RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 CC2D1BQ5T0F9 858 aaKnown RBP19.82■□□□□ 0.76
HDDC2-204ENST00000608295 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
HDDC2-204ENST00000608295 RGPD3A6NKT7 1758 aaPredicted RBP19.82■□□□□ 0.76
HDDC2-204ENST00000608295 RGPD4Q7Z3J3 1758 aa19.82■□□□□ 0.76
HDDC2-204ENST00000608295 R3HDM1Q15032 1099 aaKnown RBP19.81■□□□□ 0.76
HDDC2-204ENST00000608295 BCL11BQ9C0K0 894 aaPredicted RBP19.8■□□□□ 0.76
HDDC2-204ENST00000608295 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
HDDC2-204ENST00000608295 AMER1Q5JTC6 1135 aaPredicted RBP19.79■□□□□ 0.76
HDDC2-204ENST00000608295 SYTL4Q96C24 671 aaPredicted RBP19.79■□□□□ 0.76
HDDC2-204ENST00000608295 PKD1L3Q7Z443 1732 aa19.79■□□□□ 0.76
HDDC2-204ENST00000608295 BCL9O00512 1426 aa19.78■□□□□ 0.76
HDDC2-204ENST00000608295 EIF4A2Q14240 407 aaKnown RBP19.78■□□□□ 0.76
HDDC2-204ENST00000608295 ZCRB1Q8TBF4 217 aaKnown RBP19.78■□□□□ 0.76
HDDC2-204ENST00000608295 PARD3Q8TEW0 1356 aa19.77■□□□□ 0.76
HDDC2-204ENST00000608295 EYA1Q99502 592 aa19.76■□□□□ 0.75
HDDC2-204ENST00000608295 TOGARAM1Q9Y4F4 1720 aa19.76■□□□□ 0.75
HDDC2-204ENST00000608295 NCAPD2Q15021 1401 aa19.73■□□□□ 0.75
HDDC2-204ENST00000608295 PER1O15534 1290 aaPredicted RBP19.72■□□□□ 0.75
HDDC2-204ENST00000608295 ANO8Q9HCE9 1232 aaPredicted RBP19.72■□□□□ 0.75
HDDC2-204ENST00000608295 PCDH11XQ9BZA7 1347 aa19.72■□□□□ 0.75
HDDC2-204ENST00000608295 PCDH11YQ9BZA8 1340 aa19.72■□□□□ 0.75
HDDC2-204ENST00000608295 PRIM1P49642 420 aaKnown RBP19.71■□□□□ 0.75
HDDC2-204ENST00000608295 ITGB4P16144 1822 aa19.7■□□□□ 0.74
HDDC2-204ENST00000608295 PLSCR1O15162 318 aa19.7■□□□□ 0.74
HDDC2-204ENST00000608295 TXNRD1Q16881 649 aa19.7■□□□□ 0.74
HDDC2-204ENST00000608295 CYP27B1O15528 508 aa19.69■□□□□ 0.74
HDDC2-204ENST00000608295 NBPF14Q5TI25 921 aa19.69■□□□□ 0.74
HDDC2-204ENST00000608295 AEBP1Q8IUX7 1158 aa19.69■□□□□ 0.74
HDDC2-204ENST00000608295 PROM2Q8N271 834 aa19.69■□□□□ 0.74
HDDC2-204ENST00000608295 KCNQ4P56696 695 aa19.68■□□□□ 0.74
HDDC2-204ENST00000608295 IGSF1Q8N6C5 1336 aa19.68■□□□□ 0.74
HDDC2-204ENST00000608295 LRP5O75197 1615 aa19.68■□□□□ 0.74
HDDC2-204ENST00000608295 MTHFSP49914 203 aa19.67■□□□□ 0.74
HDDC2-204ENST00000608295 PAPPAQ13219 1627 aa19.65■□□□□ 0.74
HDDC2-204ENST00000608295 SPG7Q9UQ90 795 aa19.65■□□□□ 0.74
HDDC2-204ENST00000608295 LY75O60449 1722 aa19.65■□□□□ 0.74
HDDC2-204ENST00000608295 TUBGCP6Q96RT7 1819 aa19.63■□□□□ 0.73
HDDC2-204ENST00000608295 CASZ1Q86V15 1759 aa19.63■□□□□ 0.73
HDDC2-204ENST00000608295 SULT6B1Q6IMI4 303 aa19.63■□□□□ 0.73
HDDC2-204ENST00000608295 MPRIPQ6WCQ1 1025 aa19.63■□□□□ 0.73
HDDC2-204ENST00000608295 PDGFDQ9GZP0 370 aaPredicted RBP19.63■□□□□ 0.73
HDDC2-204ENST00000608295 SRCAPQ6ZRS2 3230 aa19.62■□□□□ 0.73
HDDC2-204ENST00000608295 HMOX1P09601 288 aa19.62■□□□□ 0.73
HDDC2-204ENST00000608295 IL13P35225 146 aa19.62■□□□□ 0.73
HDDC2-204ENST00000608295 STK32BQ9NY57 414 aa19.62■□□□□ 0.73
HDDC2-204ENST00000608295 LRRC4BQ9NT99 713 aa19.61■□□□□ 0.73
HDDC2-204ENST00000608295 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
HDDC2-204ENST00000608295 NPC1L1Q9UHC9 1359 aa19.6■□□□□ 0.73
HDDC2-204ENST00000608295 ZNF530Q6P9A1 599 aaPredicted RBP19.6■□□□□ 0.73
HDDC2-204ENST00000608295 PHKG2P15735 406 aa19.59■□□□□ 0.73
HDDC2-204ENST00000608295 ZNF827Q17R98 1081 aa19.59■□□□□ 0.73
