RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
LINC01396-201ENST00000609099 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
LINC01396-201ENST00000609099 C16orf71Q8IYS4 520 aaPredicted RBP12.2□□□□□ -0.46
LINC01396-201ENST00000609099 USP54Q70EL1 1684 aa12.19□□□□□ -0.46
LINC01396-201ENST00000609099 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
LINC01396-201ENST00000609099 TNRC18O15417 2968 aaPredicted RBP12.19□□□□□ -0.46
LINC01396-201ENST00000609099 PPIP5K1Q6PFW1 1433 aa12.19□□□□□ -0.46
LINC01396-201ENST00000609099 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
LINC01396-201ENST00000609099 MSL1Q68DK7 614 aa12.18□□□□□ -0.46
LINC01396-201ENST00000609099 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
LINC01396-201ENST00000609099 CARD10Q9BWT7 1032 aa12.18□□□□□ -0.46
LINC01396-201ENST00000609099 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
LINC01396-201ENST00000609099 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
LINC01396-201ENST00000609099 EXOC5O00471 708 aa12.17□□□□□ -0.46
LINC01396-201ENST00000609099 COL23A1Q86Y22 540 aaPredicted RBP12.17□□□□□ -0.46
LINC01396-201ENST00000609099 TFCP2L1Q9NZI6 479 aa12.17□□□□□ -0.46
LINC01396-201ENST00000609099 KAT6BQ8WYB5 2073 aa12.16□□□□□ -0.46
LINC01396-201ENST00000609099 ARHGEF25Q86VW2 580 aa12.16□□□□□ -0.46
LINC01396-201ENST00000609099 RBM46Q8TBY0 533 aaKnown RBP12.16□□□□□ -0.46
LINC01396-201ENST00000609099 NMRK2Q9NPI5 230 aa12.16□□□□□ -0.46
LINC01396-201ENST00000609099 HSPA1AP0DMV8 641 aaKnown RBP12.15□□□□□ -0.46
LINC01396-201ENST00000609099 HSPA1BP0DMV9 641 aaKnown RBP12.15□□□□□ -0.46
LINC01396-201ENST00000609099 FSTL1Q12841 308 aa12.15□□□□□ -0.46
LINC01396-201ENST00000609099 CD2APQ9Y5K6 639 aa12.15□□□□□ -0.46
LINC01396-201ENST00000609099 PITPNM1O00562 1244 aa12.13□□□□□ -0.47
LINC01396-201ENST00000609099 NLRP13Q86W25 1043 aa12.13□□□□□ -0.47
LINC01396-201ENST00000609099 MPHOSPH9Q99550 1183 aa12.13□□□□□ -0.47
LINC01396-201ENST00000609099 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
LINC01396-201ENST00000609099 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
LINC01396-201ENST00000609099 ERBB3P21860 1342 aa12.12□□□□□ -0.47
LINC01396-201ENST00000609099 ZBTB22O15209 634 aa12.12□□□□□ -0.47
LINC01396-201ENST00000609099 SMIM5Q71RC9 77 aa12.12□□□□□ -0.47
LINC01396-201ENST00000609099 C5P01031 1676 aa12.12□□□□□ -0.47
LINC01396-201ENST00000609099 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
LINC01396-201ENST00000609099 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
LINC01396-201ENST00000609099 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
LINC01396-201ENST00000609099 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
LINC01396-201ENST00000609099 CCDC7Q96M83 1385 aa12.1□□□□□ -0.47
LINC01396-201ENST00000609099 KIF13BQ9NQT8 1826 aa12.1□□□□□ -0.47
LINC01396-201ENST00000609099 FXR2P51116 673 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC01396-201ENST00000609099 N4BP2Q86UW6 1770 aaPredicted RBP12.1□□□□□ -0.47
LINC01396-201ENST00000609099 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
LINC01396-201ENST00000609099 PKD1L3Q7Z443 1732 aa12.09□□□□□ -0.47
LINC01396-201ENST00000609099 HAX1O00165 279 aa12.09□□□□□ -0.47
LINC01396-201ENST00000609099 NLRP6P59044 892 aa12.09□□□□□ -0.47
LINC01396-201ENST00000609099 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.47
LINC01396-201ENST00000609099 UBR3Q6ZT12 1888 aa12.08□□□□□ -0.48
LINC01396-201ENST00000609099 LTN1O94822 1766 aa12.07□□□□□ -0.48
LINC01396-201ENST00000609099 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
LINC01396-201ENST00000609099 MLLT1Q03111 559 aaPredicted RBP12.06□□□□□ -0.48
LINC01396-201ENST00000609099 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
LINC01396-201ENST00000609099 SOX12O15370 315 aa12.05□□□□□ -0.48
LINC01396-201ENST00000609099 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
LINC01396-201ENST00000609099 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
LINC01396-201ENST00000609099 C4BP0C0L5 1744 aa12.04□□□□□ -0.48
LINC01396-201ENST00000609099 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
LINC01396-201ENST00000609099 ANKRD36BQ8N2N9 1353 aa12.04□□□□□ -0.48
LINC01396-201ENST00000609099 HMGB2P26583 209 aaKnown RBP12.03□□□□□ -0.48
LINC01396-201ENST00000609099 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
LINC01396-201ENST00000609099 PRDM10Q9NQV6 1147 aa12.03□□□□□ -0.48
LINC01396-201ENST00000609099 CABP1Q9NZU7 370 aa12.03□□□□□ -0.48
LINC01396-201ENST00000609099 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.48
LINC01396-201ENST00000609099 IL2RBP14784 551 aa12.02□□□□□ -0.49
LINC01396-201ENST00000609099 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
LINC01396-201ENST00000609099 TTC21BQ7Z4L5 1316 aa12.02□□□□□ -0.49
LINC01396-201ENST00000609099 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
LINC01396-201ENST00000609099 KIAA1210Q9ULL0 1709 aa12.02□□□□□ -0.49
LINC01396-201ENST00000609099 C10orf71Q711Q0 1435 aa12.02□□□□□ -0.49
LINC01396-201ENST00000609099 MEGF6O75095 1541 aa12.01□□□□□ -0.49
LINC01396-201ENST00000609099 MON2Q7Z3U7 1717 aa12.01□□□□□ -0.49
LINC01396-201ENST00000609099 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
LINC01396-201ENST00000609099 TNRC6CQ9HCJ0 1690 aaKnown RBP12□□□□□ -0.49
LINC01396-201ENST00000609099 SBF1O95248 1867 aa12□□□□□ -0.49
LINC01396-201ENST00000609099 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
LINC01396-201ENST00000609099 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
LINC01396-201ENST00000609099 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
LINC01396-201ENST00000609099 AIDAQ96BJ3 306 aa11.99□□□□□ -0.49
LINC01396-201ENST00000609099 ARFGEF1Q9Y6D6 1849 aa11.99□□□□□ -0.49
LINC01396-201ENST00000609099 ARHGAP27Q6ZUM4 889 aa11.98□□□□□ -0.49
LINC01396-201ENST00000609099 DCAF11Q8TEB1 546 aa11.98□□□□□ -0.49
LINC01396-201ENST00000609099 NLRP2Q9NX02 1062 aa11.98□□□□□ -0.49
LINC01396-201ENST00000609099 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
LINC01396-201ENST00000609099 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
LINC01396-201ENST00000609099 RRAGCQ9HB90 399 aa11.97□□□□□ -0.49
LINC01396-201ENST00000609099 CTCFP49711 727 aaPredicted RBP11.96□□□□□ -0.49
LINC01396-201ENST00000609099 ANKRD24Q8TF21 1146 aa11.96□□□□□ -0.49
LINC01396-201ENST00000609099 ABHD8Q96I13 439 aa11.96□□□□□ -0.49
LINC01396-201ENST00000609099 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
LINC01396-201ENST00000609099 FOXN1O15353 648 aa11.95□□□□□ -0.5
LINC01396-201ENST00000609099 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
LINC01396-201ENST00000609099 RGS19P49795 217 aa11.95□□□□□ -0.5
LINC01396-201ENST00000609099 SRPK2P78362 688 aaKnown RBP11.95□□□□□ -0.5
LINC01396-201ENST00000609099 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
LINC01396-201ENST00000609099 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
LINC01396-201ENST00000609099 ITGB4P16144 1822 aa11.95□□□□□ -0.5
LINC01396-201ENST00000609099 USP31Q70CQ4 1352 aa11.94□□□□□ -0.5
LINC01396-201ENST00000609099 PLEKHG2Q9H7P9 1386 aa11.94□□□□□ -0.5
LINC01396-201ENST00000609099 KCNA3P22001 575 aa11.94□□□□□ -0.5
LINC01396-201ENST00000609099 C9orf131Q5VYM1 1079 aa11.94□□□□□ -0.5
LINC01396-201ENST00000609099 BCS1LQ9Y276 419 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms