RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 DCTN1Q14203 1278 aa15.7■□□□□ 0.1
VPS45-212ENST00000611412 FAM98CQ17RN3 349 aaKnown RBP15.69■□□□□ 0.1
VPS45-212ENST00000611412 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
VPS45-212ENST00000611412 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
VPS45-212ENST00000611412 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.69■□□□□ 0.1
VPS45-212ENST00000611412 GAS2L2Q8NHY3 880 aa15.69■□□□□ 0.1
VPS45-212ENST00000611412 THUMPD2Q9BTF0 503 aaKnown RBP15.69■□□□□ 0.1
VPS45-212ENST00000611412 QTRT2Q9H974 415 aaKnown RBP15.69■□□□□ 0.1
VPS45-212ENST00000611412 ZBED9Q6R2W3 1325 aa15.69■□□□□ 0.1
VPS45-212ENST00000611412 OVOS2A0A0G2JMS6 1433 aa15.69■□□□□ 0.1
VPS45-212ENST00000611412 DLG5Q8TDM6 1919 aa15.69■□□□□ 0.1
VPS45-212ENST00000611412 PARP4Q9UKK3 1724 aaKnown RBP15.68■□□□□ 0.1
VPS45-212ENST00000611412 AMOTQ4VCS5 1084 aa15.67■□□□□ 0.1
VPS45-212ENST00000611412 MCM10Q7L590 875 aa15.67■□□□□ 0.1
VPS45-212ENST00000611412 WWC1Q8IX03 1113 aa15.67■□□□□ 0.1
VPS45-212ENST00000611412 TRPC5Q9UL62 973 aaPredicted RBP15.67■□□□□ 0.1
VPS45-212ENST00000611412 DISP2A7MBM2 1401 aa15.67■□□□□ 0.1
VPS45-212ENST00000611412 A0A0G2JS52 829 aa15.67■□□□□ 0.1
VPS45-212ENST00000611412 ATRNO75882 1429 aa15.67■□□□□ 0.1
VPS45-212ENST00000611412 MYT1Q01538 1121 aa15.67■□□□□ 0.1
VPS45-212ENST00000611412 ZCRB1Q8TBF4 217 aaKnown RBP15.67■□□□□ 0.1
VPS45-212ENST00000611412 DDX54Q8TDD1 881 aaKnown RBP15.67■□□□□ 0.1
VPS45-212ENST00000611412 GJD4Q96KN9 370 aaPredicted RBP15.67■□□□□ 0.1
VPS45-212ENST00000611412 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
VPS45-212ENST00000611412 THRAP3Q9Y2W1 955 aaKnown RBP15.66■□□□□ 0.1
VPS45-212ENST00000611412 WNK3Q9BYP7 1800 aa15.66■□□□□ 0.1
VPS45-212ENST00000611412 GLI3P10071 1580 aa15.66■□□□□ 0.1
VPS45-212ENST00000611412 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
VPS45-212ENST00000611412 GNAT3A8MTJ3 354 aa15.65■□□□□ 0.1
VPS45-212ENST00000611412 CYP27B1O15528 508 aa15.65■□□□□ 0.1
VPS45-212ENST00000611412 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
VPS45-212ENST00000611412 MPRIPQ6WCQ1 1025 aa15.65■□□□□ 0.1
VPS45-212ENST00000611412 PKD1L3Q7Z443 1732 aa15.65■□□□□ 0.1
VPS45-212ENST00000611412 MAP3K5Q99683 1374 aa15.65■□□□□ 0.1
VPS45-212ENST00000611412 ZNF521Q96K83 1311 aa15.65■□□□□ 0.1
VPS45-212ENST00000611412 RTF1Q92541 710 aaKnown RBP15.64■□□□□ 0.09
VPS45-212ENST00000611412 PHKG2P15735 406 aa15.64■□□□□ 0.09
VPS45-212ENST00000611412 AKAP4Q5JQC9 854 aa15.64■□□□□ 0.09
VPS45-212ENST00000611412 BARGINQ6ZT62 677 aa15.64■□□□□ 0.09
VPS45-212ENST00000611412 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
VPS45-212ENST00000611412 LGR6Q9HBX8 967 aa15.64■□□□□ 0.09
VPS45-212ENST00000611412 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
VPS45-212ENST00000611412 EXOC5O00471 708 aa15.63■□□□□ 0.09
VPS45-212ENST00000611412 CCDC27Q2M243 656 aa15.63■□□□□ 0.09
VPS45-212ENST00000611412 ZNF772Q68DY9 489 aaPredicted RBP15.63■□□□□ 0.09
VPS45-212ENST00000611412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.092e-6■■■■□ 20.8
VPS45-212ENST00000611412 SHANK3Q9BYB0 1731 aa15.63■□□□□ 0.09
VPS45-212ENST00000611412 DDB1Q16531 1140 aa15.63■□□□□ 0.09
VPS45-212ENST00000611412 IFNL2Q8IZJ0 200 aa15.63■□□□□ 0.09
VPS45-212ENST00000611412 IL17REQ8NFR9 667 aa15.63■□□□□ 0.09
VPS45-212ENST00000611412 RGS17Q9UGC6 210 aaPredicted RBP15.63■□□□□ 0.09
VPS45-212ENST00000611412 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
VPS45-212ENST00000611412 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
VPS45-212ENST00000611412 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
VPS45-212ENST00000611412 LMOD3Q0VAK6 560 aa15.62■□□□□ 0.09
VPS45-212ENST00000611412 NGEFQ8N5V2 710 aa15.61■□□□□ 0.09
VPS45-212ENST00000611412 LRRC37A3O60309 1634 aa15.61■□□□□ 0.09
VPS45-212ENST00000611412 GOLGA2Q08379 1002 aa15.61■□□□□ 0.09
VPS45-212ENST00000611412 CDCA7Q9BWT1 371 aaPredicted RBP15.61■□□□□ 0.09
VPS45-212ENST00000611412 TNS2Q63HR2 1409 aa15.6■□□□□ 0.09
VPS45-212ENST00000611412 RNMTO43148 476 aaKnown RBP15.59■□□□□ 0.09
VPS45-212ENST00000611412 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
VPS45-212ENST00000611412 POTEAQ6S8J7 498 aa15.59■□□□□ 0.09
VPS45-212ENST00000611412 WDR63Q8IWG1 891 aa15.59■□□□□ 0.09
VPS45-212ENST00000611412 KDM6AO15550 1401 aaPredicted RBP15.59■□□□□ 0.09
VPS45-212ENST00000611412 HTATSF1O43719 755 aaKnown RBP15.58■□□□□ 0.09
VPS45-212ENST00000611412 SEPT12Q8IYM1 358 aa15.58■□□□□ 0.09
VPS45-212ENST00000611412 MIS18AQ9NYP9 233 aa15.58■□□□□ 0.09
VPS45-212ENST00000611412 PLEKHG2Q9H7P9 1386 aa15.58■□□□□ 0.08
VPS45-212ENST00000611412 FAM182BQ5T319 152 aa15.58■□□□□ 0.08
VPS45-212ENST00000611412 MARCH10Q8NA82 808 aaPredicted RBP15.58■□□□□ 0.08
VPS45-212ENST00000611412 TSR2Q969E8 191 aaKnown RBP15.58■□□□□ 0.08
VPS45-212ENST00000611412 THSD7AQ9UPZ6 1657 aa15.58■□□□□ 0.08
VPS45-212ENST00000611412 SLFN5Q08AF3 891 aa15.57■□□□□ 0.08
VPS45-212ENST00000611412 VIRMAQ69YN4 1812 aaKnown RBP15.57■□□□□ 0.08
VPS45-212ENST00000611412 RBM6P78332 1123 aaKnown RBP15.56■□□□□ 0.08
VPS45-212ENST00000611412 PDE3BQ13370 1112 aa15.56■□□□□ 0.08
VPS45-212ENST00000611412 DCAF5Q96JK2 942 aa15.56■□□□□ 0.08
VPS45-212ENST00000611412 CEMIPQ8WUJ3 1361 aa15.55■□□□□ 0.08
VPS45-212ENST00000611412 ONECUT3O60422 494 aaPredicted RBP15.55■□□□□ 0.08
VPS45-212ENST00000611412 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
VPS45-212ENST00000611412 RXRBP28702 533 aa15.55■□□□□ 0.08
VPS45-212ENST00000611412 TEFQ10587 303 aa15.55■□□□□ 0.08
VPS45-212ENST00000611412 E9PSI1 815 aa15.55■□□□□ 0.08
VPS45-212ENST00000611412 SCN11AQ9UI33 1791 aa15.54■□□□□ 0.08
VPS45-212ENST00000611412 CALD1Q05682 793 aaKnown RBP15.54■□□□□ 0.08
VPS45-212ENST00000611412 NKX1-1Q15270 411 aaPredicted RBP15.54■□□□□ 0.08
VPS45-212ENST00000611412 DUSP27Q5VZP5 1158 aa15.54■□□□□ 0.08
VPS45-212ENST00000611412 NFATC2IPQ8NCF5 419 aa15.54■□□□□ 0.08
VPS45-212ENST00000611412 ACSBG1Q96GR2 724 aa15.54■□□□□ 0.08
VPS45-212ENST00000611412 MBIPQ9NS73 344 aa15.53■□□□□ 0.08
VPS45-212ENST00000611412 IFT57Q9NWB7 429 aa15.53■□□□□ 0.08
VPS45-212ENST00000611412 IL16Q14005 1332 aa15.53■□□□□ 0.08
VPS45-212ENST00000611412 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
VPS45-212ENST00000611412 TOGARAM1Q9Y4F4 1720 aa15.53■□□□□ 0.08
VPS45-212ENST00000611412 ADAMTS7Q9UKP4 1686 aa15.53■□□□□ 0.08
VPS45-212ENST00000611412 CABP4P57796 275 aa15.53■□□□□ 0.08
VPS45-212ENST00000611412 GNAI1P63096 354 aa15.53■□□□□ 0.08
VPS45-212ENST00000611412 TAF7Q15545 349 aaPredicted RBP15.53■□□□□ 0.08
VPS45-212ENST00000611412 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms