RNA–Protein interactions for RNA: ENST00000615497.4

TBC1D1-219, Transcript of TBC1 domain family member 1, humanhuman

TSL 2 BASIC

Gene TBC1D1, Length 2,383 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-219ENST00000615497 USHBP1Q8N6Y0 703 aa19.76■□□□□ 0.75
TBC1D1-219ENST00000615497 KCNH5Q8NCM2 988 aa19.76■□□□□ 0.75
TBC1D1-219ENST00000615497 MIS18AQ9NYP9 233 aa19.76■□□□□ 0.75
TBC1D1-219ENST00000615497 MST1RQ04912 1400 aa19.76■□□□□ 0.75
TBC1D1-219ENST00000615497 KRT28Q7Z3Y7 464 aa19.76■□□□□ 0.75
TBC1D1-219ENST00000615497 GAS2L2Q8NHY3 880 aa19.76■□□□□ 0.75
TBC1D1-219ENST00000615497 SLIT3O75094 1523 aa19.75■□□□□ 0.75
TBC1D1-219ENST00000615497 PHRF1Q9P1Y6 1649 aaKnown RBP19.75■□□□□ 0.75
TBC1D1-219ENST00000615497 NBPF6Q5VWK0 638 aa19.75■□□□□ 0.75
TBC1D1-219ENST00000615497 NBPF4Q96M43 638 aa19.75■□□□□ 0.75
TBC1D1-219ENST00000615497 ARHGEF25Q86VW2 580 aa19.75■□□□□ 0.75
TBC1D1-219ENST00000615497 KIAA0232Q92628 1395 aa19.74■□□□□ 0.75
TBC1D1-219ENST00000615497 USP19O94966 1318 aa19.74■□□□□ 0.75
TBC1D1-219ENST00000615497 MSH6P52701 1360 aa19.74■□□□□ 0.75
TBC1D1-219ENST00000615497 KDM4FA0A1W2PPD8 638 aa19.73■□□□□ 0.75
TBC1D1-219ENST00000615497 C8orf34Q49A92 452 aa19.73■□□□□ 0.75
TBC1D1-219ENST00000615497 RWDD1Q9H446 243 aaPredicted RBP19.73■□□□□ 0.75
TBC1D1-219ENST00000615497 KIF1AQ12756 1690 aa19.73■□□□□ 0.75
TBC1D1-219ENST00000615497 RTF1Q92541 710 aaKnown RBP19.72■□□□□ 0.75
TBC1D1-219ENST00000615497 ABCC4O15439 1325 aa19.72■□□□□ 0.75
TBC1D1-219ENST00000615497 HTATSF1O43719 755 aaKnown RBP19.71■□□□□ 0.75
TBC1D1-219ENST00000615497 PLEKHG5O94827 1062 aa19.71■□□□□ 0.75
TBC1D1-219ENST00000615497 IL17REQ8NFR9 667 aa19.71■□□□□ 0.75
TBC1D1-219ENST00000615497 DDX17Q92841 729 aaKnown RBP19.71■□□□□ 0.75
TBC1D1-219ENST00000615497 LRRC37A3O60309 1634 aa19.71■□□□□ 0.75
TBC1D1-219ENST00000615497 NCOA3Q9Y6Q9 1424 aa19.71■□□□□ 0.75
TBC1D1-219ENST00000615497 ZBTB7BO15156 539 aaPredicted RBP19.71■□□□□ 0.75
TBC1D1-219ENST00000615497 HDAC1Q13547 482 aaPredicted RBP19.71■□□□□ 0.75
TBC1D1-219ENST00000615497 LMOD2Q6P5Q4 547 aa19.71■□□□□ 0.75
TBC1D1-219ENST00000615497 DCCP43146 1447 aa19.7■□□□□ 0.74
TBC1D1-219ENST00000615497 ZBTB7CA1YPR0 619 aa19.7■□□□□ 0.74
TBC1D1-219ENST00000615497 GNAT3A8MTJ3 354 aa19.7■□□□□ 0.74
TBC1D1-219ENST00000615497 ATF3P18847 181 aa19.7■□□□□ 0.74
TBC1D1-219ENST00000615497 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
TBC1D1-219ENST00000615497 RGPD2P0DJD1 1756 aa19.7■□□□□ 0.74
TBC1D1-219ENST00000615497 LRRC59Q96AG4 307 aaKnown RBP19.7■□□□□ 0.74
TBC1D1-219ENST00000615497 FAM161AQ3B820 660 aa19.69■□□□□ 0.74
TBC1D1-219ENST00000615497 TSPYL4Q9UJ04 414 aa19.69■□□□□ 0.74
TBC1D1-219ENST00000615497 AXIN2Q9Y2T1 843 aa19.69■□□□□ 0.74
TBC1D1-219ENST00000615497 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
TBC1D1-219ENST00000615497 MAP3K5Q99683 1374 aa19.68■□□□□ 0.74
TBC1D1-219ENST00000615497 LMTK3Q96Q04 1460 aa19.68■□□□□ 0.74
TBC1D1-219ENST00000615497 RGS12O14924 1447 aa19.68■□□□□ 0.74
TBC1D1-219ENST00000615497 MED1Q15648 1581 aaPredicted RBP19.67■□□□□ 0.74
TBC1D1-219ENST00000615497 NCAPD2Q15021 1401 aa19.66■□□□□ 0.74
TBC1D1-219ENST00000615497 ANP32AP39687 249 aaKnown RBP19.66■□□□□ 0.74
TBC1D1-219ENST00000615497 STRCQ7RTU9 1775 aa19.66■□□□□ 0.74
TBC1D1-219ENST00000615497 API5Q9BZZ5 524 aaKnown RBP19.65■□□□□ 0.74
TBC1D1-219ENST00000615497 SMC5Q8IY18 1101 aa19.65■□□□□ 0.74
TBC1D1-219ENST00000615497 XIRP1Q702N8 1843 aaKnown RBP19.65■□□□□ 0.74
TBC1D1-219ENST00000615497 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.74
TBC1D1-219ENST00000615497 CADPS2Q86UW7 1296 aa19.64■□□□□ 0.74
TBC1D1-219ENST00000615497 IPO9Q96P70 1041 aaKnown RBP19.64■□□□□ 0.74
TBC1D1-219ENST00000615497 HAP1P54257 671 aaPredicted RBP19.63■□□□□ 0.73
TBC1D1-219ENST00000615497 CEMIPQ8WUJ3 1361 aa19.63■□□□□ 0.73
TBC1D1-219ENST00000615497 ANKRD24Q8TF21 1146 aa19.63■□□□□ 0.73
TBC1D1-219ENST00000615497 C1orf115Q9H7X2 142 aa19.62■□□□□ 0.73
TBC1D1-219ENST00000615497 SLC4A2P04920 1241 aa19.62■□□□□ 0.73
TBC1D1-219ENST00000615497 ZC3H6P61129 1189 aaKnown RBP19.62■□□□□ 0.73
TBC1D1-219ENST00000615497 TAF7Q15545 349 aaPredicted RBP19.61■□□□□ 0.73
TBC1D1-219ENST00000615497 INTS3Q68E01 1043 aaKnown RBP19.61■□□□□ 0.73
TBC1D1-219ENST00000615497 SIRT2Q8IXJ6 389 aa19.61■□□□□ 0.73
TBC1D1-219ENST00000615497 LGR6Q9HBX8 967 aa19.61■□□□□ 0.73
TBC1D1-219ENST00000615497 G2E3Q7L622 706 aa19.61■□□□□ 0.73
TBC1D1-219ENST00000615497 RGPD5Q99666 1765 aa19.6■□□□□ 0.73
TBC1D1-219ENST00000615497 PXDNQ92626 1479 aa19.59■□□□□ 0.73
TBC1D1-219ENST00000615497 CAMTA1Q9Y6Y1 1673 aa19.59■□□□□ 0.73
TBC1D1-219ENST00000615497 BABAM1Q9NWV8 329 aa19.58■□□□□ 0.73
TBC1D1-219ENST00000615497 PTPRCP08575 1304 aa19.58■□□□□ 0.73
TBC1D1-219ENST00000615497 NPHP3Q7Z494 1330 aa19.58■□□□□ 0.73
TBC1D1-219ENST00000615497 CABLES1Q8TDN4 633 aa19.58■□□□□ 0.72
TBC1D1-219ENST00000615497 ERBB3P21860 1342 aa19.58■□□□□ 0.72
TBC1D1-219ENST00000615497 ZNF335Q9H4Z2 1342 aaPredicted RBP19.57■□□□□ 0.72
TBC1D1-219ENST00000615497 CHMP4BQ9H444 224 aaKnown RBP19.57■□□□□ 0.72
TBC1D1-219ENST00000615497 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
TBC1D1-219ENST00000615497 LMO7Q8WWI1 1683 aa19.56■□□□□ 0.72
TBC1D1-219ENST00000615497 SEC24BO95487 1268 aa19.56■□□□□ 0.72
TBC1D1-219ENST00000615497 ZNF530Q6P9A1 599 aaPredicted RBP19.56■□□□□ 0.72
TBC1D1-219ENST00000615497 BRINP3Q76B58 766 aa19.56■□□□□ 0.72
TBC1D1-219ENST00000615497 NOP58Q9Y2X3 529 aaKnown RBP19.56■□□□□ 0.72
TBC1D1-219ENST00000615497 VIRMAQ69YN4 1812 aaKnown RBP19.56■□□□□ 0.72
TBC1D1-219ENST00000615497 SPATA31A3Q5VYP0 1347 aa19.55■□□□□ 0.72
TBC1D1-219ENST00000615497 NUCB1Q02818 461 aa19.55■□□□□ 0.72
TBC1D1-219ENST00000615497 PLEKHO1Q53GL0 409 aaPredicted RBP19.55■□□□□ 0.72
TBC1D1-219ENST00000615497 AKAP4Q5JQC9 854 aa19.55■□□□□ 0.72
TBC1D1-219ENST00000615497 COL18A1P39060 1754 aa19.55■□□□□ 0.72
TBC1D1-219ENST00000615497 AMOTQ4VCS5 1084 aa19.54■□□□□ 0.72
TBC1D1-219ENST00000615497 MPRIPQ6WCQ1 1025 aa19.54■□□□□ 0.72
TBC1D1-219ENST00000615497 F6X3S4 739 aa19.53■□□□□ 0.72
TBC1D1-219ENST00000615497 CRYBG1Q9Y4K1 1723 aa19.52■□□□□ 0.72
TBC1D1-219ENST00000615497 FAM208AQ9UK61 1670 aaKnown RBP19.52■□□□□ 0.72
TBC1D1-219ENST00000615497 KCNQ3O43525 872 aa19.52■□□□□ 0.72
TBC1D1-219ENST00000615497 NECTIN2Q92692 538 aa19.52■□□□□ 0.72
TBC1D1-219ENST00000615497 CCDC30Q5VVM6 783 aa19.51■□□□□ 0.71
TBC1D1-219ENST00000615497 SOS1Q07889 1333 aaPredicted RBP19.51■□□□□ 0.71
TBC1D1-219ENST00000615497 ATP10DQ9P241 1426 aa19.51■□□□□ 0.71
TBC1D1-219ENST00000615497 EIF4A1P60842 406 aaKnown RBP19.51■□□□□ 0.71
TBC1D1-219ENST00000615497 RNMTO43148 476 aaKnown RBP19.5■□□□□ 0.71
TBC1D1-219ENST00000615497 MEIS3Q99687 375 aa19.5■□□□□ 0.71
TBC1D1-219ENST00000615497 KDM3BQ7LBC6 1761 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms