RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 MAPK8IP3Q9UPT6 1336 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 NEFMP07197 916 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 LMOD3Q0VAK6 560 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 AEBP1Q8IUX7 1158 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 GAS2L2Q8NHY3 880 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 SPATA31A1Q5TZJ5 1347 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 TNS2Q63HR2 1409 aa8.24□□□□□ -1.09
CBWD3-210ENST00000614398 TCP11L2Q8N4U5 519 aa8.23□□□□□ -1.09
CBWD3-210ENST00000614398 TMPOP42166 694 aaKnown RBP8.23□□□□□ -1.09
CBWD3-210ENST00000614398 PAPPAQ13219 1627 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 PLEKHO1Q53GL0 409 aaPredicted RBP8.22□□□□□ -1.09
CBWD3-210ENST00000614398 LARP1Q6PKG0 1096 aaKnown RBP8.22□□□□□ -1.09
CBWD3-210ENST00000614398 WDR63Q8IWG1 891 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 NLRP2Q9NX02 1062 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 MAP3K5Q99683 1374 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 BCL9O00512 1426 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 KDM3BQ7LBC6 1761 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 NUTM2BA6NNL0 878 aaPredicted RBP8.22□□□□□ -1.09
CBWD3-210ENST00000614398 NUTM2EB1AL46 878 aaPredicted RBP8.22□□□□□ -1.09
CBWD3-210ENST00000614398 ADAMTS2O95450 1211 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 HMOX1P09601 288 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 CSB-PGBD3P0DP91 1061 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 TATP17735 454 aaPredicted RBP8.22□□□□□ -1.09
CBWD3-210ENST00000614398 EVA1CP58658 441 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 NUTM2AQ8IVF1 878 aaPredicted RBP8.22□□□□□ -1.09
CBWD3-210ENST00000614398 LTV1Q96GA3 475 aaPredicted RBP8.22□□□□□ -1.09
CBWD3-210ENST00000614398 PHACTR3Q96KR7 559 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 DAXXQ9UER7 740 aaPredicted RBP8.22□□□□□ -1.09
CBWD3-210ENST00000614398 CEMIPQ8WUJ3 1361 aa8.22□□□□□ -1.09
CBWD3-210ENST00000614398 APAF1O14727 1248 aa8.21□□□□□ -1.09
CBWD3-210ENST00000614398 IL2RBP14784 551 aa8.21□□□□□ -1.09
CBWD3-210ENST00000614398 TOM1L2Q6ZVM7 507 aa8.21□□□□□ -1.09
CBWD3-210ENST00000614398 ONECUT3O60422 494 aaPredicted RBP8.21□□□□□ -1.1
CBWD3-210ENST00000614398 HNRNPUQ00839 825 aaKnown RBP eCLIP8.21□□□□□ -1.1
CBWD3-210ENST00000614398 CALD1Q05682 793 aaKnown RBP8.21□□□□□ -1.1
CBWD3-210ENST00000614398 NKX1-1Q15270 411 aaPredicted RBP8.21□□□□□ -1.1
CBWD3-210ENST00000614398 CCDC146Q8IYE0 955 aa8.21□□□□□ -1.1
CBWD3-210ENST00000614398 RAPGEF4Q8WZA2 1011 aa8.21□□□□□ -1.1
CBWD3-210ENST00000614398 BABAM1Q9NWV8 329 aa8.21□□□□□ -1.1
CBWD3-210ENST00000614398 TRIM35Q9UPQ4 493 aa8.21□□□□□ -1.1
CBWD3-210ENST00000614398 SPG7Q9UQ90 795 aa8.21□□□□□ -1.1
CBWD3-210ENST00000614398 CICQ96RK0 1608 aaPredicted RBP8.21□□□□□ -1.1
CBWD3-210ENST00000614398 TOGARAM1Q9Y4F4 1720 aa8.21□□□□□ -1.1
CBWD3-210ENST00000614398 AFF2P51816 1311 aa8.2□□□□□ -1.1
CBWD3-210ENST00000614398 AKAP4Q5JQC9 854 aa8.2□□□□□ -1.1
CBWD3-210ENST00000614398 NGLY1Q96IV0 654 aa8.2□□□□□ -1.1
CBWD3-210ENST00000614398 PCDH11XQ9BZA7 1347 aa8.2□□□□□ -1.1
CBWD3-210ENST00000614398 PCDH11YQ9BZA8 1340 aa8.2□□□□□ -1.1
CBWD3-210ENST00000614398 MTHFSDQ2M296 383 aaKnown RBP8.2□□□□□ -1.1
CBWD3-210ENST00000614398 TRMT2AQ8IZ69 625 aaKnown RBP8.2□□□□□ -1.1
CBWD3-210ENST00000614398 TRPC5Q9UL62 973 aaPredicted RBP8.2□□□□□ -1.1
CBWD3-210ENST00000614398 HSP90AB1P08238 724 aaKnown RBP8.19□□□□□ -1.1
CBWD3-210ENST00000614398 MEX3CQ5U5Q3 659 aaKnown RBP8.19□□□□□ -1.1
CBWD3-210ENST00000614398 WWC1Q8IX03 1113 aa8.19□□□□□ -1.1
CBWD3-210ENST00000614398 USHBP1Q8N6Y0 703 aa8.19□□□□□ -1.1
CBWD3-210ENST00000614398 C8orf37Q96NL8 207 aa8.19□□□□□ -1.1
CBWD3-210ENST00000614398 USP21Q9UK80 565 aa8.19□□□□□ -1.1
CBWD3-210ENST00000614398 ZNF772Q68DY9 489 aaPredicted RBP8.19□□□□□ -1.1
CBWD3-210ENST00000614398 STRN4Q9NRL3 753 aa8.19□□□□□ -1.1
CBWD3-210ENST00000614398 UBR2Q8IWV8 1755 aa8.19□□□□□ -1.1
CBWD3-210ENST00000614398 ZNF831Q5JPB2 1677 aa8.19□□□□□ -1.1
CBWD3-210ENST00000614398 GNAT3A8MTJ3 354 aa8.18□□□□□ -1.1
CBWD3-210ENST00000614398 PLEKHG5O94827 1062 aa8.18□□□□□ -1.1
CBWD3-210ENST00000614398 RIPK4P57078 832 aa8.18□□□□□ -1.1
CBWD3-210ENST00000614398 KDM6AO15550 1401 aaPredicted RBP8.18□□□□□ -1.1
CBWD3-210ENST00000614398 ZNF853P0CG23 659 aa8.18□□□□□ -1.1
CBWD3-210ENST00000614398 ZCRB1Q8TBF4 217 aaKnown RBP8.18□□□□□ -1.1
CBWD3-210ENST00000614398 NHSQ6T4R5 1651 aa8.18□□□□□ -1.1
CBWD3-210ENST00000614398 E9PSI1 815 aa8.17□□□□□ -1.1
CBWD3-210ENST00000614398 PHKG2P15735 406 aa8.17□□□□□ -1.1
CBWD3-210ENST00000614398 ZNF530Q6P9A1 599 aaPredicted RBP8.17□□□□□ -1.1
CBWD3-210ENST00000614398 IFNL2Q8IZJ0 200 aa8.17□□□□□ -1.1
CBWD3-210ENST00000614398 IFT57Q9NWB7 429 aa8.17□□□□□ -1.1
CBWD3-210ENST00000614398 DOT1LQ8TEK3 1739 aa8.17□□□□□ -1.1
CBWD3-210ENST00000614398 SOS1Q07889 1333 aaPredicted RBP8.17□□□□□ -1.1
CBWD3-210ENST00000614398 ITGB4P16144 1822 aa8.17□□□□□ -1.1
CBWD3-210ENST00000614398 GOLGA2Q08379 1002 aa8.17□□□□□ -1.1
CBWD3-210ENST00000614398 SLFN5Q08AF3 891 aa8.17□□□□□ -1.1
CBWD3-210ENST00000614398 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
CBWD3-210ENST00000614398 DCAF5Q96JK2 942 aa8.16□□□□□ -1.1
CBWD3-210ENST00000614398 CYP27B1O15528 508 aa8.16□□□□□ -1.1
CBWD3-210ENST00000614398 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
CBWD3-210ENST00000614398 SBF2Q86WG5 1849 aa8.16□□□□□ -1.1
CBWD3-210ENST00000614398 LAMB4A4D0S4 1761 aa8.16□□□□□ -1.1
CBWD3-210ENST00000614398 RNMTO43148 476 aaKnown RBP8.16□□□□□ -1.1
CBWD3-210ENST00000614398 CT47B1P0C2W7 299 aaPredicted RBP8.16□□□□□ -1.1
CBWD3-210ENST00000614398 GNAI1P63096 354 aa8.16□□□□□ -1.1
CBWD3-210ENST00000614398 BRWD3Q6RI45 1802 aa8.15□□□□□ -1.1
CBWD3-210ENST00000614398 ERVV-2B6SEH9 535 aa8.15□□□□□ -1.1
CBWD3-210ENST00000614398 CFAP44Q96MT7 982 aa8.15□□□□□ -1.1
CBWD3-210ENST00000614398 MYH16Q9H6N6 1097 aa8.15□□□□□ -1.1
CBWD3-210ENST00000614398 CHL1O00533 1208 aa8.15□□□□□ -1.11
CBWD3-210ENST00000614398 IL17REQ8NFR9 667 aa8.15□□□□□ -1.11
CBWD3-210ENST00000614398 RTF1Q92541 710 aaKnown RBP8.15□□□□□ -1.11
CBWD3-210ENST00000614398 RRP7AQ9Y3A4 280 aaKnown RBP8.15□□□□□ -1.11
CBWD3-210ENST00000614398 RGPD3A6NKT7 1758 aaPredicted RBP8.14□□□□□ -1.11
CBWD3-210ENST00000614398 RGPD4Q7Z3J3 1758 aa8.14□□□□□ -1.11
CBWD3-210ENST00000614398 EXOC5O00471 708 aa8.14□□□□□ -1.11
CBWD3-210ENST00000614398 RBM6P78332 1123 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms