RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
GRIA3-205ENST00000611689 THSD7AQ9UPZ6 1657 aa20.69■□□□□ 0.9
GRIA3-205ENST00000611689 EXOC5O00471 708 aa20.68■□□□□ 0.9
GRIA3-205ENST00000611689 PRKAR2BP31323 418 aa20.68■□□□□ 0.9
GRIA3-205ENST00000611689 DDB1Q16531 1140 aa20.68■□□□□ 0.9
GRIA3-205ENST00000611689 ZCRB1Q8TBF4 217 aaKnown RBP20.68■□□□□ 0.9
GRIA3-205ENST00000611689 RGS12O14924 1447 aa20.68■□□□□ 0.9
GRIA3-205ENST00000611689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.9
GRIA3-205ENST00000611689 PLEKHG2Q9H7P9 1386 aa20.67■□□□□ 0.9
GRIA3-205ENST00000611689 PLEKHO1Q53GL0 409 aaPredicted RBP20.66■□□□□ 0.9
GRIA3-205ENST00000611689 WNK3Q9BYP7 1800 aa20.66■□□□□ 0.9
GRIA3-205ENST00000611689 AMOTQ4VCS5 1084 aa20.65■□□□□ 0.9
GRIA3-205ENST00000611689 PHACTR3Q96KR7 559 aa20.65■□□□□ 0.9
GRIA3-205ENST00000611689 PLEKHF1Q96S99 279 aa20.65■□□□□ 0.9
GRIA3-205ENST00000611689 PNNQ9H307 717 aaKnown RBP20.65■□□□□ 0.9
GRIA3-205ENST00000611689 SPG7Q9UQ90 795 aa20.65■□□□□ 0.9
GRIA3-205ENST00000611689 PARP4Q9UKK3 1724 aaKnown RBP20.64■□□□□ 0.9
GRIA3-205ENST00000611689 TNS2Q63HR2 1409 aa20.64■□□□□ 0.89
GRIA3-205ENST00000611689 PDE3BQ13370 1112 aa20.64■□□□□ 0.89
GRIA3-205ENST00000611689 MTHFSDQ2M296 383 aaKnown RBP20.62■□□□□ 0.89
GRIA3-205ENST00000611689 KRT27Q7Z3Y8 459 aa20.62■□□□□ 0.89
GRIA3-205ENST00000611689 FAM9BQ8IZU0 186 aa20.62■□□□□ 0.89
GRIA3-205ENST00000611689 MARCH10Q8NA82 808 aaPredicted RBP20.62■□□□□ 0.89
GRIA3-205ENST00000611689 DDX54Q8TDD1 881 aaKnown RBP20.62■□□□□ 0.89
GRIA3-205ENST00000611689 LRRC37A3O60309 1634 aa20.62■□□□□ 0.89
GRIA3-205ENST00000611689 CYP27B1O15528 508 aa20.61■□□□□ 0.89
GRIA3-205ENST00000611689 CCDC146Q8IYE0 955 aa20.61■□□□□ 0.89
GRIA3-205ENST00000611689 PCDH11XQ9BZA7 1347 aa20.6■□□□□ 0.89
GRIA3-205ENST00000611689 PCDH11YQ9BZA8 1340 aa20.6■□□□□ 0.89
GRIA3-205ENST00000611689 RUNDC1Q96C34 613 aa20.6■□□□□ 0.89
GRIA3-205ENST00000611689 PKD1L3Q7Z443 1732 aa20.59■□□□□ 0.89
GRIA3-205ENST00000611689 NEFMP07197 916 aa20.59■□□□□ 0.89
GRIA3-205ENST00000611689 ZNF530Q6P9A1 599 aaPredicted RBP20.59■□□□□ 0.89
GRIA3-205ENST00000611689 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.89
GRIA3-205ENST00000611689 PHKG2P15735 406 aa20.58■□□□□ 0.89
GRIA3-205ENST00000611689 IFNL2Q8IZJ0 200 aa20.58■□□□□ 0.89
GRIA3-205ENST00000611689 GAS2L2Q8NHY3 880 aa20.58■□□□□ 0.89
GRIA3-205ENST00000611689 FAM182BQ5T319 152 aa20.57■□□□□ 0.88
GRIA3-205ENST00000611689 BRWD3Q6RI45 1802 aa20.56■□□□□ 0.88
GRIA3-205ENST00000611689 AKAP4Q5JQC9 854 aa20.56■□□□□ 0.88
GRIA3-205ENST00000611689 SHANK3Q9BYB0 1731 aa20.56■□□□□ 0.88
GRIA3-205ENST00000611689 NKX1-1Q15270 411 aaPredicted RBP20.55■□□□□ 0.88
GRIA3-205ENST00000611689 C1orf141Q5JVX7 400 aa20.55■□□□□ 0.88
GRIA3-205ENST00000611689 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
GRIA3-205ENST00000611689 ILDR2Q71H61 639 aa20.53■□□□□ 0.88
GRIA3-205ENST00000611689 GNAT3A8MTJ3 354 aa20.52■□□□□ 0.88
GRIA3-205ENST00000611689 APAF1O14727 1248 aa20.52■□□□□ 0.88
GRIA3-205ENST00000611689 HSP90AB1P08238 724 aaKnown RBP20.52■□□□□ 0.88
GRIA3-205ENST00000611689 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
GRIA3-205ENST00000611689 FAM196AQ6ZSG2 479 aa20.52■□□□□ 0.88
GRIA3-205ENST00000611689 BCL9O00512 1426 aa20.52■□□□□ 0.87
GRIA3-205ENST00000611689 MPRIPQ6WCQ1 1025 aa20.51■□□□□ 0.87
GRIA3-205ENST00000611689 MAP3K5Q99683 1374 aa20.5■□□□□ 0.87
GRIA3-205ENST00000611689 RIPK4P57078 832 aa20.5■□□□□ 0.87
GRIA3-205ENST00000611689 DCAF5Q96JK2 942 aa20.5■□□□□ 0.87
GRIA3-205ENST00000611689 RRP7AQ9Y3A4 280 aaKnown RBP20.5■□□□□ 0.87
GRIA3-205ENST00000611689 HTATSF1O43719 755 aaKnown RBP20.49■□□□□ 0.87
GRIA3-205ENST00000611689 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
GRIA3-205ENST00000611689 KDM6AO15550 1401 aaPredicted RBP20.48■□□□□ 0.87
GRIA3-205ENST00000611689 RNMTO43148 476 aaKnown RBP20.48■□□□□ 0.87
GRIA3-205ENST00000611689 NEUROD2Q15784 382 aa20.48■□□□□ 0.87
GRIA3-205ENST00000611689 IL17REQ8NFR9 667 aa20.47■□□□□ 0.87
GRIA3-205ENST00000611689 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
GRIA3-205ENST00000611689 SENP3-EIF4A1A0A087X0R7 540 aa20.46■□□□□ 0.87
GRIA3-205ENST00000611689 RTF1Q92541 710 aaKnown RBP20.46■□□□□ 0.87
GRIA3-205ENST00000611689 ERVV-2B6SEH9 535 aa20.45■□□□□ 0.86
GRIA3-205ENST00000611689 KCNQ2O43526 872 aa20.45■□□□□ 0.86
GRIA3-205ENST00000611689 PRIM1P49642 420 aaKnown RBP20.45■□□□□ 0.86
GRIA3-205ENST00000611689 TRIM35Q9UPQ4 493 aa20.45■□□□□ 0.86
GRIA3-205ENST00000611689 DCTN1Q14203 1278 aa20.44■□□□□ 0.86
GRIA3-205ENST00000611689 MCM10Q7L590 875 aa20.44■□□□□ 0.86
GRIA3-205ENST00000611689 LMOD3Q0VAK6 560 aa20.43■□□□□ 0.86
GRIA3-205ENST00000611689 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
GRIA3-205ENST00000611689 CEMIPQ8WUJ3 1361 aa20.43■□□□□ 0.86
GRIA3-205ENST00000611689 TRIM37O94972 964 aa20.42■□□□□ 0.86
GRIA3-205ENST00000611689 CABP4P57796 275 aa20.42■□□□□ 0.86
GRIA3-205ENST00000611689 PTF1AQ7RTS3 328 aa20.42■□□□□ 0.86
GRIA3-205ENST00000611689 SYTL4Q96C24 671 aaPredicted RBP20.42■□□□□ 0.86
GRIA3-205ENST00000611689 BCL11BQ9C0K0 894 aaPredicted RBP20.42■□□□□ 0.86
GRIA3-205ENST00000611689 NFATC2IPQ8NCF5 419 aa20.41■□□□□ 0.86
GRIA3-205ENST00000611689 SLC52A2Q9HAB3 445 aa20.41■□□□□ 0.86
GRIA3-205ENST00000611689 ADAMTS7Q9UKP4 1686 aa20.41■□□□□ 0.86
GRIA3-205ENST00000611689 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
GRIA3-205ENST00000611689 CCDC27Q2M243 656 aa20.4■□□□□ 0.86
GRIA3-205ENST00000611689 NGEFQ8N5V2 710 aa20.4■□□□□ 0.86
GRIA3-205ENST00000611689 PIGBQ92521 554 aa20.4■□□□□ 0.86
GRIA3-205ENST00000611689 THUMPD2Q9BTF0 503 aaKnown RBP20.4■□□□□ 0.86
GRIA3-205ENST00000611689 TMOD3Q9NYL9 352 aa20.4■□□□□ 0.86
GRIA3-205ENST00000611689 SALL2Q9Y467 1007 aaPredicted RBP20.4■□□□□ 0.86
GRIA3-205ENST00000611689 TEFQ10587 303 aa20.39■□□□□ 0.85
GRIA3-205ENST00000611689 DOT1LQ8TEK3 1739 aa20.39■□□□□ 0.85
GRIA3-205ENST00000611689 DLG5Q8TDM6 1919 aa20.38■□□□□ 0.85
GRIA3-205ENST00000611689 WWC1Q8IX03 1113 aa20.38■□□□□ 0.85
GRIA3-205ENST00000611689 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
GRIA3-205ENST00000611689 MRC1P22897 1456 aa20.37■□□□□ 0.85
GRIA3-205ENST00000611689 NHSQ6T4R5 1651 aa20.37■□□□□ 0.85
GRIA3-205ENST00000611689 SBF2Q86WG5 1849 aa20.37■□□□□ 0.85
GRIA3-205ENST00000611689 TAF7Q15545 349 aaPredicted RBP20.35■□□□□ 0.85
GRIA3-205ENST00000611689 CCDC125Q86Z20 511 aa20.34■□□□□ 0.85
GRIA3-205ENST00000611689 UPF1Q92900 1129 aaKnown RBP eCLIP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms