RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
MMP28-205ENST00000615317 A0A0G2JS52 829 aa12.1□□□□□ -0.47
MMP28-205ENST00000615317 MYT1Q01538 1121 aa12.1□□□□□ -0.47
MMP28-205ENST00000615317 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
MMP28-205ENST00000615317 TCP11L2Q8N4U5 519 aa12.1□□□□□ -0.47
MMP28-205ENST00000615317 RAPGEF4Q8WZA2 1011 aa12.1□□□□□ -0.47
MMP28-205ENST00000615317 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
MMP28-205ENST00000615317 IL2RBP14784 551 aa12.09□□□□□ -0.47
MMP28-205ENST00000615317 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
MMP28-205ENST00000615317 ITGB4P16144 1822 aa12.09□□□□□ -0.47
MMP28-205ENST00000615317 PLEKHG2Q9H7P9 1386 aa12.08□□□□□ -0.48
MMP28-205ENST00000615317 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
MMP28-205ENST00000615317 GJD4Q96KN9 370 aaPredicted RBP12.08□□□□□ -0.48
MMP28-205ENST00000615317 RGS17Q9UGC6 210 aaPredicted RBP12.08□□□□□ -0.48
MMP28-205ENST00000615317 SBF2Q86WG5 1849 aa12.08□□□□□ -0.48
MMP28-205ENST00000615317 NHSQ6T4R5 1651 aa12.07□□□□□ -0.48
MMP28-205ENST00000615317 FCHSD2O94868 740 aa12.07□□□□□ -0.48
MMP28-205ENST00000615317 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
MMP28-205ENST00000615317 QTRT2Q9H974 415 aaKnown RBP12.07□□□□□ -0.48
MMP28-205ENST00000615317 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
MMP28-205ENST00000615317 NEFMP07197 916 aa12.06□□□□□ -0.48
MMP28-205ENST00000615317 BARGINQ6ZT62 677 aa12.06□□□□□ -0.48
MMP28-205ENST00000615317 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
MMP28-205ENST00000615317 PHACTR3Q96KR7 559 aa12.06□□□□□ -0.48
MMP28-205ENST00000615317 RRP7AQ9Y3A4 280 aaKnown RBP12.06□□□□□ -0.48
MMP28-205ENST00000615317 PAPPAQ13219 1627 aa12.06□□□□□ -0.48
MMP28-205ENST00000615317 MRC1P22897 1456 aa12.06□□□□□ -0.48
MMP28-205ENST00000615317 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
MMP28-205ENST00000615317 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
MMP28-205ENST00000615317 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
MMP28-205ENST00000615317 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
MMP28-205ENST00000615317 ZNF530Q6P9A1 599 aaPredicted RBP12.05□□□□□ -0.48
MMP28-205ENST00000615317 POTEAQ6S8J7 498 aa12.05□□□□□ -0.48
MMP28-205ENST00000615317 YTHDC1Q96MU7 727 aaKnown RBP12.05□□□□□ -0.48
MMP28-205ENST00000615317 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
MMP28-205ENST00000615317 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
MMP28-205ENST00000615317 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
MMP28-205ENST00000615317 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
MMP28-205ENST00000615317 TNS1Q9HBL0 1735 aaKnown RBP12.03□□□□□ -0.48
MMP28-205ENST00000615317 BTAF1O14981 1849 aa12.03□□□□□ -0.48
MMP28-205ENST00000615317 APAF1O14727 1248 aa12.03□□□□□ -0.48
MMP28-205ENST00000615317 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
MMP28-205ENST00000615317 GAS2L2Q8NHY3 880 aa12.03□□□□□ -0.48
MMP28-205ENST00000615317 CDCA7Q9BWT1 371 aaPredicted RBP12.03□□□□□ -0.48
MMP28-205ENST00000615317 HNRNPUQ00839 825 aaKnown RBP eCLIP12.02□□□□□ -0.49
MMP28-205ENST00000615317 NEUROD2Q15784 382 aa12.02□□□□□ -0.49
MMP28-205ENST00000615317 NFE2L2Q16236 605 aa12.02□□□□□ -0.49
MMP28-205ENST00000615317 DDB1Q16531 1140 aa12.02□□□□□ -0.49
MMP28-205ENST00000615317 ZCRB1Q8TBF4 217 aaKnown RBP12.02□□□□□ -0.49
MMP28-205ENST00000615317 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
MMP28-205ENST00000615317 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.49
MMP28-205ENST00000615317 KAT6BQ8WYB5 2073 aa12.02□□□□□ -0.49
MMP28-205ENST00000615317 UBR2Q8IWV8 1755 aa12.01□□□□□ -0.49
MMP28-205ENST00000615317 CYP27B1O15528 508 aa12.01□□□□□ -0.49
MMP28-205ENST00000615317 RXRBP28702 533 aa12.01□□□□□ -0.49
MMP28-205ENST00000615317 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
MMP28-205ENST00000615317 AMOTQ4VCS5 1084 aa12.01□□□□□ -0.49
MMP28-205ENST00000615317 C1orf141Q5JVX7 400 aa12.01□□□□□ -0.49
MMP28-205ENST00000615317 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
MMP28-205ENST00000615317 PHKG2P15735 406 aa12□□□□□ -0.49
MMP28-205ENST00000615317 DDX54Q8TDD1 881 aaKnown RBP12□□□□□ -0.49
MMP28-205ENST00000615317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.49
MMP28-205ENST00000615317 C5P01031 1676 aa12□□□□□ -0.49
MMP28-205ENST00000615317 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
MMP28-205ENST00000615317 RIPK4P57078 832 aa11.99□□□□□ -0.49
MMP28-205ENST00000615317 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
MMP28-205ENST00000615317 THUMPD2Q9BTF0 503 aaKnown RBP11.99□□□□□ -0.49
MMP28-205ENST00000615317 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
MMP28-205ENST00000615317 EXOC5O00471 708 aa11.98□□□□□ -0.49
MMP28-205ENST00000615317 DCTN1Q14203 1278 aa11.98□□□□□ -0.49
MMP28-205ENST00000615317 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
MMP28-205ENST00000615317 MCM10Q7L590 875 aa11.98□□□□□ -0.49
MMP28-205ENST00000615317 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
MMP28-205ENST00000615317 LMOD3Q0VAK6 560 aa11.97□□□□□ -0.49
MMP28-205ENST00000615317 PDE3BQ13370 1112 aa11.97□□□□□ -0.49
MMP28-205ENST00000615317 FAM182BQ5T319 152 aa11.97□□□□□ -0.49
MMP28-205ENST00000615317 MARCH10Q8NA82 808 aaPredicted RBP11.97□□□□□ -0.49
MMP28-205ENST00000615317 CEMIPQ8WUJ3 1361 aa11.96□□□□□ -0.49
MMP28-205ENST00000615317 ZBED9Q6R2W3 1325 aa11.96□□□□□ -0.49
MMP28-205ENST00000615317 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
MMP28-205ENST00000615317 RTF1Q92541 710 aaKnown RBP11.96□□□□□ -0.49
MMP28-205ENST00000615317 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
MMP28-205ENST00000615317 LY75O60449 1722 aa11.96□□□□□ -0.49
MMP28-205ENST00000615317 TJP1Q07157 1748 aa11.96□□□□□ -0.49
MMP28-205ENST00000615317 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
MMP28-205ENST00000615317 RGPD4Q7Z3J3 1758 aa11.95□□□□□ -0.5
MMP28-205ENST00000615317 HSP90AB1P08238 724 aaKnown RBP11.95□□□□□ -0.5
MMP28-205ENST00000615317 KRT27Q7Z3Y8 459 aa11.95□□□□□ -0.5
MMP28-205ENST00000615317 ZNF521Q96K83 1311 aa11.94□□□□□ -0.5
MMP28-205ENST00000615317 RNMTO43148 476 aaKnown RBP11.94□□□□□ -0.5
MMP28-205ENST00000615317 ACSBG1Q96GR2 724 aa11.94□□□□□ -0.5
MMP28-205ENST00000615317 DCAF5Q96JK2 942 aa11.94□□□□□ -0.5
MMP28-205ENST00000615317 LGR6Q9HBX8 967 aa11.94□□□□□ -0.5
MMP28-205ENST00000615317 KCPQ6ZWJ8 1503 aa11.94□□□□□ -0.5
MMP28-205ENST00000615317 BCL9O00512 1426 aa11.94□□□□□ -0.5
MMP28-205ENST00000615317 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
MMP28-205ENST00000615317 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
MMP28-205ENST00000615317 CCDC27Q2M243 656 aa11.93□□□□□ -0.5
MMP28-205ENST00000615317 WWC1Q8IX03 1113 aa11.93□□□□□ -0.5
MMP28-205ENST00000615317 IL17REQ8NFR9 667 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms