RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TESK2Q96S53 571 aa33.24■■■□□ 2.91
MMP28-203ENST00000612672 KLHL34Q8N239 644 aa33.22■■■□□ 2.91
MMP28-203ENST00000612672 SYTL4Q96C24 671 aaPredicted RBP33.22■■■□□ 2.91
MMP28-203ENST00000612672 NLGN2Q8NFZ4 835 aa33.21■■■□□ 2.91
MMP28-203ENST00000612672 PUS7Q96PZ0 661 aaKnown RBP33.21■■■□□ 2.91
MMP28-203ENST00000612672 SLC16A10Q8TF71 515 aa33.2■■■□□ 2.91
MMP28-203ENST00000612672 GPR162Q16538 588 aa33.19■■■□□ 2.9
MMP28-203ENST00000612672 TFCP2L1Q9NZI6 479 aa33.18■■■□□ 2.9
MMP28-203ENST00000612672 C1QTNF8P60827 252 aa33.17■■■□□ 2.9
MMP28-203ENST00000612672 CEP350Q5VT06 3117 aa33.17■■■□□ 2.9
MMP28-203ENST00000612672 COG3Q96JB2 828 aa33.16■■■□□ 2.9
MMP28-203ENST00000612672 C5P01031 1676 aa33.16■■■□□ 2.9
MMP28-203ENST00000612672 ZCRB1Q8TBF4 217 aaKnown RBP33.15■■■□□ 2.9
MMP28-203ENST00000612672 TONSLQ96HA7 1378 aa33.14■■■□□ 2.9
MMP28-203ENST00000612672 SENP3-EIF4A1A0A087X0R7 540 aa33.14■■■□□ 2.9
MMP28-203ENST00000612672 ST20-MTHFSA0A0A6YYL1 179 aa33.14■■■□□ 2.9
MMP28-203ENST00000612672 POLD1P28340 1107 aa33.14■■■□□ 2.9
MMP28-203ENST00000612672 USHBP1Q8N6Y0 703 aa33.14■■■□□ 2.9
MMP28-203ENST00000612672 AMPHP49418 695 aa33.13■■■□□ 2.89
MMP28-203ENST00000612672 TAF1LQ8IZX4 1826 aa33.13■■■□□ 2.89
MMP28-203ENST00000612672 TOGARAM1Q9Y4F4 1720 aa33.12■■■□□ 2.89
MMP28-203ENST00000612672 RRS1Q15050 365 aaKnown RBP33.12■■■□□ 2.89
MMP28-203ENST00000612672 NBPF6Q5VWK0 638 aa33.12■■■□□ 2.89
MMP28-203ENST00000612672 PELP1Q8IZL8 1130 aaKnown RBP33.12■■■□□ 2.89
MMP28-203ENST00000612672 NBPF4Q96M43 638 aa33.12■■■□□ 2.89
MMP28-203ENST00000612672 RTL1A6NKG5 1358 aa33.1■■■□□ 2.89
MMP28-203ENST00000612672 CCNL1Q9UK58 526 aaPredicted RBP33.1■■■□□ 2.89
MMP28-203ENST00000612672 COL23A1Q86Y22 540 aaPredicted RBP33.09■■■□□ 2.89
MMP28-203ENST00000612672 KIF20BQ96Q89 1820 aa33.09■■■□□ 2.89
MMP28-203ENST00000612672 YBX3P16989 372 aaKnown RBP eCLIP33.08■■■□□ 2.89
MMP28-203ENST00000612672 GGNBP2Q9H3C7 697 aa33.05■■■□□ 2.88
MMP28-203ENST00000612672 ITGB4P16144 1822 aa33.05■■■□□ 2.88
MMP28-203ENST00000612672 MSL1Q68DK7 614 aa33.04■■■□□ 2.88
MMP28-203ENST00000612672 USP47Q96K76 1375 aa33.04■■■□□ 2.88
MMP28-203ENST00000612672 FYB1O15117 783 aa33.03■■■□□ 2.88
MMP28-203ENST00000612672 PKD1L3Q7Z443 1732 aa32.99■■■□□ 2.87
MMP28-203ENST00000612672 MSH5O43196 834 aa32.99■■■□□ 2.87
MMP28-203ENST00000612672 GIGYF1O75420 1035 aaPredicted RBP32.98■■■□□ 2.87
MMP28-203ENST00000612672 C4BP0C0L5 1744 aa32.98■■■□□ 2.87
MMP28-203ENST00000612672 HSP90AB2PQ58FF8 381 aa32.98■■■□□ 2.87
MMP28-203ENST00000612672 AMIGO3Q86WK7 504 aa32.97■■■□□ 2.87
MMP28-203ENST00000612672 UBR3Q6ZT12 1888 aa32.97■■■□□ 2.87
MMP28-203ENST00000612672 CGNL1Q0VF96 1302 aa32.96■■■□□ 2.87
MMP28-203ENST00000612672 SMG6Q86US8 1419 aaKnown RBP32.95■■■□□ 2.87
MMP28-203ENST00000612672 INSRP06213 1382 aa32.95■■■□□ 2.86
MMP28-203ENST00000612672 PALLDQ8WX93 1383 aa32.95■■■□□ 2.86
MMP28-203ENST00000612672 RAPGEF4Q8WZA2 1011 aa32.94■■■□□ 2.86
MMP28-203ENST00000612672 MAP2P11137 1827 aaKnown RBP32.93■■■□□ 2.86
MMP28-203ENST00000612672 CYP27B1O15528 508 aa32.93■■■□□ 2.86
MMP28-203ENST00000612672 TATP17735 454 aaPredicted RBP32.92■■■□□ 2.86
MMP28-203ENST00000612672 SMIM5Q71RC9 77 aa32.91■■■□□ 2.86
MMP28-203ENST00000612672 PCDH11XQ9BZA7 1347 aa32.91■■■□□ 2.86
MMP28-203ENST00000612672 PCDH11YQ9BZA8 1340 aa32.91■■■□□ 2.86
MMP28-203ENST00000612672 FLT4P35916 1363 aa32.91■■■□□ 2.86
MMP28-203ENST00000612672 ANKRD26Q9UPS8 1709 aa32.91■■■□□ 2.86
MMP28-203ENST00000612672 ATP10DQ9P241 1426 aa32.89■■■□□ 2.86
MMP28-203ENST00000612672 NCAPD2Q15021 1401 aa32.88■■■□□ 2.85
MMP28-203ENST00000612672 MPRIPQ6WCQ1 1025 aa32.88■■■□□ 2.85
MMP28-203ENST00000612672 GRIN3BO60391 1043 aa32.87■■■□□ 2.85
MMP28-203ENST00000612672 EMILIN1Q9Y6C2 1016 aa32.86■■■□□ 2.85
MMP28-203ENST00000612672 TMF1P82094 1093 aa32.83■■■□□ 2.85
MMP28-203ENST00000612672 CARD14Q9BXL6 1004 aa32.83■■■□□ 2.85
MMP28-203ENST00000612672 ADCY9O60503 1353 aa32.83■■■□□ 2.85
MMP28-203ENST00000612672 KIF24Q5T7B8 1368 aa32.83■■■□□ 2.85
MMP28-203ENST00000612672 CD2APQ9Y5K6 639 aa32.82■■■□□ 2.84
MMP28-203ENST00000612672 SLC24A1O60721 1099 aa32.8■■■□□ 2.84
MMP28-203ENST00000612672 PIGBQ92521 554 aa32.8■■■□□ 2.84
MMP28-203ENST00000612672 NSD3Q9BZ95 1437 aa32.79■■■□□ 2.84
MMP28-203ENST00000612672 PHF14O94880 888 aa32.77■■■□□ 2.84
MMP28-203ENST00000612672 FLAD1Q8NFF5 587 aa32.77■■■□□ 2.84
MMP28-203ENST00000612672 WWC3Q9ULE0 1092 aa32.77■■■□□ 2.84
MMP28-203ENST00000612672 LINC00116Q8NCU8 138 aa32.76■■■□□ 2.83
MMP28-203ENST00000612672 AK7Q96M32 723 aa32.76■■■□□ 2.83
MMP28-203ENST00000612672 KIAA1551Q9HCM1 1747 aa32.75■■■□□ 2.83
MMP28-203ENST00000612672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.74■■■□□ 2.83
MMP28-203ENST00000612672 NKX1-1Q15270 411 aaPredicted RBP32.74■■■□□ 2.83
MMP28-203ENST00000612672 SMARCC1Q92922 1105 aaPredicted RBP32.73■■■□□ 2.83
MMP28-203ENST00000612672 IGSF1Q8N6C5 1336 aa32.73■■■□□ 2.83
MMP28-203ENST00000612672 ITPK1Q13572 414 aa32.7■■■□□ 2.83
MMP28-203ENST00000612672 LOC102724428A0A0B4J2F2 783 aa32.69■■■□□ 2.82
MMP28-203ENST00000612672 SIK1P57059 783 aa32.69■■■□□ 2.82
MMP28-203ENST00000612672 ZNF526Q8TF50 670 aaPredicted RBP32.69■■■□□ 2.82
MMP28-203ENST00000612672 KIF13BQ9NQT8 1826 aa32.68■■■□□ 2.82
MMP28-203ENST00000612672 EYA1Q99502 592 aa32.68■■■□□ 2.82
MMP28-203ENST00000612672 ASAP1Q9ULH1 1129 aa32.68■■■□□ 2.82
MMP28-203ENST00000612672 CICQ96RK0 1608 aaPredicted RBP32.67■■■□□ 2.82
MMP28-203ENST00000612672 PPM1GO15355 546 aaPredicted RBP32.67■■■□□ 2.82
MMP28-203ENST00000612672 GPBP1L1Q9HC44 474 aaPredicted RBP32.66■■■□□ 2.82
MMP28-203ENST00000612672 N4BP2Q86UW6 1770 aaPredicted RBP32.65■■■□□ 2.82
MMP28-203ENST00000612672 SSFA2P28290 1259 aa32.65■■■□□ 2.82
MMP28-203ENST00000612672 WASHC2AQ641Q2 1341 aa32.65■■■□□ 2.82
MMP28-203ENST00000612672 SPG7Q9UQ90 795 aa32.63■■■□□ 2.81
MMP28-203ENST00000612672 COL5A3P25940 1745 aaPredicted RBP32.63■■■□□ 2.81
MMP28-203ENST00000612672 PHKG2P15735 406 aa32.62■■■□□ 2.81
MMP28-203ENST00000612672 KDRP35968 1356 aa32.61■■■□□ 2.81
MMP28-203ENST00000612672 GNPATO15228 680 aa32.61■■■□□ 2.81
MMP28-203ENST00000612672 CDCA8Q53HL2 280 aa32.61■■■□□ 2.81
MMP28-203ENST00000612672 TMOD3Q9NYL9 352 aa32.61■■■□□ 2.81
MMP28-203ENST00000612672 POLKQ9UBT6 870 aa32.6■■■□□ 2.81
MMP28-203ENST00000612672 PXDNLA1KZ92 1463 aa32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms