RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
FOXN3-219ENST00000615335 FAM83GA6ND36 823 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 DUSP27Q5VZP5 1158 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 RRAGDQ9NQL2 400 aaPredicted RBP16.64■□□□□ 0.25
FOXN3-219ENST00000615335 ERBB3P21860 1342 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 JCADQ9P266 1359 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 RGPD1P0DJD0 1748 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 ADAMTS2O95450 1211 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 IGSF1Q8N6C5 1336 aa16.64■□□□□ 0.25
FOXN3-219ENST00000615335 L1TD1Q5T7N2 865 aaKnown RBP16.63■□□□□ 0.25
FOXN3-219ENST00000615335 NBPF6Q5VWK0 638 aa16.63■□□□□ 0.25
FOXN3-219ENST00000615335 TCP11L2Q8N4U5 519 aa16.63■□□□□ 0.25
FOXN3-219ENST00000615335 NBPF4Q96M43 638 aa16.63■□□□□ 0.25
FOXN3-219ENST00000615335 ZNF521Q96K83 1311 aa16.63■□□□□ 0.25
FOXN3-219ENST00000615335 RBM10P98175 930 aaKnown RBP16.62■□□□□ 0.25
FOXN3-219ENST00000615335 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
FOXN3-219ENST00000615335 USHBP1Q8N6Y0 703 aa16.62■□□□□ 0.25
FOXN3-219ENST00000615335 ABCC6O95255 1503 aa16.62■□□□□ 0.25
FOXN3-219ENST00000615335 FGD1P98174 961 aa16.62■□□□□ 0.25
FOXN3-219ENST00000615335 AAMPQ13685 434 aa16.62■□□□□ 0.25
FOXN3-219ENST00000615335 C20orf194Q5TEA3 1177 aa16.62■□□□□ 0.25
FOXN3-219ENST00000615335 RGPD2P0DJD1 1756 aa16.62■□□□□ 0.25
FOXN3-219ENST00000615335 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
FOXN3-219ENST00000615335 CAMTA1Q9Y6Y1 1673 aa16.6■□□□□ 0.25
FOXN3-219ENST00000615335 PHACTR3Q96KR7 559 aa16.6■□□□□ 0.25
FOXN3-219ENST00000615335 NLRP2Q9NX02 1062 aa16.6■□□□□ 0.25
FOXN3-219ENST00000615335 EVA1CP58658 441 aa16.6■□□□□ 0.25
FOXN3-219ENST00000615335 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
FOXN3-219ENST00000615335 KDRP35968 1356 aa16.6■□□□□ 0.25
FOXN3-219ENST00000615335 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
FOXN3-219ENST00000615335 STRN4Q9NRL3 753 aa16.59■□□□□ 0.25
FOXN3-219ENST00000615335 LMO7Q8WWI1 1683 aa16.59■□□□□ 0.25
FOXN3-219ENST00000615335 CLCN1P35523 988 aa16.59■□□□□ 0.25
FOXN3-219ENST00000615335 SLFN5Q08AF3 891 aa16.58■□□□□ 0.25
FOXN3-219ENST00000615335 COL14A1Q05707 1796 aaKnown RBP16.58■□□□□ 0.24
FOXN3-219ENST00000615335 TMPOP42166 694 aaKnown RBP16.57■□□□□ 0.24
FOXN3-219ENST00000615335 CALD1Q05682 793 aaKnown RBP16.57■□□□□ 0.24
FOXN3-219ENST00000615335 TOM1L2Q6ZVM7 507 aa16.57■□□□□ 0.24
FOXN3-219ENST00000615335 COL5A2P05997 1499 aaPredicted RBP16.57■□□□□ 0.24
FOXN3-219ENST00000615335 SPATA31A6Q5VVP1 1343 aa16.57■□□□□ 0.24
FOXN3-219ENST00000615335 KDM2BQ8NHM5 1336 aa16.57■□□□□ 0.24
FOXN3-219ENST00000615335 WDR17Q8IZU2 1322 aa16.56■□□□□ 0.24
FOXN3-219ENST00000615335 CENPQQ7L2Z9 268 aaPredicted RBP16.56■□□□□ 0.24
FOXN3-219ENST00000615335 RIPK4P57078 832 aa16.56■□□□□ 0.24
FOXN3-219ENST00000615335 SKAP1Q86WV1 359 aa16.56■□□□□ 0.24
FOXN3-219ENST00000615335 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
FOXN3-219ENST00000615335 FAM208AQ9UK61 1670 aaKnown RBP16.55■□□□□ 0.24
FOXN3-219ENST00000615335 TRMT2AQ8IZ69 625 aaKnown RBP16.55■□□□□ 0.24
FOXN3-219ENST00000615335 NFE2L2Q16236 605 aa16.54■□□□□ 0.24
FOXN3-219ENST00000615335 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
FOXN3-219ENST00000615335 A0A0U1RQG5 324 aaPredicted RBP16.54■□□□□ 0.24
FOXN3-219ENST00000615335 PDE4CQ08493 712 aa16.53■□□□□ 0.24
FOXN3-219ENST00000615335 WWC1Q8IX03 1113 aa16.53■□□□□ 0.24
FOXN3-219ENST00000615335 C8orf37Q96NL8 207 aa16.53■□□□□ 0.24
FOXN3-219ENST00000615335 NGLY1Q96IV0 654 aa16.53■□□□□ 0.24
FOXN3-219ENST00000615335 PDCL3Q9H2J4 239 aa16.53■□□□□ 0.24
FOXN3-219ENST00000615335 PLCH1Q4KWH8 1693 aa16.52■□□□□ 0.24
FOXN3-219ENST00000615335 MTHFSDQ2M296 383 aaKnown RBP16.52■□□□□ 0.24
FOXN3-219ENST00000615335 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
FOXN3-219ENST00000615335 NCAPD2Q15021 1401 aa16.52■□□□□ 0.23
FOXN3-219ENST00000615335 FRAT2O75474 233 aaPredicted RBP16.51■□□□□ 0.23
FOXN3-219ENST00000615335 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
FOXN3-219ENST00000615335 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
FOXN3-219ENST00000615335 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
FOXN3-219ENST00000615335 E9PSI1 815 aa16.5■□□□□ 0.23
FOXN3-219ENST00000615335 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
FOXN3-219ENST00000615335 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
FOXN3-219ENST00000615335 TRIM35Q9UPQ4 493 aa16.5■□□□□ 0.23
FOXN3-219ENST00000615335 LRP6O75581 1613 aa16.5■□□□□ 0.23
FOXN3-219ENST00000615335 DLG5Q8TDM6 1919 aa16.5■□□□□ 0.23
FOXN3-219ENST00000615335 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
FOXN3-219ENST00000615335 CRB1P82279 1406 aa16.5■□□□□ 0.23
FOXN3-219ENST00000615335 TATP17735 454 aaPredicted RBP16.49■□□□□ 0.23
FOXN3-219ENST00000615335 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
FOXN3-219ENST00000615335 PLEKHO1Q53GL0 409 aaPredicted RBP16.49■□□□□ 0.23
FOXN3-219ENST00000615335 TPM2P07951 284 aa16.48■□□□□ 0.23
FOXN3-219ENST00000615335 LMOD3Q0VAK6 560 aa16.48■□□□□ 0.23
FOXN3-219ENST00000615335 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
FOXN3-219ENST00000615335 FBXO41Q8TF61 875 aa16.47■□□□□ 0.23
FOXN3-219ENST00000615335 SLIT2O94813 1529 aa16.47■□□□□ 0.23
FOXN3-219ENST00000615335 NWD2Q9ULI1 1742 aa16.47■□□□□ 0.23
FOXN3-219ENST00000615335 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
FOXN3-219ENST00000615335 MEGF6O75095 1541 aa16.46■□□□□ 0.23
FOXN3-219ENST00000615335 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
FOXN3-219ENST00000615335 CCDC9Q9Y3X0 531 aaKnown RBP16.46■□□□□ 0.23
FOXN3-219ENST00000615335 DCTN1Q14203 1278 aa16.46■□□□□ 0.23
FOXN3-219ENST00000615335 UNC5CLQ8IV45 518 aa16.46■□□□□ 0.23
FOXN3-219ENST00000615335 PRDM4Q9UKN5 801 aa16.46■□□□□ 0.23
FOXN3-219ENST00000615335 GNAT3A8MTJ3 354 aa16.45■□□□□ 0.22
FOXN3-219ENST00000615335 BCAR3O75815 825 aa16.45■□□□□ 0.22
FOXN3-219ENST00000615335 IL2RBP14784 551 aa16.45■□□□□ 0.22
FOXN3-219ENST00000615335 FAM161AQ3B820 660 aa16.45■□□□□ 0.22
FOXN3-219ENST00000615335 ZNF530Q6P9A1 599 aaPredicted RBP16.45■□□□□ 0.22
FOXN3-219ENST00000615335 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
FOXN3-219ENST00000615335 NRAPQ86VF7 1730 aa16.45■□□□□ 0.22
FOXN3-219ENST00000615335 MCM10Q7L590 875 aa16.45■□□□□ 0.22
FOXN3-219ENST00000615335 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms