RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 MAPK8IP3Q9UPT6 1336 aa16.99■□□□□ 0.31
PRKN-210ENST00000612540 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
PRKN-210ENST00000612540 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
PRKN-210ENST00000612540 LRP5O75197 1615 aa16.99■□□□□ 0.31
PRKN-210ENST00000612540 SPATA31A1Q5TZJ5 1347 aa16.98■□□□□ 0.31
PRKN-210ENST00000612540 FCHSD2O94868 740 aa16.98■□□□□ 0.31
PRKN-210ENST00000612540 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRKN-210ENST00000612540 LARP1Q6PKG0 1096 aaKnown RBP16.98■□□□□ 0.31
PRKN-210ENST00000612540 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
PRKN-210ENST00000612540 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
PRKN-210ENST00000612540 CRB1P82279 1406 aa16.96■□□□□ 0.31
PRKN-210ENST00000612540 BAG6P46379 1132 aa16.96■□□□□ 0.31
PRKN-210ENST00000612540 FAM182BQ5T319 152 aa16.96■□□□□ 0.31
PRKN-210ENST00000612540 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
PRKN-210ENST00000612540 KDRP35968 1356 aa16.96■□□□□ 0.31
PRKN-210ENST00000612540 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
PRKN-210ENST00000612540 RAPGEF4Q8WZA2 1011 aa16.94■□□□□ 0.3
PRKN-210ENST00000612540 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
PRKN-210ENST00000612540 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
PRKN-210ENST00000612540 APAF1O14727 1248 aa16.93■□□□□ 0.3
PRKN-210ENST00000612540 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
PRKN-210ENST00000612540 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
PRKN-210ENST00000612540 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
PRKN-210ENST00000612540 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
PRKN-210ENST00000612540 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
PRKN-210ENST00000612540 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
PRKN-210ENST00000612540 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
PRKN-210ENST00000612540 DLG5Q8TDM6 1919 aa16.92■□□□□ 0.3
PRKN-210ENST00000612540 MEGF6O75095 1541 aa16.91■□□□□ 0.3
PRKN-210ENST00000612540 PSDA5PKW4 1024 aaPredicted RBP16.91■□□□□ 0.3
PRKN-210ENST00000612540 EN1Q05925 392 aaPredicted RBP16.91■□□□□ 0.3
PRKN-210ENST00000612540 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
PRKN-210ENST00000612540 BARGINQ6ZT62 677 aa16.91■□□□□ 0.3
PRKN-210ENST00000612540 PHACTR3Q96KR7 559 aa16.91■□□□□ 0.3
PRKN-210ENST00000612540 RREB1Q92766 1687 aa16.9■□□□□ 0.3
PRKN-210ENST00000612540 IL2RBP14784 551 aa16.88■□□□□ 0.29
PRKN-210ENST00000612540 TMPOP42166 694 aaKnown RBP16.88■□□□□ 0.29
PRKN-210ENST00000612540 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
PRKN-210ENST00000612540 PLEKHO1Q53GL0 409 aaPredicted RBP16.88■□□□□ 0.29
PRKN-210ENST00000612540 FAM196AQ6ZSG2 479 aa16.88■□□□□ 0.29
PRKN-210ENST00000612540 SBF2Q86WG5 1849 aa16.88■□□□□ 0.29
PRKN-210ENST00000612540 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
PRKN-210ENST00000612540 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
PRKN-210ENST00000612540 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
PRKN-210ENST00000612540 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
PRKN-210ENST00000612540 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
PRKN-210ENST00000612540 TRIM37O94972 964 aa16.86■□□□□ 0.29
PRKN-210ENST00000612540 RIPK4P57078 832 aa16.86■□□□□ 0.29
PRKN-210ENST00000612540 MTHFSDQ2M296 383 aaKnown RBP16.86■□□□□ 0.29
PRKN-210ENST00000612540 THRAP3Q9Y2W1 955 aaKnown RBP16.86■□□□□ 0.29
PRKN-210ENST00000612540 EZH2Q15910 746 aaKnown RBP16.85■□□□□ 0.29
PRKN-210ENST00000612540 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
PRKN-210ENST00000612540 CAMKK2Q96RR4 588 aa16.85■□□□□ 0.29
PRKN-210ENST00000612540 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
PRKN-210ENST00000612540 PDE3BQ13370 1112 aa16.84■□□□□ 0.29
PRKN-210ENST00000612540 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
PRKN-210ENST00000612540 ZBED9Q6R2W3 1325 aa16.84■□□□□ 0.29
PRKN-210ENST00000612540 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.28
PRKN-210ENST00000612540 VIRMAQ69YN4 1812 aaKnown RBP16.83■□□□□ 0.28
PRKN-210ENST00000612540 NGEFQ8N5V2 710 aa16.83■□□□□ 0.28
PRKN-210ENST00000612540 MAP3K5Q99683 1374 aa16.83■□□□□ 0.28
PRKN-210ENST00000612540 PLEKHG2Q9H7P9 1386 aa16.82■□□□□ 0.28
PRKN-210ENST00000612540 R3HDM1Q15032 1099 aaKnown RBP16.82■□□□□ 0.28
PRKN-210ENST00000612540 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
PRKN-210ENST00000612540 RTF1Q92541 710 aaKnown RBP16.82■□□□□ 0.28
PRKN-210ENST00000612540 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
PRKN-210ENST00000612540 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
PRKN-210ENST00000612540 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
PRKN-210ENST00000612540 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
PRKN-210ENST00000612540 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
PRKN-210ENST00000612540 APBA3O96018 575 aa16.81■□□□□ 0.28
PRKN-210ENST00000612540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.28
PRKN-210ENST00000612540 KAT6BQ8WYB5 2073 aa16.81■□□□□ 0.28
PRKN-210ENST00000612540 TNS2Q63HR2 1409 aa16.8■□□□□ 0.28
PRKN-210ENST00000612540 GNAT3A8MTJ3 354 aa16.8■□□□□ 0.28
PRKN-210ENST00000612540 AKAP4Q5JQC9 854 aa16.79■□□□□ 0.28
PRKN-210ENST00000612540 WWC1Q8IX03 1113 aa16.79■□□□□ 0.28
PRKN-210ENST00000612540 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
PRKN-210ENST00000612540 TRIM35Q9UPQ4 493 aa16.79■□□□□ 0.28
PRKN-210ENST00000612540 EXOC5O00471 708 aa16.78■□□□□ 0.28
PRKN-210ENST00000612540 DCTN1Q14203 1278 aa16.78■□□□□ 0.28
PRKN-210ENST00000612540 DDB1Q16531 1140 aa16.78■□□□□ 0.28
PRKN-210ENST00000612540 CCDC27Q2M243 656 aa16.78■□□□□ 0.28
PRKN-210ENST00000612540 MCM10Q7L590 875 aa16.78■□□□□ 0.28
PRKN-210ENST00000612540 IFNL2Q8IZJ0 200 aa16.78■□□□□ 0.28
PRKN-210ENST00000612540 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
PRKN-210ENST00000612540 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.28
PRKN-210ENST00000612540 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.28
PRKN-210ENST00000612540 PHKG2P15735 406 aa16.77■□□□□ 0.28
PRKN-210ENST00000612540 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.27
PRKN-210ENST00000612540 CYP27B1O15528 508 aa16.76■□□□□ 0.27
PRKN-210ENST00000612540 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
PRKN-210ENST00000612540 MPRIPQ6WCQ1 1025 aa16.76■□□□□ 0.27
PRKN-210ENST00000612540 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
PRKN-210ENST00000612540 HSP90AB1P08238 724 aaKnown RBP16.75■□□□□ 0.27
PRKN-210ENST00000612540 CALD1Q05682 793 aaKnown RBP16.75■□□□□ 0.27
PRKN-210ENST00000612540 GOLGA2Q08379 1002 aa16.75■□□□□ 0.27
PRKN-210ENST00000612540 ZNF521Q96K83 1311 aa16.74■□□□□ 0.27
PRKN-210ENST00000612540 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
PRKN-210ENST00000612540 RNMTO43148 476 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms