RNA–Protein interactions for RNA: ENST00000616206.4

PDE4DIP-241, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2 BASIC

Gene PDE4DIP, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-241ENST00000616206 ABCC3O15438 1527 aa10.61□□□□□ -0.71
PDE4DIP-241ENST00000616206 FAM135AQ9P2D6 1515 aa10.6□□□□□ -0.71
PDE4DIP-241ENST00000616206 SOX11P35716 441 aa10.6□□□□□ -0.71
PDE4DIP-241ENST00000616206 B4GALNT3Q6L9W6 998 aa10.6□□□□□ -0.71
PDE4DIP-241ENST00000616206 TBC1D9Q6ZT07 1266 aa10.6□□□□□ -0.71
PDE4DIP-241ENST00000616206 EPS8L1Q8TE68 723 aa10.6□□□□□ -0.71
PDE4DIP-241ENST00000616206 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDE4DIP-241ENST00000616206 EIF2AK4Q9P2K8 1649 aaKnown RBP10.59□□□□□ -0.71
PDE4DIP-241ENST00000616206 C3orf80F5H4A9 247 aa10.59□□□□□ -0.71
PDE4DIP-241ENST00000616206 HOXA2O43364 376 aa10.59□□□□□ -0.71
PDE4DIP-241ENST00000616206 GUCA2AQ02747 115 aa10.59□□□□□ -0.71
PDE4DIP-241ENST00000616206 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
PDE4DIP-241ENST00000616206 PCDHGC3Q9UN70 934 aa10.59□□□□□ -0.71
PDE4DIP-241ENST00000616206 RNF17Q9BXT8 1623 aaKnown RBP10.58□□□□□ -0.72
PDE4DIP-241ENST00000616206 CROCC2H7BZ55 1655 aa10.58□□□□□ -0.72
PDE4DIP-241ENST00000616206 NLRP1Q9C000 1473 aa10.58□□□□□ -0.72
PDE4DIP-241ENST00000616206 CCER1Q8TC90 406 aaPredicted RBP10.58□□□□□ -0.72
PDE4DIP-241ENST00000616206 TSKSQ9UJT2 592 aa10.58□□□□□ -0.72
PDE4DIP-241ENST00000616206 PNMA3Q9UL41 463 aa10.58□□□□□ -0.72
PDE4DIP-241ENST00000616206 PLA2R1Q13018 1463 aa10.57□□□□□ -0.72
PDE4DIP-241ENST00000616206 COL9A1P20849 921 aa10.57□□□□□ -0.72
PDE4DIP-241ENST00000616206 USP46P62068 366 aa10.57□□□□□ -0.72
PDE4DIP-241ENST00000616206 ANKRD50Q9ULJ7 1429 aa10.57□□□□□ -0.72
PDE4DIP-241ENST00000616206 UGGT1Q9NYU2 1555 aa10.56□□□□□ -0.72
PDE4DIP-241ENST00000616206 ERVK-7P63135 1459 aa10.56□□□□□ -0.72
PDE4DIP-241ENST00000616206 RBM47A0AV96 593 aaKnown RBP10.56□□□□□ -0.72
PDE4DIP-241ENST00000616206 MTMR2Q13614 643 aa10.56□□□□□ -0.72
PDE4DIP-241ENST00000616206 HLA-CQ95604 372 aa10.56□□□□□ -0.72
PDE4DIP-241ENST00000616206 ZNF142P52746 1687 aaPredicted RBP10.56□□□□□ -0.72
PDE4DIP-241ENST00000616206 MROH1Q8NDA8 1641 aa10.55□□□□□ -0.72
PDE4DIP-241ENST00000616206 ZC3H13Q5T200 1668 aaKnown RBP10.55□□□□□ -0.72
PDE4DIP-241ENST00000616206 NBPF26B4DH59 902 aa10.55□□□□□ -0.72
PDE4DIP-241ENST00000616206 ATP9BO43861 1147 aa10.55□□□□□ -0.72
PDE4DIP-241ENST00000616206 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
PDE4DIP-241ENST00000616206 TATDN2Q93075 761 aa10.55□□□□□ -0.72
PDE4DIP-241ENST00000616206 EID1Q9Y6B2 187 aa10.55□□□□□ -0.72
PDE4DIP-241ENST00000616206 ADGRL2O95490 1459 aa10.55□□□□□ -0.72
PDE4DIP-241ENST00000616206 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
PDE4DIP-241ENST00000616206 CEP152O94986 1710 aa10.54□□□□□ -0.72
PDE4DIP-241ENST00000616206 NUDT7P0C024 238 aa10.54□□□□□ -0.72
PDE4DIP-241ENST00000616206 YY1P25490 414 aa10.54□□□□□ -0.72
PDE4DIP-241ENST00000616206 GCGRP47871 477 aa10.54□□□□□ -0.72
PDE4DIP-241ENST00000616206 TXNDC2Q86VQ3 553 aa10.54□□□□□ -0.72
PDE4DIP-241ENST00000616206 PRDM15P57071 1507 aaPredicted RBP10.53□□□□□ -0.72
PDE4DIP-241ENST00000616206 CFAP99D6REC4 459 aa10.53□□□□□ -0.72
PDE4DIP-241ENST00000616206 HMGB1P09429 215 aaKnown RBP10.53□□□□□ -0.72
PDE4DIP-241ENST00000616206 TMEM164Q5U3C3 297 aa10.53□□□□□ -0.72
PDE4DIP-241ENST00000616206 PNMA1Q8ND90 353 aa10.53□□□□□ -0.72
PDE4DIP-241ENST00000616206 CFAP65Q6ZU64 1925 aaKnown RBP10.52□□□□□ -0.72
PDE4DIP-241ENST00000616206 NPHP4O75161 1426 aaPredicted RBP10.52□□□□□ -0.73
PDE4DIP-241ENST00000616206 ARHGAP31Q2M1Z3 1444 aa10.52□□□□□ -0.73
PDE4DIP-241ENST00000616206 IDI1Q13907 227 aa10.52□□□□□ -0.73
PDE4DIP-241ENST00000616206 NR6A1Q15406 480 aa10.52□□□□□ -0.73
PDE4DIP-241ENST00000616206 KHSRPQ92945 711 aaKnown RBP eCLIP10.52□□□□□ -0.73
PDE4DIP-241ENST00000616206 CPS1P31327 1500 aa10.52□□□□□ -0.73
PDE4DIP-241ENST00000616206 POTEFA5A3E0 1075 aa10.51□□□□□ -0.73
PDE4DIP-241ENST00000616206 C6orf229H3BNL8 230 aa10.51□□□□□ -0.73
PDE4DIP-241ENST00000616206 SMAPO00193 183 aa10.51□□□□□ -0.73
PDE4DIP-241ENST00000616206 EIF4G2P78344 907 aaKnown RBP eCLIP10.51□□□□□ -0.73
PDE4DIP-241ENST00000616206 STK32AQ8WU08 396 aa10.51□□□□□ -0.73
PDE4DIP-241ENST00000616206 ZMIZ1Q9ULJ6 1067 aa10.51□□□□□ -0.73
PDE4DIP-241ENST00000616206 NUP155O75694 1391 aa10.51□□□□□ -0.73
PDE4DIP-241ENST00000616206 ROCK1Q13464 1354 aa10.51□□□□□ -0.73
PDE4DIP-241ENST00000616206 LTKP29376 864 aa10.5□□□□□ -0.73
PDE4DIP-241ENST00000616206 EVX2Q03828 476 aa10.5□□□□□ -0.73
PDE4DIP-241ENST00000616206 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
PDE4DIP-241ENST00000616206 MRRFQ96E11 262 aaKnown RBP10.5□□□□□ -0.73
PDE4DIP-241ENST00000616206 DEPDC5O75140 1603 aa10.49□□□□□ -0.73
PDE4DIP-241ENST00000616206 ELOAQ14241 798 aaKnown RBP10.49□□□□□ -0.73
PDE4DIP-241ENST00000616206 SLF2Q8IX21 1173 aa10.49□□□□□ -0.73
PDE4DIP-241ENST00000616206 IGSF5Q9NSI5 407 aa10.49□□□□□ -0.73
PDE4DIP-241ENST00000616206 SLC52A1Q9NWF4 448 aa10.49□□□□□ -0.73
PDE4DIP-241ENST00000616206 NOVA2Q9UNW9 492 aaKnown RBP10.49□□□□□ -0.73
PDE4DIP-241ENST00000616206 RXRBP28702 533 aa10.48□□□□□ -0.73
PDE4DIP-241ENST00000616206 ARSIQ5FYB1 569 aa10.48□□□□□ -0.73
PDE4DIP-241ENST00000616206 PHLDB3Q6NSJ2 640 aa10.48□□□□□ -0.73
PDE4DIP-241ENST00000616206 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.48□□□□□ -0.73
PDE4DIP-241ENST00000616206 KIAA1522Q9P206 1035 aaPredicted RBP10.48□□□□□ -0.73
PDE4DIP-241ENST00000616206 LMTK2Q8IWU2 1503 aa10.48□□□□□ -0.73
PDE4DIP-241ENST00000616206 HSP90B1P14625 803 aaKnown RBP10.47□□□□□ -0.73
PDE4DIP-241ENST00000616206 SLC39A7Q92504 469 aa10.47□□□□□ -0.73
PDE4DIP-241ENST00000616206 TMEM2Q9UHN6 1383 aa10.47□□□□□ -0.73
PDE4DIP-241ENST00000616206 SCAF11Q99590 1463 aaKnown RBP10.47□□□□□ -0.73
PDE4DIP-241ENST00000616206 LRRC7Q96NW7 1537 aa10.47□□□□□ -0.73
PDE4DIP-241ENST00000616206 NEURL4Q96JN8 1562 aa10.47□□□□□ -0.73
PDE4DIP-241ENST00000616206 TRIM6-TRIM34B2RNG4 842 aa10.46□□□□□ -0.73
PDE4DIP-241ENST00000616206 PPP1R3GB7ZBB8 358 aa10.46□□□□□ -0.73
PDE4DIP-241ENST00000616206 ERCC3P19447 782 aa10.46□□□□□ -0.73
PDE4DIP-241ENST00000616206 ARID4AP29374 1257 aaPredicted RBP10.46□□□□□ -0.73
PDE4DIP-241ENST00000616206 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.73
PDE4DIP-241ENST00000616206 SLC26A8Q96RN1 970 aa10.46□□□□□ -0.73
PDE4DIP-241ENST00000616206 MED14O60244 1454 aa10.46□□□□□ -0.74
PDE4DIP-241ENST00000616206 EFCAB6Q5THR3 1501 aa10.46□□□□□ -0.74
PDE4DIP-241ENST00000616206 VWDEQ8N2E2 1590 aa10.46□□□□□ -0.74
PDE4DIP-241ENST00000616206 POLR1AO95602 1720 aaPredicted RBP10.46□□□□□ -0.74
PDE4DIP-241ENST00000616206 CEP350Q5VT06 3117 aa10.45□□□□□ -0.74
PDE4DIP-241ENST00000616206 PIK3CDO00329 1044 aa10.45□□□□□ -0.74
PDE4DIP-241ENST00000616206 DNAJC14Q6Y2X3 702 aaPredicted RBP10.45□□□□□ -0.74
PDE4DIP-241ENST00000616206 UBR1Q8IWV7 1749 aa10.44□□□□□ -0.74
PDE4DIP-241ENST00000616206 PIK3C2BO00750 1634 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms