RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 SRGAP3O43295 1099 aa22.17■■□□□ 1.14
SPAST-203ENST00000615843 RAPGEF4Q8WZA2 1011 aa22.17■■□□□ 1.14
SPAST-203ENST00000615843 ZSCAN23Q3MJ62 389 aa22.17■■□□□ 1.14
SPAST-203ENST00000615843 ODF2Q5BJF6 829 aa22.17■■□□□ 1.14
SPAST-203ENST00000615843 ANO10Q9NW15 660 aa22.17■■□□□ 1.14
SPAST-203ENST00000615843 EXOC6BQ9Y2D4 811 aa22.17■■□□□ 1.14
SPAST-203ENST00000615843 PSME1Q06323 249 aa22.16■■□□□ 1.14
SPAST-203ENST00000615843 RBM27Q9P2N5 1060 aaKnown RBP22.16■■□□□ 1.14
SPAST-203ENST00000615843 POLR3GO15318 223 aaPredicted RBP22.16■■□□□ 1.14
SPAST-203ENST00000615843 LUC7LQ9NQ29 371 aaKnown RBP22.16■■□□□ 1.14
SPAST-203ENST00000615843 POLA1P09884 1462 aaPredicted RBP22.16■■□□□ 1.14
SPAST-203ENST00000615843 TRIM34Q9BYJ4 488 aa22.16■■□□□ 1.14
SPAST-203ENST00000615843 CENPHQ9H3R5 247 aa22.16■■□□□ 1.14
SPAST-203ENST00000615843 EPB41L2O43491 1005 aaKnown RBP22.16■■□□□ 1.14
SPAST-203ENST00000615843 AACSQ86V21 672 aa22.16■■□□□ 1.14
SPAST-203ENST00000615843 FCHSD2O94868 740 aa22.15■■□□□ 1.14
SPAST-203ENST00000615843 MX1P20591 662 aa22.15■■□□□ 1.14
SPAST-203ENST00000615843 SIL1Q9H173 461 aa22.15■■□□□ 1.14
SPAST-203ENST00000615843 DAPK1P53355 1430 aa22.15■■□□□ 1.14
SPAST-203ENST00000615843 TRIM22Q8IYM9 498 aa22.15■■□□□ 1.14
SPAST-203ENST00000615843 ANKRD30BQ9BXX2 1392 aa22.15■■□□□ 1.14
SPAST-203ENST00000615843 SMARCA5O60264 1052 aaPredicted RBP22.15■■□□□ 1.14
SPAST-203ENST00000615843 NEMFO60524 1076 aa22.14■■□□□ 1.14
SPAST-203ENST00000615843 NLRP6P59044 892 aa22.14■■□□□ 1.14
SPAST-203ENST00000615843 STIM1Q13586 685 aa22.14■■□□□ 1.14
SPAST-203ENST00000615843 UVSSAQ2YD98 709 aa22.14■■□□□ 1.14
SPAST-203ENST00000615843 DDX11Q96FC9 970 aa22.14■■□□□ 1.14
SPAST-203ENST00000615843 CRACR2AQ9BSW2 395 aa22.14■■□□□ 1.14
SPAST-203ENST00000615843 GTF2F1P35269 517 aaKnown RBP eCLIP22.14■■□□□ 1.14
SPAST-203ENST00000615843 LRRFIP2Q9Y608 721 aaKnown RBP22.14■■□□□ 1.14
SPAST-203ENST00000615843 ALDH1L2Q3SY69 923 aa22.14■■□□□ 1.13
SPAST-203ENST00000615843 TXLNBQ8N3L3 684 aa22.14■■□□□ 1.13
SPAST-203ENST00000615843 GDPD2Q9HCC8 539 aa22.14■■□□□ 1.13
SPAST-203ENST00000615843 STK11IPQ8N1F8 1099 aa22.13■■□□□ 1.13
SPAST-203ENST00000615843 CCDC43Q96MW1 224 aaKnown RBP22.13■■□□□ 1.13
SPAST-203ENST00000615843 TRMT1Q9NXH9 659 aaKnown RBP22.13■■□□□ 1.13
SPAST-203ENST00000615843 BMP2KLQ5H9B9 411 aa22.13■■□□□ 1.13
SPAST-203ENST00000615843 PRAM1Q96QH2 718 aa22.13■■□□□ 1.13
SPAST-203ENST00000615843 TBC1D9Q6ZT07 1266 aa22.13■■□□□ 1.13
SPAST-203ENST00000615843 NUTM1Q86Y26 1132 aa22.13■■□□□ 1.13
SPAST-203ENST00000615843 NFE2L2Q16236 605 aa22.12■■□□□ 1.13
SPAST-203ENST00000615843 ZFYVE27Q5T4F4 411 aa22.12■■□□□ 1.13
SPAST-203ENST00000615843 CKAP2LQ8IYA6 745 aa22.12■■□□□ 1.13
SPAST-203ENST00000615843 NUTM2GQ5VZR2 741 aa22.12■■□□□ 1.13
SPAST-203ENST00000615843 LRSAM1Q6UWE0 723 aa22.12■■□□□ 1.13
SPAST-203ENST00000615843 CDK5RAP3Q96JB5 506 aa22.12■■□□□ 1.13
SPAST-203ENST00000615843 SH2B1Q9NRF2 756 aaPredicted RBP22.12■■□□□ 1.13
SPAST-203ENST00000615843 SHTN1A0MZ66 631 aa22.11■■□□□ 1.13
SPAST-203ENST00000615843 NSD3Q9BZ95 1437 aa22.11■■□□□ 1.13
SPAST-203ENST00000615843 DHX29Q7Z478 1369 aaKnown RBP22.11■■□□□ 1.13
SPAST-203ENST00000615843 CASQ1P31415 396 aa22.11■■□□□ 1.13
SPAST-203ENST00000615843 CCDC158Q5M9N0 1113 aa22.11■■□□□ 1.13
SPAST-203ENST00000615843 MTMR7Q9Y216 660 aa22.11■■□□□ 1.13
SPAST-203ENST00000615843 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
SPAST-203ENST00000615843 CCDC148Q8NFR7 591 aa22.11■■□□□ 1.13
SPAST-203ENST00000615843 EVA1CP58658 441 aa22.1■■□□□ 1.13
SPAST-203ENST00000615843 GIMAP7Q8NHV1 300 aa22.1■■□□□ 1.13
SPAST-203ENST00000615843 CDKL5O76039 1030 aa22.1■■□□□ 1.13
SPAST-203ENST00000615843 TTC39AQ5SRH9 613 aa22.1■■□□□ 1.13
SPAST-203ENST00000615843 PRPF40BQ6NWY9 871 aaKnown RBP22.1■■□□□ 1.13
SPAST-203ENST00000615843 CABP1Q9NZU7 370 aa22.1■■□□□ 1.13
SPAST-203ENST00000615843 C8orf34Q49A92 452 aa22.09■■□□□ 1.13
SPAST-203ENST00000615843 JAKMIP3Q5VZ66 844 aa22.09■■□□□ 1.13
SPAST-203ENST00000615843 CCAR1Q8IX12 1150 aaKnown RBP22.09■■□□□ 1.13
SPAST-203ENST00000615843 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
SPAST-203ENST00000615843 TRIM27P14373 513 aa22.09■■□□□ 1.13
SPAST-203ENST00000615843 DDX19AQ9NUU7 478 aaKnown RBP22.09■■□□□ 1.13
SPAST-203ENST00000615843 LIMCH1Q9UPQ0 1083 aa22.09■■□□□ 1.13
SPAST-203ENST00000615843 GPRASP1Q5JY77 1395 aa22.08■■□□□ 1.13
SPAST-203ENST00000615843 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.08■■□□□ 1.13
SPAST-203ENST00000615843 BMS1Q14692 1282 aaKnown RBP22.08■■□□□ 1.13
SPAST-203ENST00000615843 ZKSCAN5Q9Y2L8 839 aa22.08■■□□□ 1.12
SPAST-203ENST00000615843 CTAGE5O15320 804 aa22.07■■□□□ 1.12
SPAST-203ENST00000615843 KIF5CO60282 957 aa22.07■■□□□ 1.12
SPAST-203ENST00000615843 KIAA1328Q86T90 577 aa22.07■■□□□ 1.12
SPAST-203ENST00000615843 NOLC1Q14978 699 aaKnown RBP eCLIP22.07■■□□□ 1.12
SPAST-203ENST00000615843 PAXBP1Q9Y5B6 917 aa22.07■■□□□ 1.12
SPAST-203ENST00000615843 TOP1P11387 765 aaKnown RBP22.07■■□□□ 1.12
SPAST-203ENST00000615843 GSDMDP57764 484 aa22.07■■□□□ 1.12
SPAST-203ENST00000615843 TIGD1Q96MW7 591 aa22.07■■□□□ 1.12
SPAST-203ENST00000615843 CCDC69A6NI79 296 aa22.07■■□□□ 1.12
SPAST-203ENST00000615843 KIF4BQ2VIQ3 1234 aa22.07■■□□□ 1.12
SPAST-203ENST00000615843 MAP9Q49MG5 647 aa22.07■■□□□ 1.12
SPAST-203ENST00000615843 PLEKHO1Q53GL0 409 aaPredicted RBP22.06■■□□□ 1.12
SPAST-203ENST00000615843 DHX37Q8IY37 1157 aaKnown RBP22.06■■□□□ 1.12
SPAST-203ENST00000615843 ABCC11Q96J66 1382 aa22.06■■□□□ 1.12
SPAST-203ENST00000615843 AFAP1Q8N556 730 aa22.06■■□□□ 1.12
SPAST-203ENST00000615843 CDK19Q9BWU1 502 aa22.06■■□□□ 1.12
SPAST-203ENST00000615843 GLRX3O76003 335 aaKnown RBP22.06■■□□□ 1.12
SPAST-203ENST00000615843 HCLS1P14317 486 aaPredicted RBP22.05■■□□□ 1.12
SPAST-203ENST00000615843 KRT222Q8N1A0 295 aa22.05■■□□□ 1.12
SPAST-203ENST00000615843 NLRP2Q9NX02 1062 aa22.05■■□□□ 1.12
SPAST-203ENST00000615843 MAP3K1Q13233 1512 aa22.05■■□□□ 1.12
SPAST-203ENST00000615843 KIF1BPQ96EK5 621 aa22.05■■□□□ 1.12
SPAST-203ENST00000615843 NOL7Q9UMY1 257 aaKnown RBP22.05■■□□□ 1.12
SPAST-203ENST00000615843 CEP135Q66GS9 1140 aa22.05■■□□□ 1.12
SPAST-203ENST00000615843 THUMPD2Q9BTF0 503 aaKnown RBP22.05■■□□□ 1.12
SPAST-203ENST00000615843 CTNNA3Q9UI47 895 aa22.05■■□□□ 1.12
SPAST-203ENST00000615843 TAX1BP1Q86VP1 789 aa22.05■■□□□ 1.12
SPAST-203ENST00000615843 TANGO6Q9C0B7 1094 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms