RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 CASQ1P31415 396 aa8.27□□□□□ -1.08
SNX5-218ENST00000606570 ZSCAN26Q16670 478 aa8.27□□□□□ -1.08
SNX5-218ENST00000606570 FEZ1Q99689 392 aa8.27□□□□□ -1.08
SNX5-218ENST00000606570 OGFRQ9NZT2 677 aa8.27□□□□□ -1.08
SNX5-218ENST00000606570 PAXBP1Q9Y5B6 917 aa8.27□□□□□ -1.08
SNX5-218ENST00000606570 PBRM1Q86U86 1689 aa8.27□□□□□ -1.09
SNX5-218ENST00000606570 OSCARQ8IYS5 282 aa8.27□□□□□ -1.09
SNX5-218ENST00000606570 RWDD1Q9H446 243 aaPredicted RBP8.27□□□□□ -1.09
SNX5-218ENST00000606570 CUL7Q14999 1698 aa8.27□□□□□ -1.09
SNX5-218ENST00000606570 DDX11L8A8MPP1 907 aa8.27□□□□□ -1.09
SNX5-218ENST00000606570 SETSIPP0DME0 302 aa8.27□□□□□ -1.09
SNX5-218ENST00000606570 TBC1D2Q9BYX2 928 aa8.27□□□□□ -1.09
SNX5-218ENST00000606570 CPSF2Q9P2I0 782 aaKnown RBP8.27□□□□□ -1.09
SNX5-218ENST00000606570 RRP7AQ9Y3A4 280 aaKnown RBP8.27□□□□□ -1.09
SNX5-218ENST00000606570 CDK13Q14004 1512 aaKnown RBP8.27□□□□□ -1.09
SNX5-218ENST00000606570 DENND4BO75064 1496 aaPredicted RBP8.27□□□□□ -1.09
SNX5-218ENST00000606570 GAPVD1Q14C86 1478 aa8.27□□□□□ -1.09
SNX5-218ENST00000606570 ABCC5O15440 1437 aa8.27□□□□□ -1.09
SNX5-218ENST00000606570 ZNF608Q9ULD9 1512 aaPredicted RBP8.26□□□□□ -1.09
SNX5-218ENST00000606570 MAP2K2P36507 400 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 FOSBP53539 338 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 KDM6BO15054 1643 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 ROCK1Q13464 1354 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 UGGT2Q9NYU1 1516 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 SMAPO00193 183 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 PPP2R1AP30153 589 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 E2F4Q16254 413 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 ZNF710Q8N1W2 664 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 ANKRD20A12PQ8NF67 263 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 MYRIPQ8NFW9 859 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 GBP4Q96PP9 640 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 HECW1Q76N89 1606 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 SWT1Q5T5J6 900 aaKnown RBP8.26□□□□□ -1.09
SNX5-218ENST00000606570 CCDC82Q8N4S0 544 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 ZNF232Q9UNY5 417 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 ANKRD50Q9ULJ7 1429 aa8.26□□□□□ -1.09
SNX5-218ENST00000606570 PSMD2Q13200 908 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 MAP9Q49MG5 647 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 JAKMIP3Q5VZ66 844 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 MKL1Q969V6 931 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 ATF5Q9Y2D1 282 aaPredicted RBP8.25□□□□□ -1.09
SNX5-218ENST00000606570 SLFN5Q08AF3 891 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 GRIN2BQ13224 1484 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 TERF2Q15554 542 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 JARID2Q92833 1246 aaPredicted RBP8.25□□□□□ -1.09
SNX5-218ENST00000606570 C22orf23Q9BZE7 217 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 PARD3Q8TEW0 1356 aa8.25□□□□□ -1.09
SNX5-218ENST00000606570 HNRNPMP52272 730 aaKnown RBP eCLIP8.24□□□□□ -1.09
SNX5-218ENST00000606570 C11orf91Q3C1V1 193 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 AP1ARQ63HQ0 302 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 TRIM74Q86UV6 250 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 TRIM73Q86UV7 250 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 GAS2L2Q8NHY3 880 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 ZNF396Q96N95 335 aaPredicted RBP8.24□□□□□ -1.09
SNX5-218ENST00000606570 CHCHD3Q9NX63 227 aaKnown RBP8.24□□□□□ -1.09
SNX5-218ENST00000606570 HNRNPH2P55795 449 aaKnown RBP8.24□□□□□ -1.09
SNX5-218ENST00000606570 TRDNQ13061 729 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 ARPC5LQ9BPX5 153 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 CTDP1Q9Y5B0 961 aaPredicted RBP8.24□□□□□ -1.09
SNX5-218ENST00000606570 EPRSP07814 1512 aaKnown RBP8.24□□□□□ -1.09
SNX5-218ENST00000606570 SKILP12757 684 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 ARL10Q8N8L6 244 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 RANBP17Q9H2T7 1088 aaKnown RBP8.24□□□□□ -1.09
SNX5-218ENST00000606570 RPGRIP1LQ68CZ1 1315 aa8.24□□□□□ -1.09
SNX5-218ENST00000606570 U2AF1L5P0DN76 240 aaPredicted RBP8.23□□□□□ -1.09
SNX5-218ENST00000606570 U2AF1Q01081 240 aaKnown RBP eCLIP8.23□□□□□ -1.097e-33■■□□□ 14.3
SNX5-218ENST00000606570 C16orf87Q6PH81 154 aa8.23□□□□□ -1.09
SNX5-218ENST00000606570 CCDC144AA2RUR9 1427 aa8.23□□□□□ -1.09
SNX5-218ENST00000606570 CCDC196A0A1B0GTZ2 297 aa8.23□□□□□ -1.09
SNX5-218ENST00000606570 FAM177BA6PVY3 158 aa8.23□□□□□ -1.09
SNX5-218ENST00000606570 TMCO5BA8MYB1 307 aa8.23□□□□□ -1.09
SNX5-218ENST00000606570 EIF3AQ14152 1382 aaKnown RBP8.23□□□□□ -1.09
SNX5-218ENST00000606570 PLEKHH1Q9ULM0 1364 aa8.23□□□□□ -1.09
SNX5-218ENST00000606570 PER1O15534 1290 aaPredicted RBP8.23□□□□□ -1.09
SNX5-218ENST00000606570 RIOK3O14730 519 aaKnown RBP8.22□□□□□ -1.09
SNX5-218ENST00000606570 OATP04181 439 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 PDE3AQ14432 1141 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 HSP90AB2PQ58FF8 381 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 ZFYVE27Q5T4F4 411 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 WDR78Q5VTH9 848 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 TCOF1Q13428 1488 aaKnown RBP8.22□□□□□ -1.09
SNX5-218ENST00000606570 ATP2B1P20020 1258 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 PUS10Q3MIT2 529 aaKnown RBP8.22□□□□□ -1.09
SNX5-218ENST00000606570 TBC1D32Q96NH3 1257 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 FMNL2Q96PY5 1086 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 ETAA1Q9NY74 926 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 PHF8Q9UPP1 1060 aa8.22□□□□□ -1.09
SNX5-218ENST00000606570 MRC2Q9UBG0 1479 aa8.21□□□□□ -1.09
SNX5-218ENST00000606570 KINO60870 393 aaKnown RBP8.21□□□□□ -1.09
SNX5-218ENST00000606570 NAIF1Q69YI7 327 aaPredicted RBP8.21□□□□□ -1.09
SNX5-218ENST00000606570 NFXL1Q6ZNB6 911 aa8.21□□□□□ -1.09
SNX5-218ENST00000606570 ITPRIPQ8IWB1 547 aa8.21□□□□□ -1.09
SNX5-218ENST00000606570 CWC15Q9P013 229 aaKnown RBP8.21□□□□□ -1.09
SNX5-218ENST00000606570 A0A1B0GUL7 405 aa8.21□□□□□ -1.1
SNX5-218ENST00000606570 CD151P48509 253 aa8.21□□□□□ -1.1
SNX5-218ENST00000606570 NASPP49321 788 aaPredicted RBP8.21□□□□□ -1.1
SNX5-218ENST00000606570 LONRF3Q496Y0 759 aa8.21□□□□□ -1.1
SNX5-218ENST00000606570 CCDC34Q96HJ3 373 aa8.21□□□□□ -1.1
SNX5-218ENST00000606570 KIF2CQ99661 725 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms