 aa14.92□□□□□ -0.02
PDLIM2-219ENST00000616289 ANKRD26Q9UPS8 1709 aa14.92□□□□□ -0.02
PDLIM2-219ENST00000616289 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
PDLIM2-219ENST00000616289 CDCA8Q53HL2 280 aa14.91□□□□□ -0.02
PDLIM2-219ENST00000616289 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
PDLIM2-219ENST00000616289 ARXQ96QS3 562 aa14.91□□□□□ -0.02
PDLIM2-219ENST00000616289 PNPLA7Q6ZV29 1317 aa14.91□□□□□ -0.02
PDLIM2-219ENST00000616289 KIF24Q5T7B8 1368 aa14.9□□□□□ -0.02
PDLIM2-219ENST00000616289 MAP3K5Q99683 1374 aa14.9□□□□□ -0.02
PDLIM2-219ENST00000616289 CARD14Q9BXL6 1004 aa14.9□□□□□ -0.02
PDLIM2-219ENST00000616289 CGNL1Q0VF96 1302 aa14.9□□□□□ -0.02
PDLIM2-219ENST00000616289 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
PDLIM2-219ENST00000616289 TOGARAM1Q9Y4F4 1720 aa14.89□□□□□ -0.03
PDLIM2-219ENST00000616289 RAPGEF4Q8WZA2 1011 aa14.89□□□□□ -0.03
PDLIM2-219ENST00000616289 C5P01031 1676 aa14.88□□□□□ -0.03
PDLIM2-219ENST00000616289 TATP17735 454 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-219ENST00000616289 TFCP2L1Q9NZI6 479 aa14.87□□□□□ -0.03
PDLIM2-219ENST00000616289 CCNL1Q9UK58 526 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-219ENST00000616289 EMILIN1Q9Y6C2 1016 aa14.87□□□□□ -0.03
PDLIM2-219ENST00000616289 PCDH11XQ9BZA7 1347 aa14.87□□□□□ -0.03
PDLIM2-219ENST00000616289 PCDH11YQ9BZA8 1340 aa14.87□□□□□ -0.03
PDLIM2-219ENST00000616289 NCAPD2Q15021 1401 aa14.86□□□□□ -0.03
PDLIM2-219ENST00000616289 SLC16A10Q8TF71 515 aa14.86□□□□□ -0.03
PDLIM2-219ENST00000616289 ITGB4P16144 1822 aa14.85□□□□□ -0.03
PDLIM2-219ENST00000616289 TAF1LQ8IZX4 1826 aa14.85□□□□□ -0.03
PDLIM2-219ENST00000616289 CYP27B1O15528 508 aa14.84□□□□□ -0.03
PDLIM2-219ENST00000616289 POLD1P28340 1107 aa14.84□□□□□ -0.03
PDLIM2-219ENST00000616289 TIMELESSQ9UNS1 1208 aa14.84□□□□□ -0.03
PDLIM2-219ENST00000616289 CHD4Q14839 1912 aa14.84□□□□□ -0.03
PDLIM2-219ENST00000616289 KLHL34Q8N239 644 aa14.83□□□□□ -0.04
PDLIM2-219ENST00000616289 PALLDQ8WX93 1383 aa14.83□□□□□ -0.04
PDLIM2-219ENST00000616289 MAP2P11137 1827 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-219ENST00000616289 PPM1GO15355 546 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-219ENST00000616289 CLSPNQ9HAW4 1339 aa14.82□□□□□ -0.04
PDLIM2-219ENST00000616289 C4BP0C0L5 1744 aa14.81□□□□□ -0.04
PDLIM2-219ENST00000616289 MPRIPQ6WCQ1 1025 aa14.81□□□□□ -0.04
PDLIM2-219ENST00000616289 COL23A1Q86Y22 540 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-219ENST00000616289 ZNF784Q8NCA9 323 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-219ENST00000616289 NLGN2Q8NFZ4 835 aa14.8□□□□□ -0.04
PDLIM2-219ENST00000616289 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
PDLIM2-219ENST00000616289 WASHC2AQ641Q2 1341 aa14.8□□□□□ -0.04
PDLIM2-219ENST00000616289 MSH5O43196 834 aa14.79□□□□□ -0.04
PDLIM2-219ENST00000616289 POLR3GLQ9BT43 218 aa14.79□□□□□ -0.04
PDLIM2-219ENST00000616289 GPR162Q16538 588 aa14.78□□□□□ -0.04
PDLIM2-219ENST00000616289 MSL1Q68DK7 614 aa14.78□□□□□ -0.04
PDLIM2-219ENST00000616289 EYA1Q99502 592 aa14.78□□□□□ -0.04
PDLIM2-219ENST00000616289 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
PDLIM2-219ENST00000616289 UBR3Q6ZT12 1888 aa14.78□□□□□ -0.04
PDLIM2-219ENST00000616289 NKX1-1Q15270 411 aaPredicted RBP14.77□□□□□ -0.05
PDLIM2-219ENST00000616289 SPG7Q9UQ90 795 aa14.77□□□□□ -0.05
PDLIM2-219ENST00000616289 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-219ENST00000616289 PIGBQ92521 554 aa14.76□□□□□ -0.05
PDLIM2-219ENST00000616289 TNNT2P45379 298 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-219ENST00000616289 EIF4A2Q14240 407 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-219ENST00000616289 AMIGO3Q86WK7 504 aa14.75□□□□□ -0.05
PDLIM2-219ENST00000616289 SMARCC1Q92922 1105 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-219ENST00000616289 AK7Q96M32 723 aa14.74□□□□□ -0.05
PDLIM2-219ENST00000616289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.74□□□□□ -0.05
PDLIM2-219ENST00000616289 HSPA5P11021 654 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-219ENST00000616289 PHKG2P15735 406 aa14.73□□□□□ -0.05
PDLIM2-219ENST00000616289 EIF4G2P78344 907 aaKnown RBP eCLIP14.73□□□□□ -0.05
PDLIM2-219ENST00000616289 FLAD1Q8NFF5 587 aa14.73□□□□□ -0.05
PDLIM2-219ENST00000616289 LOC102724428A0A0B4J2F2 783 aa14.72□□□□□ -0.05
PDLIM2-219ENST00000616289 YBX3P16989 372 aaKnown RBP eCLIP14.72□□□□□ -0.05
PDLIM2-219ENST00000616289 SIK1P57059 783 aa14.72□□□□□ -0.05
PDLIM2-219ENST00000616289 SMIM5Q71RC9 77 aa14.72□□□□□ -0.05
PDLIM2-219ENST00000616289 IFNL2Q8IZJ0 200 aa14.72□□□□□ -0.05
PDLIM2-219ENST00000616289 LINC00116Q8NCU8 138 aa14.72□□□□□ -0.05
PDLIM2-219ENST00000616289 TMOD3Q9NYL9 352 aa14.72□□□□□ -0.05
PDLIM2-219ENST00000616289 PLEKHG2Q9H7P9 1386 aa14.72□□□□□ -0.05
PDLIM2-219ENST00000616289 IGSF1Q8N6C5 1336 aa14.71□□□□□ -0.05
PDLIM2-219ENST00000616289 PHF14O94880 888 aa14.71□□□□□ -0.05
PDLIM2-219ENST00000616289 HMGB2P26583 209 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-219ENST00000616289 PANK3Q9H999 370 aa14.71□□□□□ -0.05
PDLIM2-219ENST00000616289 ASAP1Q9ULH1 1129 aa14.71□□□□□ -0.05
PDLIM2-219ENST00000616289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-219ENST00000616289 ITPK1Q13572 414 aa14.69□□□□□ -0.06
PDLIM2-219ENST00000616289 KDRP35968 1356 aa14.69□□□□□ -0.06
PDLIM2-219ENST00000616289 ZNF831Q5JPB2 1677 aa14.68□□□□□ -0.06
PDLIM2-219ENST00000616289 SSFA2P28290 1259 aa14.68□□□□□ -0.06
PDLIM2-219ENST00000616289 ATG3Q9NT62 314 aa14.68□□□□□ -0.06
PDLIM2-219ENST00000616289 CD2APQ9Y5K6 639 aa14.68□□□□□ -0.06
PDLIM2-219ENST00000616289 COL5A3P25940 1745 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms