RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 ECE1P42892 770 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 CDC5LQ99459 802 aaKnown RBP4.56□□□□□ -1.68
LINC01278-202ENST00000608623 MMP10P09238 476 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 KCNQ4P56696 695 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 WASHC4Q2M389 1173 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 DPP8Q6V1X1 898 aaPredicted RBP4.56□□□□□ -1.68
LINC01278-202ENST00000608623 CCDC24Q8N4L8 307 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 PRM3Q9NNZ6 103 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 TTC21AQ8NDW8 1320 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.56□□□□□ -1.68
LINC01278-202ENST00000608623 GNAT3A8MTJ3 354 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 HMMRO75330 724 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 UPF1Q92900 1129 aaKnown RBP eCLIP4.56□□□□□ -1.68
LINC01278-202ENST00000608623 LRRFIP2Q9Y608 721 aaKnown RBP4.56□□□□□ -1.68
LINC01278-202ENST00000608623 PRXQ9BXM0 1461 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 KIAA0556O60303 1618 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 PRKAR2BP31323 418 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 VPS72Q15906 364 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 DAPK1P53355 1430 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 KIAA1107Q9UPP5 1409 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 SHANK2Q9UPX8 1470 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 MAGI3Q5TCQ9 1506 aa4.56□□□□□ -1.68
LINC01278-202ENST00000608623 KIAA1211Q6ZU35 1233 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 ILDR2Q71H61 639 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 MTFR1LQ9H019 292 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 ABCF2Q9UG63 623 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 NLRP1Q9C000 1473 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 TTLL6Q8N841 843 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 SMCR8Q8TEV9 937 aaPredicted RBP4.55□□□□□ -1.68
LINC01278-202ENST00000608623 RAI14Q9P0K7 980 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 THRAP3Q9Y2W1 955 aaKnown RBP4.55□□□□□ -1.68
LINC01278-202ENST00000608623 TTC21BQ7Z4L5 1316 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 NUP153P49790 1475 aaKnown RBP4.55□□□□□ -1.68
LINC01278-202ENST00000608623 LRRC9Q6ZRR7 1453 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 ERCC6L2Q5T890 1561 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 CFAP74Q9C0B2 1584 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 KIAA0232Q92628 1395 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 MKRN3Q13064 507 aaKnown RBP4.55□□□□□ -1.68
LINC01278-202ENST00000608623 CCDC30Q5VVM6 783 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 ATF7IPQ6VMQ6 1270 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 DZIP1Q86YF9 867 aaKnown RBP4.55□□□□□ -1.68
LINC01278-202ENST00000608623 ITPRIPQ8IWB1 547 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 SLF2Q8IX21 1173 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 R3HCC1Q9Y3T6 440 aaKnown RBP4.55□□□□□ -1.68
LINC01278-202ENST00000608623 UGGT2Q9NYU1 1516 aa4.55□□□□□ -1.68
LINC01278-202ENST00000608623 TAOK3Q9H2K8 898 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 C14orf93Q9H972 538 aaKnown RBP4.54□□□□□ -1.68
LINC01278-202ENST00000608623 MKRN1Q9UHC7 482 aaKnown RBP4.54□□□□□ -1.68
LINC01278-202ENST00000608623 CSADQ9Y600 493 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 IVNS1ABPQ9Y6Y0 642 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 WDR97A6NE52 1622 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 PPP1R12BO60237 982 aaPredicted RBP4.54□□□□□ -1.68
LINC01278-202ENST00000608623 PLCD3Q8N3E9 789 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 SLC16A10Q8TF71 515 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 SPINK5Q9NQ38 1064 aaPredicted RBP4.54□□□□□ -1.68
LINC01278-202ENST00000608623 PTPRTO14522 1441 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 E9PSI1 815 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 TNIP1Q15025 636 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 SPRYD3Q8NCJ5 442 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 FHDC1Q9C0D6 1143 aaPredicted RBP4.54□□□□□ -1.68
LINC01278-202ENST00000608623 NOD1Q9Y239 953 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 PBRM1Q86U86 1689 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 HRCP23327 699 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 SLC39A6Q13433 755 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 RASSF8Q8NHQ8 419 aa4.54□□□□□ -1.68
LINC01278-202ENST00000608623 RNF216Q9NWF9 866 aaPredicted RBP4.54□□□□□ -1.68
LINC01278-202ENST00000608623 PCF11O94913 1555 aaKnown RBP4.54□□□□□ -1.68
LINC01278-202ENST00000608623 SLC3A2P08195 630 aaKnown RBP4.53□□□□□ -1.68
LINC01278-202ENST00000608623 IFIT1P09914 478 aaKnown RBP4.53□□□□□ -1.68
LINC01278-202ENST00000608623 AKAP17AQ02040 695 aaKnown RBP4.53□□□□□ -1.68
LINC01278-202ENST00000608623 SLC15A2Q16348 729 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 ANKRD18AQ8IVF6 992 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 WWC1Q8IX03 1113 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 CABP5Q9NP86 173 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 A2ML1A8K2U0 1454 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 CNGA1P29973 690 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 GNAI1P63096 354 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 ARMC9Q7Z3E5 817 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 HOOK2Q96ED9 719 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 UTP14AQ9BVJ6 771 aaKnown RBP4.53□□□□□ -1.68
LINC01278-202ENST00000608623 PICK1Q9NRD5 415 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 LRP2BPQ9P2M1 347 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 TRPM2O94759 1503 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 TRIM6-TRIM34B2RNG4 842 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 IFIT2P09913 472 aaKnown RBP4.53□□□□□ -1.68
LINC01278-202ENST00000608623 CCDC152Q4G0S7 254 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 CCDC93Q567U6 631 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 SYNE3Q6ZMZ3 975 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 DPF3Q92784 378 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 SCLT1Q96NL6 688 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 SNRPA1P09661 255 aaKnown RBP4.53□□□□□ -1.68
LINC01278-202ENST00000608623 METTL24Q5JXM2 366 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 NFATC2IPQ8NCF5 419 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 DCAF5Q96JK2 942 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 EMILIN1Q9Y6C2 1016 aa4.53□□□□□ -1.68
LINC01278-202ENST00000608623 PLS1Q14651 629 aa4.52□□□□□ -1.69
LINC01278-202ENST00000608623 SLC27A3Q5K4L6 730 aa4.52□□□□□ -1.69
LINC01278-202ENST00000608623 MPNDQ8N594 471 aa4.52□□□□□ -1.69
LINC01278-202ENST00000608623 PLEKHG1Q9ULL1 1385 aa4.52□□□□□ -1.69
LINC01278-202ENST00000608623 ATP7AQ04656 1500 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms