RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 MYOM1P52179 1685 aa18.66■□□□□ 0.58
POLR2J3-219ENST00000608621 KCNQ4P56696 695 aa18.66■□□□□ 0.58
POLR2J3-219ENST00000608621 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
POLR2J3-219ENST00000608621 RTL1A6NKG5 1358 aa18.66■□□□□ 0.58
POLR2J3-219ENST00000608621 PAPPAQ13219 1627 aa18.65■□□□□ 0.58
POLR2J3-219ENST00000608621 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
POLR2J3-219ENST00000608621 CARD14Q9BXL6 1004 aa18.65■□□□□ 0.58
POLR2J3-219ENST00000608621 MEGF6O75095 1541 aa18.64■□□□□ 0.58
POLR2J3-219ENST00000608621 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.57
POLR2J3-219ENST00000608621 ARXQ96QS3 562 aa18.64■□□□□ 0.57
POLR2J3-219ENST00000608621 TATP17735 454 aaPredicted RBP18.63■□□□□ 0.57
POLR2J3-219ENST00000608621 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
POLR2J3-219ENST00000608621 CGNL1Q0VF96 1302 aa18.62■□□□□ 0.57
POLR2J3-219ENST00000608621 INSRP06213 1382 aa18.62■□□□□ 0.57
POLR2J3-219ENST00000608621 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
POLR2J3-219ENST00000608621 NSD2O96028 1365 aa18.61■□□□□ 0.57
POLR2J3-219ENST00000608621 SLC16A10Q8TF71 515 aa18.61■□□□□ 0.57
POLR2J3-219ENST00000608621 TFCP2L1Q9NZI6 479 aa18.61■□□□□ 0.57
POLR2J3-219ENST00000608621 SHANK3Q9BYB0 1731 aa18.6■□□□□ 0.57
POLR2J3-219ENST00000608621 PNPLA7Q6ZV29 1317 aa18.6■□□□□ 0.57
POLR2J3-219ENST00000608621 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
POLR2J3-219ENST00000608621 EMILIN1Q9Y6C2 1016 aa18.6■□□□□ 0.57
POLR2J3-219ENST00000608621 DOT1LQ8TEK3 1739 aa18.6■□□□□ 0.57
POLR2J3-219ENST00000608621 FLT4P35916 1363 aa18.59■□□□□ 0.57
POLR2J3-219ENST00000608621 CCNL1Q9UK58 526 aaPredicted RBP18.59■□□□□ 0.57
POLR2J3-219ENST00000608621 KIF20BQ96Q89 1820 aa18.58■□□□□ 0.57
POLR2J3-219ENST00000608621 KIF24Q5T7B8 1368 aa18.58■□□□□ 0.57
POLR2J3-219ENST00000608621 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
POLR2J3-219ENST00000608621 PPM1GO15355 546 aaPredicted RBP18.57■□□□□ 0.56
POLR2J3-219ENST00000608621 POLD1P28340 1107 aa18.56■□□□□ 0.56
POLR2J3-219ENST00000608621 LY75O60449 1722 aa18.56■□□□□ 0.56
POLR2J3-219ENST00000608621 PCDH11XQ9BZA7 1347 aa18.55■□□□□ 0.56
POLR2J3-219ENST00000608621 PCDH11YQ9BZA8 1340 aa18.55■□□□□ 0.56
POLR2J3-219ENST00000608621 CYP27B1O15528 508 aa18.55■□□□□ 0.56
POLR2J3-219ENST00000608621 KLHL34Q8N239 644 aa18.55■□□□□ 0.56
POLR2J3-219ENST00000608621 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
POLR2J3-219ENST00000608621 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
POLR2J3-219ENST00000608621 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
POLR2J3-219ENST00000608621 QSER1Q2KHR3 1735 aa18.54■□□□□ 0.56
POLR2J3-219ENST00000608621 MAP3K5Q99683 1374 aa18.54■□□□□ 0.56
POLR2J3-219ENST00000608621 MSH5O43196 834 aa18.53■□□□□ 0.56
POLR2J3-219ENST00000608621 WASHC2AQ641Q2 1341 aa18.52■□□□□ 0.56
POLR2J3-219ENST00000608621 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.56
POLR2J3-219ENST00000608621 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
POLR2J3-219ENST00000608621 GPR162Q16538 588 aa18.51■□□□□ 0.55
POLR2J3-219ENST00000608621 EYA1Q99502 592 aa18.51■□□□□ 0.55
POLR2J3-219ENST00000608621 POLKQ9UBT6 870 aa18.5■□□□□ 0.55
POLR2J3-219ENST00000608621 MAP2P11137 1827 aaKnown RBP18.49■□□□□ 0.55
POLR2J3-219ENST00000608621 ZNF784Q8NCA9 323 aaPredicted RBP18.49■□□□□ 0.55
POLR2J3-219ENST00000608621 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
POLR2J3-219ENST00000608621 PALLDQ8WX93 1383 aa18.48■□□□□ 0.55
POLR2J3-219ENST00000608621 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
POLR2J3-219ENST00000608621 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
POLR2J3-219ENST00000608621 COL24A1Q17RW2 1714 aa18.48■□□□□ 0.55
POLR2J3-219ENST00000608621 HMGB2P26583 209 aaKnown RBP18.47■□□□□ 0.55
POLR2J3-219ENST00000608621 PIGBQ92521 554 aa18.47■□□□□ 0.55
POLR2J3-219ENST00000608621 SMARCC1Q92922 1105 aaPredicted RBP18.47■□□□□ 0.55
POLR2J3-219ENST00000608621 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
POLR2J3-219ENST00000608621 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
POLR2J3-219ENST00000608621 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
POLR2J3-219ENST00000608621 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.55
POLR2J3-219ENST00000608621 FLAD1Q8NFF5 587 aa18.46■□□□□ 0.55
POLR2J3-219ENST00000608621 NLGN2Q8NFZ4 835 aa18.46■□□□□ 0.55
POLR2J3-219ENST00000608621 CHD4Q14839 1912 aa18.46■□□□□ 0.55
POLR2J3-219ENST00000608621 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
POLR2J3-219ENST00000608621 ITGB4P16144 1822 aa18.45■□□□□ 0.54
POLR2J3-219ENST00000608621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
POLR2J3-219ENST00000608621 EIF4A2Q14240 407 aaKnown RBP18.44■□□□□ 0.54
POLR2J3-219ENST00000608621 PANK3Q9H999 370 aa18.44■□□□□ 0.54
POLR2J3-219ENST00000608621 PKD1L3Q7Z443 1732 aa18.43■□□□□ 0.54
POLR2J3-219ENST00000608621 IFNL2Q8IZJ0 200 aa18.43■□□□□ 0.54
POLR2J3-219ENST00000608621 C5P01031 1676 aa18.43■□□□□ 0.54
POLR2J3-219ENST00000608621 ANKRD26Q9UPS8 1709 aa18.43■□□□□ 0.54
POLR2J3-219ENST00000608621 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
POLR2J3-219ENST00000608621 UTRNP46939 3433 aa18.42■□□□□ 0.54
POLR2J3-219ENST00000608621 PHKG2P15735 406 aa18.42■□□□□ 0.54
POLR2J3-219ENST00000608621 AK7Q96M32 723 aa18.42■□□□□ 0.54
POLR2J3-219ENST00000608621 TAF1LQ8IZX4 1826 aa18.42■□□□□ 0.54
POLR2J3-219ENST00000608621 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
POLR2J3-219ENST00000608621 TMOD3Q9NYL9 352 aa18.41■□□□□ 0.54
POLR2J3-219ENST00000608621 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
POLR2J3-219ENST00000608621 SIK1P57059 783 aa18.4■□□□□ 0.54
POLR2J3-219ENST00000608621 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
POLR2J3-219ENST00000608621 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
POLR2J3-219ENST00000608621 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
POLR2J3-219ENST00000608621 PHF14O94880 888 aa18.38■□□□□ 0.53
POLR2J3-219ENST00000608621 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
POLR2J3-219ENST00000608621 LINC00116Q8NCU8 138 aa18.38■□□□□ 0.53
POLR2J3-219ENST00000608621 C4BP0C0L5 1744 aa18.37■□□□□ 0.53
POLR2J3-219ENST00000608621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
POLR2J3-219ENST00000608621 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
POLR2J3-219ENST00000608621 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
POLR2J3-219ENST00000608621 CD2APQ9Y5K6 639 aa18.37■□□□□ 0.53
POLR2J3-219ENST00000608621 GRIN3BO60391 1043 aa18.36■□□□□ 0.53
POLR2J3-219ENST00000608621 ITPK1Q13572 414 aa18.36■□□□□ 0.53
POLR2J3-219ENST00000608621 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
POLR2J3-219ENST00000608621 SSFA2P28290 1259 aa18.35■□□□□ 0.53
POLR2J3-219ENST00000608621 PLEKHO1Q53GL0 409 aaPredicted RBP18.35■□□□□ 0.53
POLR2J3-219ENST00000608621 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
POLR2J3-219ENST00000608621 UBR3Q6ZT12 1888 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms