RNA–Protein interactions for RNA: ENST00000615838.1

SDCBP2-206, Transcript of syndecan binding protein 2, humanhuman

TSL 2

Gene SDCBP2, Length 1,096 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-206ENST00000615838 CGNL1Q0VF96 1302 aa23.23■■□□□ 1.31
SDCBP2-206ENST00000615838 TXNRD1Q16881 649 aa23.22■■□□□ 1.31
SDCBP2-206ENST00000615838 KIF24Q5T7B8 1368 aa23.22■■□□□ 1.31
SDCBP2-206ENST00000615838 CASZ1Q86V15 1759 aa23.21■■□□□ 1.31
SDCBP2-206ENST00000615838 PPM1GO15355 546 aaPredicted RBP23.19■■□□□ 1.3
SDCBP2-206ENST00000615838 ZCRB1Q8TBF4 217 aaKnown RBP23.19■■□□□ 1.3
SDCBP2-206ENST00000615838 PANK3Q9H999 370 aa23.17■■□□□ 1.3
SDCBP2-206ENST00000615838 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
SDCBP2-206ENST00000615838 PAPPAQ13219 1627 aa23.15■■□□□ 1.3
SDCBP2-206ENST00000615838 TNNT2P45379 298 aaPredicted RBP23.14■■□□□ 1.29
SDCBP2-206ENST00000615838 PDGFDQ9GZP0 370 aaPredicted RBP23.14■■□□□ 1.29
SDCBP2-206ENST00000615838 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
SDCBP2-206ENST00000615838 SYTL4Q96C24 671 aaPredicted RBP23.13■■□□□ 1.29
SDCBP2-206ENST00000615838 STK32BQ9NY57 414 aa23.13■■□□□ 1.29
SDCBP2-206ENST00000615838 PKD1L3Q7Z443 1732 aa23.13■■□□□ 1.29
SDCBP2-206ENST00000615838 LY75O60449 1722 aa23.12■■□□□ 1.29
SDCBP2-206ENST00000615838 PRIM1P49642 420 aaKnown RBP23.12■■□□□ 1.29
SDCBP2-206ENST00000615838 SPON1Q9HCB6 807 aa23.12■■□□□ 1.29
SDCBP2-206ENST00000615838 POLKQ9UBT6 870 aa23.12■■□□□ 1.29
SDCBP2-206ENST00000615838 WASHC2AQ641Q2 1341 aa23.11■■□□□ 1.29
SDCBP2-206ENST00000615838 ITGB4P16144 1822 aa23.11■■□□□ 1.29
SDCBP2-206ENST00000615838 SLC15A2Q16348 729 aa23.1■■□□□ 1.29
SDCBP2-206ENST00000615838 NSD2O96028 1365 aa23.1■■□□□ 1.29
SDCBP2-206ENST00000615838 NCAPD2Q15021 1401 aa23.09■■□□□ 1.29
SDCBP2-206ENST00000615838 TUBGCP6Q96RT7 1819 aa23.09■■□□□ 1.29
SDCBP2-206ENST00000615838 LRRC4BQ9NT99 713 aa23.08■■□□□ 1.29
SDCBP2-206ENST00000615838 TOGARAM1Q9Y4F4 1720 aa23.08■■□□□ 1.28
SDCBP2-206ENST00000615838 PCDH11XQ9BZA7 1347 aa23.08■■□□□ 1.28
SDCBP2-206ENST00000615838 PCDH11YQ9BZA8 1340 aa23.08■■□□□ 1.28
SDCBP2-206ENST00000615838 ZBTB7AO95365 584 aa23.06■■□□□ 1.28
SDCBP2-206ENST00000615838 EYA1Q99502 592 aa23.06■■□□□ 1.28
SDCBP2-206ENST00000615838 PPP1R1BQ9UD71 204 aaPredicted RBP23.05■■□□□ 1.28
SDCBP2-206ENST00000615838 KIF7Q2M1P5 1343 aa23.05■■□□□ 1.28
SDCBP2-206ENST00000615838 QSER1Q2KHR3 1735 aa23.05■■□□□ 1.28
SDCBP2-206ENST00000615838 CYP27B1O15528 508 aa23.04■■□□□ 1.28
SDCBP2-206ENST00000615838 KCNQ4P56696 695 aa23.04■■□□□ 1.28
SDCBP2-206ENST00000615838 ZNF827Q17R98 1081 aa23.04■■□□□ 1.28
SDCBP2-206ENST00000615838 EIF4A2Q14240 407 aaKnown RBP23.03■■□□□ 1.28
SDCBP2-206ENST00000615838 SLC27A3Q5K4L6 730 aa23.03■■□□□ 1.28
SDCBP2-206ENST00000615838 ATF5Q9Y2D1 282 aaPredicted RBP23.02■■□□□ 1.28
SDCBP2-206ENST00000615838 KNSTRNQ9Y448 316 aa23.02■■□□□ 1.28
SDCBP2-206ENST00000615838 MORC1Q86VD1 984 aa23.01■■□□□ 1.27
SDCBP2-206ENST00000615838 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
SDCBP2-206ENST00000615838 AKT1S1Q96B36 256 aa22.99■■□□□ 1.27
SDCBP2-206ENST00000615838 C5P01031 1676 aa22.98■■□□□ 1.27
SDCBP2-206ENST00000615838 PTGER2P43116 358 aa22.98■■□□□ 1.27
SDCBP2-206ENST00000615838 SPG7Q9UQ90 795 aa22.98■■□□□ 1.27
SDCBP2-206ENST00000615838 MPRIPQ6WCQ1 1025 aa22.97■■□□□ 1.27
SDCBP2-206ENST00000615838 CCNL1Q9UK58 526 aaPredicted RBP22.97■■□□□ 1.27
SDCBP2-206ENST00000615838 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
SDCBP2-206ENST00000615838 MTFR1LQ9H019 292 aa22.96■■□□□ 1.27
SDCBP2-206ENST00000615838 IGSF1Q8N6C5 1336 aa22.95■■□□□ 1.26
SDCBP2-206ENST00000615838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.94■■□□□ 1.26
SDCBP2-206ENST00000615838 NKX1-1Q15270 411 aaPredicted RBP22.93■■□□□ 1.26
SDCBP2-206ENST00000615838 TFCP2L1Q9NZI6 479 aa22.93■■□□□ 1.26
SDCBP2-206ENST00000615838 PALLDQ8WX93 1383 aa22.92■■□□□ 1.26
SDCBP2-206ENST00000615838 PNPLA7Q6ZV29 1317 aa22.92■■□□□ 1.26
SDCBP2-206ENST00000615838 COL24A1Q17RW2 1714 aa22.91■■□□□ 1.26
SDCBP2-206ENST00000615838 SGIP1Q9BQI5 828 aa22.91■■□□□ 1.26
SDCBP2-206ENST00000615838 PHKG2P15735 406 aa22.9■■□□□ 1.26
SDCBP2-206ENST00000615838 IFNL2Q8IZJ0 200 aa22.9■■□□□ 1.26
SDCBP2-206ENST00000615838 PIGBQ92521 554 aa22.9■■□□□ 1.26
SDCBP2-206ENST00000615838 PER1O15534 1290 aaPredicted RBP22.89■■□□□ 1.25
SDCBP2-206ENST00000615838 AEBP1Q8IUX7 1158 aa22.88■■□□□ 1.25
SDCBP2-206ENST00000615838 CC2D1BQ5T0F9 858 aaKnown RBP22.87■■□□□ 1.25
SDCBP2-206ENST00000615838 SMARCC1Q92922 1105 aaPredicted RBP22.87■■□□□ 1.25
SDCBP2-206ENST00000615838 C4BP0C0L5 1744 aa22.87■■□□□ 1.25
SDCBP2-206ENST00000615838 PLEKHG2Q9H7P9 1386 aa22.87■■□□□ 1.25
SDCBP2-206ENST00000615838 VIRMAQ69YN4 1812 aaKnown RBP22.87■■□□□ 1.25
SDCBP2-206ENST00000615838 UBR3Q6ZT12 1888 aa22.86■■□□□ 1.25
SDCBP2-206ENST00000615838 FHDC1Q9C0D6 1143 aaPredicted RBP22.86■■□□□ 1.25
SDCBP2-206ENST00000615838 TMOD3Q9NYL9 352 aa22.86■■□□□ 1.25
SDCBP2-206ENST00000615838 SLC16A10Q8TF71 515 aa22.85■■□□□ 1.25
SDCBP2-206ENST00000615838 IL13P35225 146 aa22.84■■□□□ 1.25
SDCBP2-206ENST00000615838 MTHFSP49914 203 aa22.84■■□□□ 1.25
SDCBP2-206ENST00000615838 PLEKHO1Q53GL0 409 aaPredicted RBP22.84■■□□□ 1.25
SDCBP2-206ENST00000615838 ARXQ96QS3 562 aa22.84■■□□□ 1.25
SDCBP2-206ENST00000615838 SULT6B1Q6IMI4 303 aa22.83■■□□□ 1.25
SDCBP2-206ENST00000615838 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.25
SDCBP2-206ENST00000615838 ASAP1Q9ULH1 1129 aa22.83■■□□□ 1.25
SDCBP2-206ENST00000615838 MSH5O43196 834 aa22.82■■□□□ 1.24
SDCBP2-206ENST00000615838 CNGB1Q14028 1251 aaPredicted RBP22.82■■□□□ 1.24
SDCBP2-206ENST00000615838 COL23A1Q86Y22 540 aaPredicted RBP22.82■■□□□ 1.24
SDCBP2-206ENST00000615838 SYT17Q9BSW7 474 aa22.82■■□□□ 1.24
SDCBP2-206ENST00000615838 UTRNP46939 3433 aa22.82■■□□□ 1.24
SDCBP2-206ENST00000615838 SCN11AQ9UI33 1791 aa22.81■■□□□ 1.24
SDCBP2-206ENST00000615838 KDRP35968 1356 aa22.8■■□□□ 1.24
SDCBP2-206ENST00000615838 LOC102724428A0A0B4J2F2 783 aa22.8■■□□□ 1.24
SDCBP2-206ENST00000615838 DCAF8L1A6NGE4 600 aa22.8■■□□□ 1.24
SDCBP2-206ENST00000615838 SIK1P57059 783 aa22.8■■□□□ 1.24
SDCBP2-206ENST00000615838 AMOTQ4VCS5 1084 aa22.8■■□□□ 1.24
SDCBP2-206ENST00000615838 KDM6AO15550 1401 aaPredicted RBP22.8■■□□□ 1.24
SDCBP2-206ENST00000615838 POLD1P28340 1107 aa22.79■■□□□ 1.24
SDCBP2-206ENST00000615838 DCAF5Q96JK2 942 aa22.79■■□□□ 1.24
SDCBP2-206ENST00000615838 HSP90AB1P08238 724 aaKnown RBP22.78■■□□□ 1.24
SDCBP2-206ENST00000615838 ATG3Q9NT62 314 aa22.78■■□□□ 1.24
SDCBP2-206ENST00000615838 NPC1L1Q9UHC9 1359 aa22.77■■□□□ 1.24
SDCBP2-206ENST00000615838 ERVV-2B6SEH9 535 aa22.77■■□□□ 1.24
SDCBP2-206ENST00000615838 LINC00116Q8NCU8 138 aa22.77■■□□□ 1.24
SDCBP2-206ENST00000615838 AK7Q96M32 723 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms