RNA–Protein interactions for RNA: ENST00000616078.1

LINC01879-202, Transcript of long intergenic non-protein coding RNA 1879, humanhuman

Gene LINC01879, Length 1,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01879-202ENST00000616078 NBPF6Q5VWK0 638 aa18.1■□□□□ 0.49
LINC01879-202ENST00000616078 NBPF4Q96M43 638 aa18.1■□□□□ 0.49
LINC01879-202ENST00000616078 LRRC4BQ9NT99 713 aa18.1■□□□□ 0.49
LINC01879-202ENST00000616078 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
LINC01879-202ENST00000616078 SGIP1Q9BQI5 828 aa18.09■□□□□ 0.49
LINC01879-202ENST00000616078 INSRP06213 1382 aa18.09■□□□□ 0.49
LINC01879-202ENST00000616078 FLT4P35916 1363 aa18.08■□□□□ 0.49
LINC01879-202ENST00000616078 YY1P25490 414 aa18.07■□□□□ 0.48
LINC01879-202ENST00000616078 PRIM1P49642 420 aaKnown RBP18.07■□□□□ 0.48
LINC01879-202ENST00000616078 ZNF827Q17R98 1081 aa18.07■□□□□ 0.48
LINC01879-202ENST00000616078 DOT1LQ8TEK3 1739 aa18.07■□□□□ 0.48
LINC01879-202ENST00000616078 AKT1S1Q96B36 256 aa18.07■□□□□ 0.48
LINC01879-202ENST00000616078 RAPGEF4Q8WZA2 1011 aa18.07■□□□□ 0.48
LINC01879-202ENST00000616078 SYTL4Q96C24 671 aaPredicted RBP18.07■□□□□ 0.48
LINC01879-202ENST00000616078 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
LINC01879-202ENST00000616078 NSD3Q9BZ95 1437 aa18.06■□□□□ 0.48
LINC01879-202ENST00000616078 NSD2O96028 1365 aa18.06■□□□□ 0.48
LINC01879-202ENST00000616078 HSP90AB2PQ58FF8 381 aa18.06■□□□□ 0.48
LINC01879-202ENST00000616078 CCER1Q8TC90 406 aaPredicted RBP18.06■□□□□ 0.48
LINC01879-202ENST00000616078 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
LINC01879-202ENST00000616078 SLC16A10Q8TF71 515 aa18.05■□□□□ 0.48
LINC01879-202ENST00000616078 LY75O60449 1722 aa18.04■□□□□ 0.48
LINC01879-202ENST00000616078 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
LINC01879-202ENST00000616078 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
LINC01879-202ENST00000616078 SYT17Q9BSW7 474 aa18.04■□□□□ 0.48
LINC01879-202ENST00000616078 FHDC1Q9C0D6 1143 aaPredicted RBP18.04■□□□□ 0.48
LINC01879-202ENST00000616078 ARXQ96QS3 562 aa18.03■□□□□ 0.48
LINC01879-202ENST00000616078 MAP3K5Q99683 1374 aa18.03■□□□□ 0.48
LINC01879-202ENST00000616078 PCDH11XQ9BZA7 1347 aa18.02■□□□□ 0.47
LINC01879-202ENST00000616078 PCDH11YQ9BZA8 1340 aa18.02■□□□□ 0.47
LINC01879-202ENST00000616078 PNPLA7Q6ZV29 1317 aa18.01■□□□□ 0.47
LINC01879-202ENST00000616078 TFCP2L1Q9NZI6 479 aa18.01■□□□□ 0.47
LINC01879-202ENST00000616078 EMILIN1Q9Y6C2 1016 aa18.01■□□□□ 0.47
LINC01879-202ENST00000616078 NCAPD2Q15021 1401 aa18■□□□□ 0.47
LINC01879-202ENST00000616078 CCNL1Q9UK58 526 aaPredicted RBP18■□□□□ 0.47
LINC01879-202ENST00000616078 COL24A1Q17RW2 1714 aa17.99■□□□□ 0.47
LINC01879-202ENST00000616078 ANKRD26Q9UPS8 1709 aa17.99■□□□□ 0.47
LINC01879-202ENST00000616078 HMGB2P26583 209 aaKnown RBP17.99■□□□□ 0.47
LINC01879-202ENST00000616078 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
LINC01879-202ENST00000616078 KCNQ4P56696 695 aa17.98■□□□□ 0.47
LINC01879-202ENST00000616078 TUBGCP6Q96RT7 1819 aa17.98■□□□□ 0.47
LINC01879-202ENST00000616078 POLD1P28340 1107 aa17.97■□□□□ 0.47
LINC01879-202ENST00000616078 CYP27B1O15528 508 aa17.96■□□□□ 0.47
LINC01879-202ENST00000616078 PKD1L3Q7Z443 1732 aa17.96■□□□□ 0.47
LINC01879-202ENST00000616078 UTRNP46939 3433 aa17.96■□□□□ 0.47
LINC01879-202ENST00000616078 MAP2P11137 1827 aaKnown RBP17.95■□□□□ 0.46
LINC01879-202ENST00000616078 PPM1GO15355 546 aaPredicted RBP17.95■□□□□ 0.46
LINC01879-202ENST00000616078 NKX1-1Q15270 411 aaPredicted RBP17.94■□□□□ 0.46
LINC01879-202ENST00000616078 POLKQ9UBT6 870 aa17.94■□□□□ 0.46
LINC01879-202ENST00000616078 PALLDQ8WX93 1383 aa17.93■□□□□ 0.46
LINC01879-202ENST00000616078 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
LINC01879-202ENST00000616078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.93■□□□□ 0.46
LINC01879-202ENST00000616078 SPG7Q9UQ90 795 aa17.93■□□□□ 0.46
LINC01879-202ENST00000616078 MPRIPQ6WCQ1 1025 aa17.92■□□□□ 0.46
LINC01879-202ENST00000616078 SMARCC1Q92922 1105 aaPredicted RBP17.92■□□□□ 0.46
LINC01879-202ENST00000616078 EYA1Q99502 592 aa17.92■□□□□ 0.46
LINC01879-202ENST00000616078 C5P01031 1676 aa17.92■□□□□ 0.46
LINC01879-202ENST00000616078 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
LINC01879-202ENST00000616078 ITGB4P16144 1822 aa17.91■□□□□ 0.46
LINC01879-202ENST00000616078 POLR3GLQ9BT43 218 aa17.91■□□□□ 0.46
LINC01879-202ENST00000616078 CHD4Q14839 1912 aa17.91■□□□□ 0.46
LINC01879-202ENST00000616078 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
LINC01879-202ENST00000616078 COL23A1Q86Y22 540 aaPredicted RBP17.9■□□□□ 0.46
LINC01879-202ENST00000616078 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
LINC01879-202ENST00000616078 TAF1LQ8IZX4 1826 aa17.9■□□□□ 0.46
LINC01879-202ENST00000616078 HSPA5P11021 654 aaKnown RBP17.89■□□□□ 0.45
LINC01879-202ENST00000616078 MSH5O43196 834 aa17.88■□□□□ 0.45
LINC01879-202ENST00000616078 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
LINC01879-202ENST00000616078 PIGBQ92521 554 aa17.88■□□□□ 0.45
LINC01879-202ENST00000616078 EIF4A2Q14240 407 aaKnown RBP17.87■□□□□ 0.45
LINC01879-202ENST00000616078 GPR162Q16538 588 aa17.87■□□□□ 0.45
LINC01879-202ENST00000616078 IFNL2Q8IZJ0 200 aa17.87■□□□□ 0.45
LINC01879-202ENST00000616078 ZNF784Q8NCA9 323 aaPredicted RBP17.86■□□□□ 0.45
LINC01879-202ENST00000616078 PANK3Q9H999 370 aa17.86■□□□□ 0.45
LINC01879-202ENST00000616078 C4BP0C0L5 1744 aa17.85■□□□□ 0.45
LINC01879-202ENST00000616078 PHKG2P15735 406 aa17.85■□□□□ 0.45
LINC01879-202ENST00000616078 TNNT2P45379 298 aaPredicted RBP17.85■□□□□ 0.45
LINC01879-202ENST00000616078 IGSF1Q8N6C5 1336 aa17.84■□□□□ 0.45
LINC01879-202ENST00000616078 AK7Q96M32 723 aa17.84■□□□□ 0.45
LINC01879-202ENST00000616078 TMOD3Q9NYL9 352 aa17.84■□□□□ 0.45
LINC01879-202ENST00000616078 NLGN2Q8NFZ4 835 aa17.83■□□□□ 0.45
LINC01879-202ENST00000616078 LOC102724428A0A0B4J2F2 783 aa17.82■□□□□ 0.44
LINC01879-202ENST00000616078 SIK1P57059 783 aa17.82■□□□□ 0.44
LINC01879-202ENST00000616078 UBR3Q6ZT12 1888 aa17.82■□□□□ 0.44
LINC01879-202ENST00000616078 MSL1Q68DK7 614 aa17.82■□□□□ 0.44
LINC01879-202ENST00000616078 GOLGB1Q14789 3259 aaKnown RBP17.81■□□□□ 0.44
LINC01879-202ENST00000616078 SSFA2P28290 1259 aa17.8■□□□□ 0.44
LINC01879-202ENST00000616078 ASAP1Q9ULH1 1129 aa17.8■□□□□ 0.44
LINC01879-202ENST00000616078 CD2APQ9Y5K6 639 aa17.8■□□□□ 0.44
LINC01879-202ENST00000616078 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
LINC01879-202ENST00000616078 MORC1Q86VD1 984 aa17.79■□□□□ 0.44
LINC01879-202ENST00000616078 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
LINC01879-202ENST00000616078 LINC00116Q8NCU8 138 aa17.79■□□□□ 0.44
LINC01879-202ENST00000616078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.78■□□□□ 0.44
LINC01879-202ENST00000616078 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
LINC01879-202ENST00000616078 GRIN3BO60391 1043 aa17.78■□□□□ 0.44
LINC01879-202ENST00000616078 PLEKHO1Q53GL0 409 aaPredicted RBP17.78■□□□□ 0.44
LINC01879-202ENST00000616078 AMIGO3Q86WK7 504 aa17.78■□□□□ 0.44
LINC01879-202ENST00000616078 ATG3Q9NT62 314 aa17.78■□□□□ 0.44
LINC01879-202ENST00000616078 ATP6V1AP38606 617 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms