RNA–Protein interactions for RNA: ENST00000611899.4

PDE1B-209, Transcript of phosphodiesterase 1B, humanhuman

TSL 4

Gene PDE1B, Length 628 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-209ENST00000611899 GPR162Q16538 588 aa29.49■■■□□ 2.31
PDE1B-209ENST00000611899 RTL1A6NKG5 1358 aa29.49■■■□□ 2.31
PDE1B-209ENST00000611899 RRS1Q15050 365 aaKnown RBP29.48■■■□□ 2.31
PDE1B-209ENST00000611899 MEGF6O75095 1541 aa29.48■■■□□ 2.31
PDE1B-209ENST00000611899 NSD2O96028 1365 aa29.47■■■□□ 2.31
PDE1B-209ENST00000611899 KAT6BQ8WYB5 2073 aa29.46■■■□□ 2.31
PDE1B-209ENST00000611899 UTRNP46939 3433 aa29.46■■■□□ 2.31
PDE1B-209ENST00000611899 NBPF6Q5VWK0 638 aa29.45■■■□□ 2.31
PDE1B-209ENST00000611899 NBPF4Q96M43 638 aa29.45■■■□□ 2.31
PDE1B-209ENST00000611899 GGNBP2Q9H3C7 697 aa29.45■■■□□ 2.31
PDE1B-209ENST00000611899 CCNL1Q9UK58 526 aaPredicted RBP29.45■■■□□ 2.31
PDE1B-209ENST00000611899 SMG6Q86US8 1419 aaKnown RBP29.44■■■□□ 2.3
PDE1B-209ENST00000611899 FYB1O15117 783 aa29.43■■■□□ 2.3
PDE1B-209ENST00000611899 TMF1P82094 1093 aa29.43■■■□□ 2.3
PDE1B-209ENST00000611899 USHBP1Q8N6Y0 703 aa29.43■■■□□ 2.3
PDE1B-209ENST00000611899 RAPGEF4Q8WZA2 1011 aa29.43■■■□□ 2.3
PDE1B-209ENST00000611899 CGNL1Q0VF96 1302 aa29.43■■■□□ 2.3
PDE1B-209ENST00000611899 DOT1LQ8TEK3 1739 aa29.42■■■□□ 2.3
PDE1B-209ENST00000611899 USP47Q96K76 1375 aa29.42■■■□□ 2.3
PDE1B-209ENST00000611899 PELP1Q8IZL8 1130 aaKnown RBP29.42■■■□□ 2.3
PDE1B-209ENST00000611899 MSH5O43196 834 aa29.4■■■□□ 2.3
PDE1B-209ENST00000611899 QSER1Q2KHR3 1735 aa29.4■■■□□ 2.3
PDE1B-209ENST00000611899 TATP17735 454 aaPredicted RBP29.39■■■□□ 2.3
PDE1B-209ENST00000611899 NLGN2Q8NFZ4 835 aa29.36■■■□□ 2.29
PDE1B-209ENST00000611899 SHANK3Q9BYB0 1731 aa29.36■■■□□ 2.29
PDE1B-209ENST00000611899 RGPD2P0DJD1 1756 aa29.36■■■□□ 2.29
PDE1B-209ENST00000611899 LY75O60449 1722 aa29.35■■■□□ 2.29
PDE1B-209ENST00000611899 HSP90AB2PQ58FF8 381 aa29.35■■■□□ 2.29
PDE1B-209ENST00000611899 CDCA8Q53HL2 280 aa29.34■■■□□ 2.29
PDE1B-209ENST00000611899 COL23A1Q86Y22 540 aaPredicted RBP29.34■■■□□ 2.29
PDE1B-209ENST00000611899 PCDH11XQ9BZA7 1347 aa29.34■■■□□ 2.29
PDE1B-209ENST00000611899 PCDH11YQ9BZA8 1340 aa29.34■■■□□ 2.29
PDE1B-209ENST00000611899 INSRP06213 1382 aa29.34■■■□□ 2.29
PDE1B-209ENST00000611899 FLT4P35916 1363 aa29.32■■■□□ 2.28
PDE1B-209ENST00000611899 C1QTNF8P60827 252 aa29.32■■■□□ 2.28
PDE1B-209ENST00000611899 CHD4Q14839 1912 aa29.32■■■□□ 2.28
PDE1B-209ENST00000611899 TUBGCP6Q96RT7 1819 aa29.31■■■□□ 2.28
PDE1B-209ENST00000611899 COL24A1Q17RW2 1714 aa29.31■■■□□ 2.28
PDE1B-209ENST00000611899 SENP3-EIF4A1A0A087X0R7 540 aa29.3■■■□□ 2.28
PDE1B-209ENST00000611899 KIF24Q5T7B8 1368 aa29.29■■■□□ 2.28
PDE1B-209ENST00000611899 HMGB2P26583 209 aaKnown RBP29.29■■■□□ 2.28
PDE1B-209ENST00000611899 MSL1Q68DK7 614 aa29.29■■■□□ 2.28
PDE1B-209ENST00000611899 MPRIPQ6WCQ1 1025 aa29.28■■■□□ 2.28
PDE1B-209ENST00000611899 PALLDQ8WX93 1383 aa29.27■■■□□ 2.28
PDE1B-209ENST00000611899 GRIN3BO60391 1043 aa29.25■■■□□ 2.27
PDE1B-209ENST00000611899 FLAD1Q8NFF5 587 aa29.25■■■□□ 2.27
PDE1B-209ENST00000611899 CYP27B1O15528 508 aa29.24■■■□□ 2.27
PDE1B-209ENST00000611899 GIGYF1O75420 1035 aaPredicted RBP29.24■■■□□ 2.27
PDE1B-209ENST00000611899 EMILIN1Q9Y6C2 1016 aa29.24■■■□□ 2.27
PDE1B-209ENST00000611899 YBX3P16989 372 aaKnown RBP eCLIP29.23■■■□□ 2.27
PDE1B-209ENST00000611899 SMARCC1Q92922 1105 aaPredicted RBP29.22■■■□□ 2.27
PDE1B-209ENST00000611899 CARD14Q9BXL6 1004 aa29.22■■■□□ 2.27
PDE1B-209ENST00000611899 NSD3Q9BZ95 1437 aa29.21■■■□□ 2.27
PDE1B-209ENST00000611899 PPM1GO15355 546 aaPredicted RBP29.21■■■□□ 2.27
PDE1B-209ENST00000611899 AK7Q96M32 723 aa29.2■■■□□ 2.26
PDE1B-209ENST00000611899 KIF20BQ96Q89 1820 aa29.2■■■□□ 2.26
PDE1B-209ENST00000611899 C5P01031 1676 aa29.18■■■□□ 2.26
PDE1B-209ENST00000611899 GOLGB1Q14789 3259 aaKnown RBP29.18■■■□□ 2.26
PDE1B-209ENST00000611899 SPG7Q9UQ90 795 aa29.17■■■□□ 2.26
PDE1B-209ENST00000611899 CD2APQ9Y5K6 639 aa29.17■■■□□ 2.26
PDE1B-209ENST00000611899 PIGBQ92521 554 aa29.16■■■□□ 2.26
PDE1B-209ENST00000611899 PHF14O94880 888 aa29.14■■■□□ 2.26
PDE1B-209ENST00000611899 NKX1-1Q15270 411 aaPredicted RBP29.13■■■□□ 2.25
PDE1B-209ENST00000611899 NCAPD2Q15021 1401 aa29.12■■■□□ 2.25
PDE1B-209ENST00000611899 WASHC2AQ641Q2 1341 aa29.12■■■□□ 2.25
PDE1B-209ENST00000611899 TRIM26Q12899 539 aaPredicted RBP29.11■■■□□ 2.25
PDE1B-209ENST00000611899 AMIGO3Q86WK7 504 aa29.11■■■□□ 2.25
PDE1B-209ENST00000611899 C4BP0C0L5 1744 aa29.11■■■□□ 2.25
PDE1B-209ENST00000611899 TOGARAM1Q9Y4F4 1720 aa29.11■■■□□ 2.25
PDE1B-209ENST00000611899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.1■■■□□ 2.25
PDE1B-209ENST00000611899 EYA1Q99502 592 aa29.1■■■□□ 2.25
PDE1B-209ENST00000611899 TMOD3Q9NYL9 352 aa29.1■■■□□ 2.25
PDE1B-209ENST00000611899 PKD1L3Q7Z443 1732 aa29.09■■■□□ 2.25
PDE1B-209ENST00000611899 LOC102724428A0A0B4J2F2 783 aa29.09■■■□□ 2.25
PDE1B-209ENST00000611899 SIK1P57059 783 aa29.09■■■□□ 2.25
PDE1B-209ENST00000611899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.09■■■□□ 2.25
PDE1B-209ENST00000611899 SMIM5Q71RC9 77 aa29.08■■■□□ 2.25
PDE1B-209ENST00000611899 SSFA2P28290 1259 aa29.07■■■□□ 2.24
PDE1B-209ENST00000611899 TAF1LQ8IZX4 1826 aa29.06■■■□□ 2.24
PDE1B-209ENST00000611899 LINC00116Q8NCU8 138 aa29.06■■■□□ 2.24
PDE1B-209ENST00000611899 ATP10DQ9P241 1426 aa29.05■■■□□ 2.24
PDE1B-209ENST00000611899 IFNL2Q8IZJ0 200 aa29.05■■■□□ 2.24
PDE1B-209ENST00000611899 POLKQ9UBT6 870 aa29.05■■■□□ 2.24
PDE1B-209ENST00000611899 ASAP1Q9ULH1 1129 aa29.04■■■□□ 2.24
PDE1B-209ENST00000611899 PHKG2P15735 406 aa29.03■■■□□ 2.24
PDE1B-209ENST00000611899 POLR3GLQ9BT43 218 aa29.03■■■□□ 2.24
PDE1B-209ENST00000611899 ITGB4P16144 1822 aa29.03■■■□□ 2.24
PDE1B-209ENST00000611899 IGSF1Q8N6C5 1336 aa29.02■■■□□ 2.24
PDE1B-209ENST00000611899 GNPATO15228 680 aa29.02■■■□□ 2.24
PDE1B-209ENST00000611899 ATP6V1AP38606 617 aa29.02■■■□□ 2.24
PDE1B-209ENST00000611899 TIMELESSQ9UNS1 1208 aa29.02■■■□□ 2.24
PDE1B-209ENST00000611899 ANKRD26Q9UPS8 1709 aa29.01■■■□□ 2.23
PDE1B-209ENST00000611899 ITPK1Q13572 414 aa29.01■■■□□ 2.23
PDE1B-209ENST00000611899 TNNT2P45379 298 aaPredicted RBP29■■■□□ 2.23
PDE1B-209ENST00000611899 GPBP1L1Q9HC44 474 aaPredicted RBP29■■■□□ 2.23
PDE1B-209ENST00000611899 WWC3Q9ULE0 1092 aa29■■■□□ 2.23
PDE1B-209ENST00000611899 EIF4A2Q14240 407 aaKnown RBP28.99■■■□□ 2.23
PDE1B-209ENST00000611899 ATG3Q9NT62 314 aa28.98■■■□□ 2.23
PDE1B-209ENST00000611899 UBR3Q6ZT12 1888 aa28.97■■■□□ 2.23
PDE1B-209ENST00000611899 ZNF526Q8TF50 670 aaPredicted RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms