RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 APBA3O96018 575 aa10.75□□□□□ -0.69
PCDH9-205ENST00000614931 EZH2Q15910 746 aaKnown RBP10.75□□□□□ -0.69
PCDH9-205ENST00000614931 IP6K1Q92551 441 aa10.75□□□□□ -0.69
PCDH9-205ENST00000614931 ADAMTS8Q9UP79 889 aa10.75□□□□□ -0.69
PCDH9-205ENST00000614931 BCL9O00512 1426 aa10.75□□□□□ -0.69
PCDH9-205ENST00000614931 SBF2Q86WG5 1849 aa10.74□□□□□ -0.69
PCDH9-205ENST00000614931 MARCH10Q8NA82 808 aaPredicted RBP10.74□□□□□ -0.69
PCDH9-205ENST00000614931 ANKRD24Q8TF21 1146 aa10.74□□□□□ -0.69
PCDH9-205ENST00000614931 YTHDC1Q96MU7 727 aaKnown RBP10.74□□□□□ -0.69
PCDH9-205ENST00000614931 SENP3-EIF4A1A0A087X0R7 540 aa10.73□□□□□ -0.69
PCDH9-205ENST00000614931 WDR43Q15061 677 aaKnown RBP eCLIP10.73□□□□□ -0.69
PCDH9-205ENST00000614931 NLRP2Q9NX02 1062 aa10.73□□□□□ -0.69
PCDH9-205ENST00000614931 NCAPD2Q15021 1401 aa10.73□□□□□ -0.69
PCDH9-205ENST00000614931 RREB1Q92766 1687 aa10.73□□□□□ -0.69
PCDH9-205ENST00000614931 EXOC5O00471 708 aa10.72□□□□□ -0.69
PCDH9-205ENST00000614931 U2SURPO15042 1029 aaKnown RBP10.72□□□□□ -0.69
PCDH9-205ENST00000614931 LTV1Q96GA3 475 aaPredicted RBP10.72□□□□□ -0.69
PCDH9-205ENST00000614931 VIRMAQ69YN4 1812 aaKnown RBP10.72□□□□□ -0.69
PCDH9-205ENST00000614931 PSDA5PKW4 1024 aaPredicted RBP10.71□□□□□ -0.69
PCDH9-205ENST00000614931 RGPD3A6NKT7 1758 aaPredicted RBP10.71□□□□□ -0.69
PCDH9-205ENST00000614931 U2AF1L5P0DN76 240 aaPredicted RBP10.71□□□□□ -0.69
PCDH9-205ENST00000614931 IL2RBP14784 551 aa10.71□□□□□ -0.69
PCDH9-205ENST00000614931 U2AF1Q01081 240 aaKnown RBP eCLIP10.71□□□□□ -0.69
PCDH9-205ENST00000614931 NUP188Q5SRE5 1749 aa10.71□□□□□ -0.69
PCDH9-205ENST00000614931 TNS2Q63HR2 1409 aa10.71□□□□□ -0.69
PCDH9-205ENST00000614931 RGPD4Q7Z3J3 1758 aa10.71□□□□□ -0.69
PCDH9-205ENST00000614931 AEBP1Q8IUX7 1158 aa10.71□□□□□ -0.69
PCDH9-205ENST00000614931 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.69
PCDH9-205ENST00000614931 IGSF1Q8N6C5 1336 aa10.71□□□□□ -0.69
PCDH9-205ENST00000614931 EYA1Q99502 592 aa10.71□□□□□ -0.69
PCDH9-205ENST00000614931 BCL11BQ9C0K0 894 aaPredicted RBP10.71□□□□□ -0.69
PCDH9-205ENST00000614931 PLSCR1O15162 318 aa10.7□□□□□ -0.7
PCDH9-205ENST00000614931 HMOX1P09601 288 aa10.7□□□□□ -0.7
PCDH9-205ENST00000614931 PTF1AQ7RTS3 328 aa10.7□□□□□ -0.7
PCDH9-205ENST00000614931 RSPH6AQ9H0K4 717 aa10.7□□□□□ -0.7
PCDH9-205ENST00000614931 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
PCDH9-205ENST00000614931 LRP5O75197 1615 aa10.69□□□□□ -0.7
PCDH9-205ENST00000614931 KDRP35968 1356 aa10.69□□□□□ -0.7
PCDH9-205ENST00000614931 R3HDM1Q15032 1099 aaKnown RBP10.69□□□□□ -0.7
PCDH9-205ENST00000614931 USHBP1Q8N6Y0 703 aa10.69□□□□□ -0.7
PCDH9-205ENST00000614931 PLEKHF1Q96S99 279 aa10.69□□□□□ -0.7
PCDH9-205ENST00000614931 SHANK3Q9BYB0 1731 aa10.69□□□□□ -0.7
PCDH9-205ENST00000614931 PKD1L3Q7Z443 1732 aa10.68□□□□□ -0.7
PCDH9-205ENST00000614931 HNRNPUQ00839 825 aaKnown RBP eCLIP10.68□□□□□ -0.7
PCDH9-205ENST00000614931 NBPF6Q5VWK0 638 aa10.68□□□□□ -0.7
PCDH9-205ENST00000614931 NBPF4Q96M43 638 aa10.68□□□□□ -0.7
PCDH9-205ENST00000614931 NHSQ6T4R5 1651 aa10.67□□□□□ -0.7
PCDH9-205ENST00000614931 PRKAR2BP31323 418 aa10.67□□□□□ -0.7
PCDH9-205ENST00000614931 SULT6B1Q6IMI4 303 aa10.67□□□□□ -0.7
PCDH9-205ENST00000614931 APAF1O14727 1248 aa10.66□□□□□ -0.7
PCDH9-205ENST00000614931 FCHSD2O94868 740 aa10.66□□□□□ -0.7
PCDH9-205ENST00000614931 NBPF14Q5TI25 921 aa10.66□□□□□ -0.7
PCDH9-205ENST00000614931 PROM2Q8N271 834 aa10.66□□□□□ -0.7
PCDH9-205ENST00000614931 RUNDC1Q96C34 613 aa10.66□□□□□ -0.7
PCDH9-205ENST00000614931 PHACTR3Q96KR7 559 aa10.66□□□□□ -0.7
PCDH9-205ENST00000614931 MEGF6O75095 1541 aa10.66□□□□□ -0.7
PCDH9-205ENST00000614931 KCNQ2O43526 872 aa10.65□□□□□ -0.7
PCDH9-205ENST00000614931 RRP7AQ9Y3A4 280 aaKnown RBP10.64□□□□□ -0.71
PCDH9-205ENST00000614931 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
PCDH9-205ENST00000614931 ZBED9Q6R2W3 1325 aa10.63□□□□□ -0.71
PCDH9-205ENST00000614931 TXNRD1Q16881 649 aa10.63□□□□□ -0.71
PCDH9-205ENST00000614931 ZCRB1Q8TBF4 217 aaKnown RBP10.63□□□□□ -0.71
PCDH9-205ENST00000614931 DDX54Q8TDD1 881 aaKnown RBP10.63□□□□□ -0.71
PCDH9-205ENST00000614931 ACSBG1Q96GR2 724 aa10.63□□□□□ -0.71
PCDH9-205ENST00000614931 SRCAPQ6ZRS2 3230 aa10.63□□□□□ -0.71
PCDH9-205ENST00000614931 ZNF521Q96K83 1311 aa10.62□□□□□ -0.71
PCDH9-205ENST00000614931 TMPOP42166 694 aaKnown RBP10.62□□□□□ -0.71
PCDH9-205ENST00000614931 BTAF1O14981 1849 aa10.62□□□□□ -0.71
PCDH9-205ENST00000614931 ADAMTS7Q9UKP4 1686 aa10.62□□□□□ -0.71
PCDH9-205ENST00000614931 SCN11AQ9UI33 1791 aa10.62□□□□□ -0.71
PCDH9-205ENST00000614931 MAPK8IP3Q9UPT6 1336 aa10.61□□□□□ -0.71
PCDH9-205ENST00000614931 NFE2L2Q16236 605 aa10.61□□□□□ -0.71
PCDH9-205ENST00000614931 RAPGEF4Q8WZA2 1011 aa10.61□□□□□ -0.71
PCDH9-205ENST00000614931 ANO8Q9HCE9 1232 aaPredicted RBP10.61□□□□□ -0.71
PCDH9-205ENST00000614931 SIPA1L3O60292 1781 aaPredicted RBP10.61□□□□□ -0.71
PCDH9-205ENST00000614931 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
PCDH9-205ENST00000614931 MTHFSDQ2M296 383 aaKnown RBP10.6□□□□□ -0.71
PCDH9-205ENST00000614931 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
PCDH9-205ENST00000614931 CASZ1Q86V15 1759 aa10.6□□□□□ -0.71
PCDH9-205ENST00000614931 DOT1LQ8TEK3 1739 aa10.59□□□□□ -0.71
PCDH9-205ENST00000614931 TOGARAM1Q9Y4F4 1720 aa10.59□□□□□ -0.71
PCDH9-205ENST00000614931 TATP17735 454 aaPredicted RBP10.59□□□□□ -0.71
PCDH9-205ENST00000614931 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
PCDH9-205ENST00000614931 PAPPAQ13219 1627 aa10.58□□□□□ -0.72
PCDH9-205ENST00000614931 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.72
PCDH9-205ENST00000614931 WWC1Q8IX03 1113 aa10.58□□□□□ -0.72
PCDH9-205ENST00000614931 SPINK5Q9NQ38 1064 aaPredicted RBP10.58□□□□□ -0.72
PCDH9-205ENST00000614931 RIPK4P57078 832 aa10.57□□□□□ -0.72
PCDH9-205ENST00000614931 SLC15A2Q16348 729 aa10.57□□□□□ -0.72
PCDH9-205ENST00000614931 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
PCDH9-205ENST00000614931 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
PCDH9-205ENST00000614931 THUMPD2Q9BTF0 503 aaKnown RBP10.57□□□□□ -0.72
PCDH9-205ENST00000614931 PDGFDQ9GZP0 370 aaPredicted RBP10.57□□□□□ -0.72
PCDH9-205ENST00000614931 SPON1Q9HCB6 807 aa10.57□□□□□ -0.72
PCDH9-205ENST00000614931 STK32BQ9NY57 414 aa10.57□□□□□ -0.72
PCDH9-205ENST00000614931 PCDH11XQ9BZA7 1347 aa10.57□□□□□ -0.72
PCDH9-205ENST00000614931 PCDH11YQ9BZA8 1340 aa10.57□□□□□ -0.72
PCDH9-205ENST00000614931 ITGB4P16144 1822 aa10.56□□□□□ -0.72
PCDH9-205ENST00000614931 KAT6BQ8WYB5 2073 aa10.56□□□□□ -0.72
PCDH9-205ENST00000614931 LY75O60449 1722 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms