RNA–Protein interactions for RNA: ENST00000612553.4

PMPCA-207, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 1,174 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-207ENST00000612553 CGNL1Q0VF96 1302 aa28.68■■■□□ 2.18
PMPCA-207ENST00000612553 SHANK3Q9BYB0 1731 aa28.66■■■□□ 2.18
PMPCA-207ENST00000612553 USHBP1Q8N6Y0 703 aa28.66■■■□□ 2.18
PMPCA-207ENST00000612553 RAPGEF4Q8WZA2 1011 aa28.66■■■□□ 2.18
PMPCA-207ENST00000612553 PPP1R1BQ9UD71 204 aaPredicted RBP28.66■■■□□ 2.18
PMPCA-207ENST00000612553 HSPA5P11021 654 aaKnown RBP28.65■■■□□ 2.18
PMPCA-207ENST00000612553 PDGFDQ9GZP0 370 aaPredicted RBP28.64■■■□□ 2.18
PMPCA-207ENST00000612553 EMILIN1Q9Y6C2 1016 aa28.64■■■□□ 2.18
PMPCA-207ENST00000612553 DOT1LQ8TEK3 1739 aa28.63■■■□□ 2.17
PMPCA-207ENST00000612553 TATP17735 454 aaPredicted RBP28.62■■■□□ 2.17
PMPCA-207ENST00000612553 SYTL4Q96C24 671 aaPredicted RBP28.62■■■□□ 2.17
PMPCA-207ENST00000612553 PRIM1P49642 420 aaKnown RBP28.61■■■□□ 2.17
PMPCA-207ENST00000612553 PAPPAQ13219 1627 aa28.61■■■□□ 2.17
PMPCA-207ENST00000612553 PPM1GO15355 546 aaPredicted RBP28.59■■■□□ 2.17
PMPCA-207ENST00000612553 ZBTB7AO95365 584 aa28.59■■■□□ 2.17
PMPCA-207ENST00000612553 ANKRD26Q9UPS8 1709 aa28.59■■■□□ 2.17
PMPCA-207ENST00000612553 MAP2P11137 1827 aaKnown RBP28.58■■■□□ 2.17
PMPCA-207ENST00000612553 SLC27A3Q5K4L6 730 aa28.58■■■□□ 2.17
PMPCA-207ENST00000612553 LRRC4BQ9NT99 713 aa28.58■■■□□ 2.17
PMPCA-207ENST00000612553 WASHC2AQ641Q2 1341 aa28.56■■■□□ 2.16
PMPCA-207ENST00000612553 NSD2O96028 1365 aa28.55■■■□□ 2.16
PMPCA-207ENST00000612553 PCDH11XQ9BZA7 1347 aa28.55■■■□□ 2.16
PMPCA-207ENST00000612553 PCDH11YQ9BZA8 1340 aa28.55■■■□□ 2.16
PMPCA-207ENST00000612553 ATF5Q9Y2D1 282 aaPredicted RBP28.54■■■□□ 2.16
PMPCA-207ENST00000612553 MTFR1LQ9H019 292 aa28.53■■■□□ 2.16
PMPCA-207ENST00000612553 PANK3Q9H999 370 aa28.53■■■□□ 2.16
PMPCA-207ENST00000612553 POLKQ9UBT6 870 aa28.53■■■□□ 2.16
PMPCA-207ENST00000612553 PTGER2P43116 358 aa28.52■■■□□ 2.16
PMPCA-207ENST00000612553 ZNF827Q17R98 1081 aa28.52■■■□□ 2.16
PMPCA-207ENST00000612553 LY75O60449 1722 aa28.52■■■□□ 2.16
PMPCA-207ENST00000612553 NCAPD2Q15021 1401 aa28.51■■■□□ 2.15
PMPCA-207ENST00000612553 AKT1S1Q96B36 256 aa28.5■■■□□ 2.15
PMPCA-207ENST00000612553 TNNT2P45379 298 aaPredicted RBP28.49■■■□□ 2.15
PMPCA-207ENST00000612553 PKD1L3Q7Z443 1732 aa28.48■■■□□ 2.15
PMPCA-207ENST00000612553 CYP27B1O15528 508 aa28.47■■■□□ 2.15
PMPCA-207ENST00000612553 EYA1Q99502 592 aa28.47■■■□□ 2.15
PMPCA-207ENST00000612553 KCNQ4P56696 695 aa28.46■■■□□ 2.15
PMPCA-207ENST00000612553 QSER1Q2KHR3 1735 aa28.46■■■□□ 2.15
PMPCA-207ENST00000612553 DCAF8L1A6NGE4 600 aa28.45■■■□□ 2.14
PMPCA-207ENST00000612553 CCNL1Q9UK58 526 aaPredicted RBP28.45■■■□□ 2.14
PMPCA-207ENST00000612553 SPG7Q9UQ90 795 aa28.45■■■□□ 2.14
PMPCA-207ENST00000612553 SGIP1Q9BQI5 828 aa28.44■■■□□ 2.14
PMPCA-207ENST00000612553 TFCP2L1Q9NZI6 479 aa28.43■■■□□ 2.14
PMPCA-207ENST00000612553 SLC16A10Q8TF71 515 aa28.42■■■□□ 2.14
PMPCA-207ENST00000612553 EIF4A2Q14240 407 aaKnown RBP28.41■■■□□ 2.14
PMPCA-207ENST00000612553 MPRIPQ6WCQ1 1025 aa28.41■■■□□ 2.14
PMPCA-207ENST00000612553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.41■■■□□ 2.148e-7■■□□□ 13.3
PMPCA-207ENST00000612553 PNPLA7Q6ZV29 1317 aa28.41■■■□□ 2.14
PMPCA-207ENST00000612553 NKX1-1Q15270 411 aaPredicted RBP28.39■■■□□ 2.14
PMPCA-207ENST00000612553 TOGARAM1Q9Y4F4 1720 aa28.39■■■□□ 2.14
PMPCA-207ENST00000612553 ITGB4P16144 1822 aa28.39■■■□□ 2.13
PMPCA-207ENST00000612553 TUBGCP6Q96RT7 1819 aa28.39■■■□□ 2.13
PMPCA-207ENST00000612553 MORC1Q86VD1 984 aa28.38■■■□□ 2.13
PMPCA-207ENST00000612553 ARXQ96QS3 562 aa28.38■■■□□ 2.13
PMPCA-207ENST00000612553 FHDC1Q9C0D6 1143 aaPredicted RBP28.38■■■□□ 2.13
PMPCA-207ENST00000612553 KNSTRNQ9Y448 316 aa28.38■■■□□ 2.13
PMPCA-207ENST00000612553 HMGB2P26583 209 aaKnown RBP28.37■■■□□ 2.13
PMPCA-207ENST00000612553 SYT17Q9BSW7 474 aa28.36■■■□□ 2.13
PMPCA-207ENST00000612553 PALLDQ8WX93 1383 aa28.36■■■□□ 2.13
PMPCA-207ENST00000612553 PLEKHG2Q9H7P9 1386 aa28.35■■■□□ 2.13
PMPCA-207ENST00000612553 IFNL2Q8IZJ0 200 aa28.34■■■□□ 2.13
PMPCA-207ENST00000612553 SMARCC1Q92922 1105 aaPredicted RBP28.34■■■□□ 2.13
PMPCA-207ENST00000612553 C5P01031 1676 aa28.34■■■□□ 2.13
PMPCA-207ENST00000612553 IGSF1Q8N6C5 1336 aa28.34■■■□□ 2.13
PMPCA-207ENST00000612553 KIF7Q2M1P5 1343 aa28.33■■■□□ 2.13
PMPCA-207ENST00000612553 PIGBQ92521 554 aa28.32■■■□□ 2.12
PMPCA-207ENST00000612553 COL24A1Q17RW2 1714 aa28.32■■■□□ 2.12
PMPCA-207ENST00000612553 PHKG2P15735 406 aa28.31■■■□□ 2.12
PMPCA-207ENST00000612553 POLD1P28340 1107 aa28.31■■■□□ 2.12
PMPCA-207ENST00000612553 TAF1LQ8IZX4 1826 aa28.3■■■□□ 2.12
PMPCA-207ENST00000612553 MAP3K5Q99683 1374 aa28.29■■■□□ 2.12
PMPCA-207ENST00000612553 YY1P25490 414 aa28.29■■■□□ 2.12
PMPCA-207ENST00000612553 TMOD3Q9NYL9 352 aa28.29■■■□□ 2.12
PMPCA-207ENST00000612553 MSH5O43196 834 aa28.28■■■□□ 2.12
PMPCA-207ENST00000612553 COL23A1Q86Y22 540 aaPredicted RBP28.27■■■□□ 2.12
PMPCA-207ENST00000612553 AMER1Q5JTC6 1135 aaPredicted RBP28.26■■■□□ 2.11
PMPCA-207ENST00000612553 PLEKHO1Q53GL0 409 aaPredicted RBP28.24■■■□□ 2.11
PMPCA-207ENST00000612553 FLAD1Q8NFF5 587 aa28.24■■■□□ 2.11
PMPCA-207ENST00000612553 C4BP0C0L5 1744 aa28.23■■■□□ 2.11
PMPCA-207ENST00000612553 AMOTQ4VCS5 1084 aa28.22■■■□□ 2.11
PMPCA-207ENST00000612553 LOC102724428A0A0B4J2F2 783 aa28.21■■■□□ 2.11
PMPCA-207ENST00000612553 HSP90AB1P08238 724 aaKnown RBP28.21■■■□□ 2.11
PMPCA-207ENST00000612553 SIK1P57059 783 aa28.21■■■□□ 2.11
PMPCA-207ENST00000612553 AK7Q96M32 723 aa28.21■■■□□ 2.11
PMPCA-207ENST00000612553 ASAP1Q9ULH1 1129 aa28.21■■■□□ 2.11
PMPCA-207ENST00000612553 KLHL34Q8N239 644 aa28.2■■■□□ 2.1
PMPCA-207ENST00000612553 ERVV-2B6SEH9 535 aa28.19■■■□□ 2.1
PMPCA-207ENST00000612553 AEBP1Q8IUX7 1158 aa28.19■■■□□ 2.1
PMPCA-207ENST00000612553 DCAF5Q96JK2 942 aa28.19■■■□□ 2.1
PMPCA-207ENST00000612553 PER1O15534 1290 aaPredicted RBP28.18■■■□□ 2.1
PMPCA-207ENST00000612553 IL13P35225 146 aa28.18■■■□□ 2.1
PMPCA-207ENST00000612553 ZNF530Q6P9A1 599 aaPredicted RBP28.18■■■□□ 2.1
PMPCA-207ENST00000612553 SULT6B1Q6IMI4 303 aa28.17■■■□□ 2.1
PMPCA-207ENST00000612553 ATG3Q9NT62 314 aa28.17■■■□□ 2.1
PMPCA-207ENST00000612553 UTRNP46939 3433 aa28.17■■■□□ 2.1
PMPCA-207ENST00000612553 KDRP35968 1356 aa28.15■■■□□ 2.1
PMPCA-207ENST00000612553 UBR3Q6ZT12 1888 aa28.15■■■□□ 2.1
PMPCA-207ENST00000612553 ATP6V1AP38606 617 aa28.15■■■□□ 2.1
PMPCA-207ENST00000612553 MSL1Q68DK7 614 aa28.15■■■□□ 2.1
PMPCA-207ENST00000612553 MTHFSP49914 203 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 659 ms