HDDC2-204ENST00000608295 C5P01031 1676 aa19.59■□□□□ 0.73
HDDC2-204ENST00000608295 U2SURPO15042 1029 aaKnown RBP19.58■□□□□ 0.72
HDDC2-204ENST00000608295 CCNL1Q9UK58 526 aaPredicted RBP19.58■□□□□ 0.72
HDDC2-204ENST00000608295 VIRMAQ69YN4 1812 aaKnown RBP19.58■□□□□ 0.72
HDDC2-204ENST00000608295 PALLDQ8WX93 1383 aa19.57■□□□□ 0.72
HDDC2-204ENST00000608295 DIAPH1O60610 1272 aaKnown RBP19.57■□□□□ 0.72
HDDC2-204ENST00000608295 ZBTB7AO95365 584 aa19.57■□□□□ 0.72
HDDC2-204ENST00000608295 SLC15A2Q16348 729 aa19.57■□□□□ 0.72
HDDC2-204ENST00000608295 IFNL2Q8IZJ0 200 aa19.57■□□□□ 0.72
HDDC2-204ENST00000608295 PLEKHO1Q53GL0 409 aaPredicted RBP19.56■□□□□ 0.72
HDDC2-204ENST00000608295 TAF1LQ8IZX4 1826 aa19.55■□□□□ 0.72
HDDC2-204ENST00000608295 KDM6AO15550 1401 aaPredicted RBP19.55■□□□□ 0.72
HDDC2-204ENST00000608295 PIGBQ92521 554 aa19.55■□□□□ 0.72
HDDC2-204ENST00000608295 TMOD3Q9NYL9 352 aa19.55■□□□□ 0.72
HDDC2-204ENST00000608295 KDRP35968 1356 aa19.55■□□□□ 0.72
HDDC2-204ENST00000608295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.54■□□□□ 0.723e-9■□□□□ 8.1
HDDC2-204ENST00000608295 PPP2R1AP30153 589 aa19.53■□□□□ 0.72
HDDC2-204ENST00000608295 C1orf141Q5JVX7 400 aa19.53■□□□□ 0.72
HDDC2-204ENST00000608295 NKX1-1Q15270 411 aaPredicted RBP19.52■□□□□ 0.72
HDDC2-204ENST00000608295 SLC27A3Q5K4L6 730 aa19.52■□□□□ 0.72
HDDC2-204ENST00000608295 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
HDDC2-204ENST00000608295 SCN11AQ9UI33 1791 aa19.52■□□□□ 0.71
HDDC2-204ENST00000608295 DDX10Q13206 875 aaKnown RBP19.51■□□□□ 0.71
HDDC2-204ENST00000608295 QSER1Q2KHR3 1735 aa19.51■□□□□ 0.71
HDDC2-204ENST00000608295 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
HDDC2-204ENST00000608295 CFAP53Q96M91 514 aa19.5■□□□□ 0.71
HDDC2-204ENST00000608295 SPON1Q9HCB6 807 aa19.5■□□□□ 0.71
HDDC2-204ENST00000608295 PPP1R1BQ9UD71 204 aaPredicted RBP19.5■□□□□ 0.71
HDDC2-204ENST00000608295 ASAP1Q9ULH1 1129 aa19.5■□□□□ 0.71
HDDC2-204ENST00000608295 C4BP0C0L5 1744 aa19.49■□□□□ 0.71
HDDC2-204ENST00000608295 AKT1S1Q96B36 256 aa19.49■□□□□ 0.71
HDDC2-204ENST00000608295 TFCP2L1Q9NZI6 479 aa19.49■□□□□ 0.71
HDDC2-204ENST00000608295 MSH5O43196 834 aa19.47■□□□□ 0.71
HDDC2-204ENST00000608295 DCAF5Q96JK2 942 aa19.47■□□□□ 0.71
HDDC2-204ENST00000608295 PNPLA7Q6ZV29 1317 aa19.47■□□□□ 0.71
HDDC2-204ENST00000608295 PLEKHG2Q9H7P9 1386 aa19.46■□□□□ 0.71
HDDC2-204ENST00000608295 HSP90AB1P08238 724 aaKnown RBP19.46■□□□□ 0.71
HDDC2-204ENST00000608295 CABP4P57796 275 aa19.46■□□□□ 0.71
HDDC2-204ENST00000608295 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
HDDC2-204ENST00000608295 SMARCC1Q92922 1105 aaPredicted RBP19.46■□□□□ 0.71
HDDC2-204ENST00000608295 MTHFSDQ2M296 383 aaKnown RBP19.45■□□□□ 0.7
HDDC2-204ENST00000608295 RBM42Q9BTD8 480 aaKnown RBP19.45■□□□□ 0.7
HDDC2-204ENST00000608295 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
HDDC2-204ENST00000608295 UBR3Q6ZT12 1888 aa19.44■□□□□ 0.7
HDDC2-204ENST00000608295 LOC102724428A0A0B4J2F2 783 aa19.44■□□□□ 0.7
HDDC2-204ENST00000608295 PHF14O94880 888 aa19.44■□□□□ 0.7
HDDC2-204ENST00000608295 SIK1P57059 783 aa19.44■□□□□ 0.7
HDDC2-204ENST00000608295 U2AF1L5P0DN76 240 aaPredicted RBP19.43■□□□□ 0.7
HDDC2-204ENST00000608295 PRKAR2BP31323 418 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms