RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 STK32BQ9NY57 414 aa16.93■□□□□ 0.3
FAM228B-207ENST00000611917 PCDH11XQ9BZA7 1347 aa16.92■□□□□ 0.3
FAM228B-207ENST00000611917 PCDH11YQ9BZA8 1340 aa16.92■□□□□ 0.3
FAM228B-207ENST00000611917 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
FAM228B-207ENST00000611917 LRRC37A3O60309 1634 aa16.9■□□□□ 0.3
FAM228B-207ENST00000611917 MYOM1P52179 1685 aa16.9■□□□□ 0.3
FAM228B-207ENST00000611917 MTHFSP49914 203 aa16.89■□□□□ 0.29
FAM228B-207ENST00000611917 PLEKHO1Q53GL0 409 aaPredicted RBP16.89■□□□□ 0.29
FAM228B-207ENST00000611917 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
FAM228B-207ENST00000611917 IFNL2Q8IZJ0 200 aa16.89■□□□□ 0.29
FAM228B-207ENST00000611917 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
FAM228B-207ENST00000611917 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
FAM228B-207ENST00000611917 CYP27B1O15528 508 aa16.87■□□□□ 0.29
FAM228B-207ENST00000611917 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
FAM228B-207ENST00000611917 NKX1-1Q15270 411 aaPredicted RBP16.87■□□□□ 0.29
FAM228B-207ENST00000611917 AMOTQ4VCS5 1084 aa16.87■□□□□ 0.29
FAM228B-207ENST00000611917 PEAK1Q9H792 1746 aa16.87■□□□□ 0.29
FAM228B-207ENST00000611917 FAM208AQ9UK61 1670 aaKnown RBP16.86■□□□□ 0.29
FAM228B-207ENST00000611917 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
FAM228B-207ENST00000611917 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
FAM228B-207ENST00000611917 SPON1Q9HCB6 807 aa16.86■□□□□ 0.29
FAM228B-207ENST00000611917 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
FAM228B-207ENST00000611917 MEGF6O75095 1541 aa16.85■□□□□ 0.29
FAM228B-207ENST00000611917 TNS1Q9HBL0 1735 aaKnown RBP16.84■□□□□ 0.29
FAM228B-207ENST00000611917 IL13P35225 146 aa16.84■□□□□ 0.29
FAM228B-207ENST00000611917 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
FAM228B-207ENST00000611917 DIAPH1O60610 1272 aaKnown RBP16.83■□□□□ 0.28
FAM228B-207ENST00000611917 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
FAM228B-207ENST00000611917 IGSF1Q8N6C5 1336 aa16.83■□□□□ 0.28
FAM228B-207ENST00000611917 KAT6BQ8WYB5 2073 aa16.82■□□□□ 0.28
FAM228B-207ENST00000611917 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
FAM228B-207ENST00000611917 PHKG2P15735 406 aa16.82■□□□□ 0.28
FAM228B-207ENST00000611917 PPP1R1BQ9UD71 204 aaPredicted RBP16.82■□□□□ 0.28
FAM228B-207ENST00000611917 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
FAM228B-207ENST00000611917 CFAP53Q96M91 514 aa16.81■□□□□ 0.28
FAM228B-207ENST00000611917 LRRC4BQ9NT99 713 aa16.81■□□□□ 0.28
FAM228B-207ENST00000611917 TMOD3Q9NYL9 352 aa16.81■□□□□ 0.28
FAM228B-207ENST00000611917 CCNL1Q9UK58 526 aaPredicted RBP16.81■□□□□ 0.28
FAM228B-207ENST00000611917 PLEKHG2Q9H7P9 1386 aa16.8■□□□□ 0.28
FAM228B-207ENST00000611917 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
FAM228B-207ENST00000611917 WNK3Q9BYP7 1800 aa16.8■□□□□ 0.28
FAM228B-207ENST00000611917 ERVV-2B6SEH9 535 aa16.8■□□□□ 0.28
FAM228B-207ENST00000611917 ANO8Q9HCE9 1232 aaPredicted RBP16.8■□□□□ 0.28
FAM228B-207ENST00000611917 TFCP2L1Q9NZI6 479 aa16.8■□□□□ 0.28
FAM228B-207ENST00000611917 ZNF530Q6P9A1 599 aaPredicted RBP16.79■□□□□ 0.28
FAM228B-207ENST00000611917 PIGBQ92521 554 aa16.79■□□□□ 0.28
FAM228B-207ENST00000611917 DCAF5Q96JK2 942 aa16.79■□□□□ 0.28
FAM228B-207ENST00000611917 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
FAM228B-207ENST00000611917 NUDCQ9Y266 331 aa16.78■□□□□ 0.28
FAM228B-207ENST00000611917 CABP4P57796 275 aa16.77■□□□□ 0.28
FAM228B-207ENST00000611917 SLC16A10Q8TF71 515 aa16.77■□□□□ 0.28
FAM228B-207ENST00000611917 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
FAM228B-207ENST00000611917 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.27
FAM228B-207ENST00000611917 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
FAM228B-207ENST00000611917 U2SURPO15042 1029 aaKnown RBP16.76■□□□□ 0.27
FAM228B-207ENST00000611917 ZBTB7AO95365 584 aa16.76■□□□□ 0.27
FAM228B-207ENST00000611917 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
FAM228B-207ENST00000611917 AEBP1Q8IUX7 1158 aa16.76■□□□□ 0.27
FAM228B-207ENST00000611917 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
FAM228B-207ENST00000611917 MTFR1LQ9H019 292 aa16.76■□□□□ 0.27
FAM228B-207ENST00000611917 KCNQ4P56696 695 aa16.75■□□□□ 0.27
FAM228B-207ENST00000611917 FLAD1Q8NFF5 587 aa16.75■□□□□ 0.27
FAM228B-207ENST00000611917 HMOX1P09601 288 aa16.74■□□□□ 0.27
FAM228B-207ENST00000611917 AKAP4Q5JQC9 854 aa16.74■□□□□ 0.27
FAM228B-207ENST00000611917 NHSQ6T4R5 1651 aa16.74■□□□□ 0.27
FAM228B-207ENST00000611917 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
FAM228B-207ENST00000611917 MSH5O43196 834 aa16.73■□□□□ 0.27
FAM228B-207ENST00000611917 RREB1Q92766 1687 aa16.72■□□□□ 0.27
FAM228B-207ENST00000611917 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
FAM228B-207ENST00000611917 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
FAM228B-207ENST00000611917 PALLDQ8WX93 1383 aa16.72■□□□□ 0.27
FAM228B-207ENST00000611917 RGPD3A6NKT7 1758 aaPredicted RBP16.72■□□□□ 0.27
FAM228B-207ENST00000611917 RGPD4Q7Z3J3 1758 aa16.72■□□□□ 0.27
FAM228B-207ENST00000611917 LOC102724428A0A0B4J2F2 783 aa16.71■□□□□ 0.27
FAM228B-207ENST00000611917 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
FAM228B-207ENST00000611917 ATP6V1AP38606 617 aa16.71■□□□□ 0.27
FAM228B-207ENST00000611917 SIK1P57059 783 aa16.71■□□□□ 0.27
FAM228B-207ENST00000611917 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
FAM228B-207ENST00000611917 ASAP1Q9ULH1 1129 aa16.71■□□□□ 0.27
FAM228B-207ENST00000611917 KDRP35968 1356 aa16.7■□□□□ 0.26
FAM228B-207ENST00000611917 POLD1P28340 1107 aa16.7■□□□□ 0.26
FAM228B-207ENST00000611917 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
FAM228B-207ENST00000611917 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
FAM228B-207ENST00000611917 NUP188Q5SRE5 1749 aa16.7■□□□□ 0.26
FAM228B-207ENST00000611917 AK7Q96M32 723 aa16.69■□□□□ 0.26
FAM228B-207ENST00000611917 MTHFSDQ2M296 383 aaKnown RBP16.68■□□□□ 0.26
FAM228B-207ENST00000611917 BTAF1O14981 1849 aa16.68■□□□□ 0.26
FAM228B-207ENST00000611917 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
FAM228B-207ENST00000611917 PTGER2P43116 358 aa16.67■□□□□ 0.26
FAM228B-207ENST00000611917 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
FAM228B-207ENST00000611917 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
FAM228B-207ENST00000611917 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
FAM228B-207ENST00000611917 ARXQ96QS3 562 aa16.67■□□□□ 0.26
FAM228B-207ENST00000611917 FCHSD2O94868 740 aa16.66■□□□□ 0.26
FAM228B-207ENST00000611917 NEFMP07197 916 aa16.66■□□□□ 0.26
FAM228B-207ENST00000611917 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
FAM228B-207ENST00000611917 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
FAM228B-207ENST00000611917 RALBP1Q15311 655 aa16.65■□□□□ 0.26
FAM228B-207ENST00000611917 COL23A1Q86Y22 540 aaPredicted RBP16.65■□□□□ 0.26
FAM228B-207ENST00000611917 PNNQ9H307 717 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms