RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 DCAF8L1A6NGE4 600 aa24.75■■□□□ 1.55
SSBP1-215ENST00000612337 SLC27A3Q5K4L6 730 aa24.75■■□□□ 1.55
SSBP1-215ENST00000612337 CGNL1Q0VF96 1302 aa24.75■■□□□ 1.55
SSBP1-215ENST00000612337 KIF24Q5T7B8 1368 aa24.75■■□□□ 1.55
SSBP1-215ENST00000612337 DOT1LQ8TEK3 1739 aa24.75■■□□□ 1.55
SSBP1-215ENST00000612337 PRIM1P49642 420 aaKnown RBP24.74■■□□□ 1.55
SSBP1-215ENST00000612337 ZNF827Q17R98 1081 aa24.74■■□□□ 1.55
SSBP1-215ENST00000612337 CARD14Q9BXL6 1004 aa24.74■■□□□ 1.55
SSBP1-215ENST00000612337 INSRP06213 1382 aa24.74■■□□□ 1.55
SSBP1-215ENST00000612337 FLT4P35916 1363 aa24.73■■□□□ 1.55
SSBP1-215ENST00000612337 SYTL4Q96C24 671 aaPredicted RBP24.73■■□□□ 1.55
SSBP1-215ENST00000612337 NSD3Q9BZ95 1437 aa24.72■■□□□ 1.55
SSBP1-215ENST00000612337 HSP90AB2PQ58FF8 381 aa24.72■■□□□ 1.55
SSBP1-215ENST00000612337 USHBP1Q8N6Y0 703 aa24.72■■□□□ 1.55
SSBP1-215ENST00000612337 SGIP1Q9BQI5 828 aa24.72■■□□□ 1.55
SSBP1-215ENST00000612337 NSD2O96028 1365 aa24.71■■□□□ 1.55
SSBP1-215ENST00000612337 RAPGEF4Q8WZA2 1011 aa24.71■■□□□ 1.55
SSBP1-215ENST00000612337 AKT1S1Q96B36 256 aa24.71■■□□□ 1.55
SSBP1-215ENST00000612337 YY1P25490 414 aa24.7■■□□□ 1.54
SSBP1-215ENST00000612337 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
SSBP1-215ENST00000612337 LY75O60449 1722 aa24.69■■□□□ 1.54
SSBP1-215ENST00000612337 TATP17735 454 aaPredicted RBP24.68■■□□□ 1.54
SSBP1-215ENST00000612337 QSER1Q2KHR3 1735 aa24.68■■□□□ 1.54
SSBP1-215ENST00000612337 SYT17Q9BSW7 474 aa24.67■■□□□ 1.54
SSBP1-215ENST00000612337 FHDC1Q9C0D6 1143 aaPredicted RBP24.67■■□□□ 1.54
SSBP1-215ENST00000612337 EMILIN1Q9Y6C2 1016 aa24.66■■□□□ 1.54
SSBP1-215ENST00000612337 PCDH11XQ9BZA7 1347 aa24.64■■□□□ 1.54
SSBP1-215ENST00000612337 PCDH11YQ9BZA8 1340 aa24.64■■□□□ 1.54
SSBP1-215ENST00000612337 SLC16A10Q8TF71 515 aa24.64■■□□□ 1.54
SSBP1-215ENST00000612337 ARXQ96QS3 562 aa24.64■■□□□ 1.54
SSBP1-215ENST00000612337 KCNQ4P56696 695 aa24.63■■□□□ 1.53
SSBP1-215ENST00000612337 ANKRD26Q9UPS8 1709 aa24.63■■□□□ 1.53
SSBP1-215ENST00000612337 PNPLA7Q6ZV29 1317 aa24.62■■□□□ 1.53
SSBP1-215ENST00000612337 TFCP2L1Q9NZI6 479 aa24.62■■□□□ 1.53
SSBP1-215ENST00000612337 TUBGCP6Q96RT7 1819 aa24.61■■□□□ 1.53
SSBP1-215ENST00000612337 CCNL1Q9UK58 526 aaPredicted RBP24.61■■□□□ 1.53
SSBP1-215ENST00000612337 MAP3K5Q99683 1374 aa24.61■■□□□ 1.53
SSBP1-215ENST00000612337 NCAPD2Q15021 1401 aa24.61■■□□□ 1.53
SSBP1-215ENST00000612337 MAP2P11137 1827 aaKnown RBP24.59■■□□□ 1.53
SSBP1-215ENST00000612337 PPM1GO15355 546 aaPredicted RBP24.59■■□□□ 1.53
SSBP1-215ENST00000612337 WASHC2AQ641Q2 1341 aa24.59■■□□□ 1.53
SSBP1-215ENST00000612337 COL24A1Q17RW2 1714 aa24.58■■□□□ 1.53
SSBP1-215ENST00000612337 CYP27B1O15528 508 aa24.58■■□□□ 1.53
SSBP1-215ENST00000612337 PKD1L3Q7Z443 1732 aa24.58■■□□□ 1.52
SSBP1-215ENST00000612337 GOLGB1Q14789 3259 aaKnown RBP24.57■■□□□ 1.52
SSBP1-215ENST00000612337 POLR3GLQ9BT43 218 aa24.56■■□□□ 1.52
SSBP1-215ENST00000612337 POLD1P28340 1107 aa24.55■■□□□ 1.52
SSBP1-215ENST00000612337 EIF4G2P78344 907 aaKnown RBP eCLIP24.55■■□□□ 1.52
SSBP1-215ENST00000612337 POLKQ9UBT6 870 aa24.55■■□□□ 1.52
SSBP1-215ENST00000612337 TOGARAM1Q9Y4F4 1720 aa24.53■■□□□ 1.52
SSBP1-215ENST00000612337 MPRIPQ6WCQ1 1025 aa24.53■■□□□ 1.52
SSBP1-215ENST00000612337 EYA1Q99502 592 aa24.53■■□□□ 1.52
SSBP1-215ENST00000612337 ITGB4P16144 1822 aa24.52■■□□□ 1.52
SSBP1-215ENST00000612337 HSPA5P11021 654 aaKnown RBP24.52■■□□□ 1.52
SSBP1-215ENST00000612337 HMGB2P26583 209 aaKnown RBP24.52■■□□□ 1.52
SSBP1-215ENST00000612337 SPG7Q9UQ90 795 aa24.52■■□□□ 1.52
SSBP1-215ENST00000612337 C5P01031 1676 aa24.52■■□□□ 1.52
SSBP1-215ENST00000612337 PALLDQ8WX93 1383 aa24.52■■□□□ 1.52
SSBP1-215ENST00000612337 NKX1-1Q15270 411 aaPredicted RBP24.51■■□□□ 1.51
SSBP1-215ENST00000612337 COL23A1Q86Y22 540 aaPredicted RBP24.5■■□□□ 1.51
SSBP1-215ENST00000612337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.5■■□□□ 1.512e-7■■□□□ 12.8
SSBP1-215ENST00000612337 SMARCC1Q92922 1105 aaPredicted RBP24.49■■□□□ 1.51
SSBP1-215ENST00000612337 TAF1LQ8IZX4 1826 aa24.49■■□□□ 1.51
SSBP1-215ENST00000612337 MSH5O43196 834 aa24.47■■□□□ 1.51
SSBP1-215ENST00000612337 TNNT2P45379 298 aaPredicted RBP24.47■■□□□ 1.51
SSBP1-215ENST00000612337 KLHL34Q8N239 644 aa24.47■■□□□ 1.51
SSBP1-215ENST00000612337 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
SSBP1-215ENST00000612337 PANK3Q9H999 370 aa24.47■■□□□ 1.51
SSBP1-215ENST00000612337 CHD4Q14839 1912 aa24.47■■□□□ 1.51
SSBP1-215ENST00000612337 EIF4A2Q14240 407 aaKnown RBP24.46■■□□□ 1.51
SSBP1-215ENST00000612337 PIGBQ92521 554 aa24.46■■□□□ 1.51
SSBP1-215ENST00000612337 PLEKHG2Q9H7P9 1386 aa24.44■■□□□ 1.5
SSBP1-215ENST00000612337 FLAD1Q8NFF5 587 aa24.44■■□□□ 1.5
SSBP1-215ENST00000612337 GPR162Q16538 588 aa24.43■■□□□ 1.5
SSBP1-215ENST00000612337 IFNL2Q8IZJ0 200 aa24.43■■□□□ 1.5
SSBP1-215ENST00000612337 C4BP0C0L5 1744 aa24.43■■□□□ 1.5
SSBP1-215ENST00000612337 PHKG2P15735 406 aa24.42■■□□□ 1.5
SSBP1-215ENST00000612337 ZNF784Q8NCA9 323 aaPredicted RBP24.41■■□□□ 1.5
SSBP1-215ENST00000612337 TMOD3Q9NYL9 352 aa24.41■■□□□ 1.5
SSBP1-215ENST00000612337 IGSF1Q8N6C5 1336 aa24.4■■□□□ 1.5
SSBP1-215ENST00000612337 MSL1Q68DK7 614 aa24.4■■□□□ 1.5
SSBP1-215ENST00000612337 NLGN2Q8NFZ4 835 aa24.4■■□□□ 1.5
SSBP1-215ENST00000612337 AK7Q96M32 723 aa24.39■■□□□ 1.49
SSBP1-215ENST00000612337 LOC102724428A0A0B4J2F2 783 aa24.38■■□□□ 1.49
SSBP1-215ENST00000612337 SIK1P57059 783 aa24.38■■□□□ 1.49
SSBP1-215ENST00000612337 UBR3Q6ZT12 1888 aa24.37■■□□□ 1.49
SSBP1-215ENST00000612337 ASAP1Q9ULH1 1129 aa24.36■■□□□ 1.49
SSBP1-215ENST00000612337 MORC1Q86VD1 984 aa24.35■■□□□ 1.49
SSBP1-215ENST00000612337 AMIGO3Q86WK7 504 aa24.35■■□□□ 1.49
SSBP1-215ENST00000612337 PELP1Q8IZL8 1130 aaKnown RBP24.35■■□□□ 1.49
SSBP1-215ENST00000612337 LINC00116Q8NCU8 138 aa24.34■■□□□ 1.49
SSBP1-215ENST00000612337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.33■■□□□ 1.49
SSBP1-215ENST00000612337 SSFA2P28290 1259 aa24.33■■□□□ 1.49
SSBP1-215ENST00000612337 KNSTRNQ9Y448 316 aa24.33■■□□□ 1.49
SSBP1-215ENST00000612337 PHF14O94880 888 aa24.32■■□□□ 1.48
SSBP1-215ENST00000612337 HSP90AB1P08238 724 aaKnown RBP24.32■■□□□ 1.48
SSBP1-215ENST00000612337 PLEKHO1Q53GL0 409 aaPredicted RBP24.32■■□□□ 1.48
SSBP1-215ENST00000612337 ATG3Q9NT62 314 aa24.32■■□□□ 1.48
SSBP1-215ENST00000612337 CD2APQ9Y5K6 639 aa24.32■■□□□ 1.48
SSBP1-215ENST00000612337 ERVV-2B6SEH9 535 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms