RNA–Protein interactions for RNA: ENST00000609401.5

LINC01278-205, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 2 BASIC

Gene LINC01278, Length 2,886 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-205ENST00000609401 SDSP20132 328 aa11.87□□□□□ -0.51
LINC01278-205ENST00000609401 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
LINC01278-205ENST00000609401 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
LINC01278-205ENST00000609401 DCTPP1Q9H773 170 aa11.87□□□□□ -0.51
LINC01278-205ENST00000609401 PYCARDQ9ULZ3 195 aa11.87□□□□□ -0.51
LINC01278-205ENST00000609401 ABCC4O15439 1325 aa11.86□□□□□ -0.51
LINC01278-205ENST00000609401 GOLGA6L6A8MZA4 724 aa11.86□□□□□ -0.51
LINC01278-205ENST00000609401 USP48Q86UV5 1035 aa11.86□□□□□ -0.51
LINC01278-205ENST00000609401 ERC2O15083 957 aa11.86□□□□□ -0.51
LINC01278-205ENST00000609401 NEK4P51957 841 aa11.86□□□□□ -0.51
LINC01278-205ENST00000609401 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
LINC01278-205ENST00000609401 KCNF1Q9H3M0 494 aa11.86□□□□□ -0.51
LINC01278-205ENST00000609401 DDX41Q9UJV9 622 aaKnown RBP11.86□□□□□ -0.51
LINC01278-205ENST00000609401 MX1P20591 662 aa11.85□□□□□ -0.51
LINC01278-205ENST00000609401 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
LINC01278-205ENST00000609401 KCNJ4P48050 445 aa11.85□□□□□ -0.51
LINC01278-205ENST00000609401 GDPD2Q9HCC8 539 aa11.85□□□□□ -0.51
LINC01278-205ENST00000609401 MORC2Q9Y6X9 1032 aaPredicted RBP11.85□□□□□ -0.51
LINC01278-205ENST00000609401 ZC3H13Q5T200 1668 aaKnown RBP11.85□□□□□ -0.51
LINC01278-205ENST00000609401 C16orf71Q8IYS4 520 aaPredicted RBP11.85□□□□□ -0.51
LINC01278-205ENST00000609401 TMEM87AQ8NBN3 555 aa11.85□□□□□ -0.51
LINC01278-205ENST00000609401 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
LINC01278-205ENST00000609401 SLC20A2Q08357 652 aa11.84□□□□□ -0.51
LINC01278-205ENST00000609401 WDR33Q9C0J8 1336 aaKnown RBP11.84□□□□□ -0.51
LINC01278-205ENST00000609401 SMTNL1A8MU46 457 aa11.84□□□□□ -0.51
LINC01278-205ENST00000609401 SMARCA5O60264 1052 aaPredicted RBP11.84□□□□□ -0.51
LINC01278-205ENST00000609401 TIGD1Q96MW7 591 aa11.84□□□□□ -0.51
LINC01278-205ENST00000609401 TET3O43151 1660 aa11.84□□□□□ -0.51
LINC01278-205ENST00000609401 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
LINC01278-205ENST00000609401 SETBP1Q9Y6X0 1596 aa11.83□□□□□ -0.52
LINC01278-205ENST00000609401 VAMP4O75379 141 aa11.83□□□□□ -0.52
LINC01278-205ENST00000609401 TERF2Q15554 542 aa11.83□□□□□ -0.52
LINC01278-205ENST00000609401 QRICH2Q9H0J4 1663 aa11.83□□□□□ -0.52
LINC01278-205ENST00000609401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC01278-205ENST00000609401 DNAJC2Q99543 621 aaKnown RBP11.83□□□□□ -0.52
LINC01278-205ENST00000609401 KIF24Q5T7B8 1368 aa11.83□□□□□ -0.52
LINC01278-205ENST00000609401 FOXD4L6Q3SYB3 417 aaPredicted RBP11.82□□□□□ -0.52
LINC01278-205ENST00000609401 FOXD4L3Q6VB84 417 aaPredicted RBP11.82□□□□□ -0.52
LINC01278-205ENST00000609401 API5Q9BZZ5 524 aaKnown RBP11.82□□□□□ -0.52
LINC01278-205ENST00000609401 OTUD7AQ8TE49 926 aaPredicted RBP11.82□□□□□ -0.52
LINC01278-205ENST00000609401 NRXN1Q9ULB1 1477 aa11.82□□□□□ -0.52
LINC01278-205ENST00000609401 TAF7LQ5H9L4 462 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 KRT222Q8N1A0 295 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 KIF18AQ8NI77 898 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 TRAK1Q9UPV9 953 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 IFT172Q9UG01 1749 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 MCCP23508 829 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 UBE2HP62256 183 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 SPC24Q8NBT2 197 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 FUCA2Q9BTY2 467 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 CALCOCO1Q9P1Z2 691 aa11.81□□□□□ -0.52
LINC01278-205ENST00000609401 PUS7Q96PZ0 661 aaKnown RBP11.81□□□□□ -0.52
LINC01278-205ENST00000609401 RTL1A6NKG5 1358 aa11.8□□□□□ -0.52
LINC01278-205ENST00000609401 AP5Z1O43299 807 aa11.8□□□□□ -0.52
LINC01278-205ENST00000609401 FAM193AP78312 1265 aa11.8□□□□□ -0.52
LINC01278-205ENST00000609401 PAXBP1Q9Y5B6 917 aa11.8□□□□□ -0.52
LINC01278-205ENST00000609401 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
LINC01278-205ENST00000609401 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
LINC01278-205ENST00000609401 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
LINC01278-205ENST00000609401 ANAPC15P60006 121 aa11.79□□□□□ -0.52
LINC01278-205ENST00000609401 KIF1BO60333 1816 aa11.79□□□□□ -0.52
LINC01278-205ENST00000609401 DEPDC5O75140 1603 aa11.79□□□□□ -0.52
LINC01278-205ENST00000609401 NOL8Q76FK4 1167 aaKnown RBP11.79□□□□□ -0.52
LINC01278-205ENST00000609401 CREBRFQ8IUR6 639 aa11.79□□□□□ -0.52
LINC01278-205ENST00000609401 RPAP2Q8IXW5 612 aaPredicted RBP11.79□□□□□ -0.52
LINC01278-205ENST00000609401 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
LINC01278-205ENST00000609401 SRCIN1Q9C0H9 1055 aa11.79□□□□□ -0.52
LINC01278-205ENST00000609401 RGS12O14924 1447 aa11.78□□□□□ -0.52
LINC01278-205ENST00000609401 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
LINC01278-205ENST00000609401 DIAPH1O60610 1272 aaKnown RBP11.78□□□□□ -0.52
LINC01278-205ENST00000609401 FBLN2P98095 1184 aa11.78□□□□□ -0.52
LINC01278-205ENST00000609401 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
LINC01278-205ENST00000609401 CNPY2Q9Y2B0 182 aa11.78□□□□□ -0.52
LINC01278-205ENST00000609401 TNNT1P13805 278 aa11.78□□□□□ -0.52
LINC01278-205ENST00000609401 PTGS1P23219 599 aa11.78□□□□□ -0.52
LINC01278-205ENST00000609401 TSPYL6Q8N831 410 aa11.78□□□□□ -0.52
LINC01278-205ENST00000609401 TULP2O00295 520 aa11.77□□□□□ -0.52
LINC01278-205ENST00000609401 GIMAP6Q6P9H5 292 aa11.77□□□□□ -0.52
LINC01278-205ENST00000609401 ZNF397Q8NF99 534 aaPredicted RBP11.77□□□□□ -0.52
LINC01278-205ENST00000609401 C16orf45Q96MC5 204 aaPredicted RBP11.77□□□□□ -0.52
LINC01278-205ENST00000609401 ATAD2Q6PL18 1390 aa11.77□□□□□ -0.52
LINC01278-205ENST00000609401 TSPYL1Q9H0U9 437 aa11.77□□□□□ -0.53
LINC01278-205ENST00000609401 IFT57Q9NWB7 429 aa11.77□□□□□ -0.53
LINC01278-205ENST00000609401 EVC2Q86UK5 1308 aa11.77□□□□□ -0.53
LINC01278-205ENST00000609401 ATP10DQ9P241 1426 aa11.77□□□□□ -0.53
LINC01278-205ENST00000609401 UGGT1Q9NYU2 1555 aa11.77□□□□□ -0.53
LINC01278-205ENST00000609401 FCHSD2O94868 740 aa11.77□□□□□ -0.53
LINC01278-205ENST00000609401 GNAI1P63096 354 aa11.77□□□□□ -0.53
LINC01278-205ENST00000609401 TCHHQ07283 1943 aa11.76□□□□□ -0.53
LINC01278-205ENST00000609401 CCDC192P0DO97 292 aa11.76□□□□□ -0.53
LINC01278-205ENST00000609401 NAA30Q147X3 362 aaPredicted RBP11.76□□□□□ -0.53
LINC01278-205ENST00000609401 TWISTNBQ3B726 338 aaPredicted RBP11.76□□□□□ -0.53
LINC01278-205ENST00000609401 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
LINC01278-205ENST00000609401 OSBPL3Q9H4L5 887 aa11.76□□□□□ -0.53
LINC01278-205ENST00000609401 FAM53CQ9NYF3 392 aa11.76□□□□□ -0.53
LINC01278-205ENST00000609401 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
LINC01278-205ENST00000609401 PLCH2O75038 1416 aa11.75□□□□□ -0.53
LINC01278-205ENST00000609401 ELL2O00472 640 aaPredicted RBP11.75□□□□□ -0.53
LINC01278-205ENST00000609401 ZSCAN22P10073 491 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms