RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
LINC00458-204ENST00000606055 DDB1Q16531 1140 aa9.58□□□□□ -0.88
LINC00458-204ENST00000606055 MIER1Q8N108 512 aa9.58□□□□□ -0.88
LINC00458-204ENST00000606055 MRS2Q9HD23 443 aa9.58□□□□□ -0.88
LINC00458-204ENST00000606055 SHANK3Q9BYB0 1731 aa9.58□□□□□ -0.88
LINC00458-204ENST00000606055 DISP2A7MBM2 1401 aa9.57□□□□□ -0.88
LINC00458-204ENST00000606055 CCDC125Q86Z20 511 aa9.57□□□□□ -0.88
LINC00458-204ENST00000606055 EYA1Q99502 592 aa9.57□□□□□ -0.88
LINC00458-204ENST00000606055 OVOS2A0A0G2JMS6 1433 aa9.56□□□□□ -0.88
LINC00458-204ENST00000606055 TNS2Q63HR2 1409 aa9.56□□□□□ -0.88
LINC00458-204ENST00000606055 EXOC5O00471 708 aa9.56□□□□□ -0.88
LINC00458-204ENST00000606055 IL2RBP14784 551 aa9.56□□□□□ -0.88
LINC00458-204ENST00000606055 WDR43Q15061 677 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC00458-204ENST00000606055 AMOTQ4VCS5 1084 aa9.56□□□□□ -0.88
LINC00458-204ENST00000606055 FAM196AQ6ZSG2 479 aa9.56□□□□□ -0.88
LINC00458-204ENST00000606055 PKD1L3Q7Z443 1732 aa9.56□□□□□ -0.88
LINC00458-204ENST00000606055 CNGB1Q14028 1251 aaPredicted RBP9.55□□□□□ -0.88
LINC00458-204ENST00000606055 FAM182BQ5T319 152 aa9.55□□□□□ -0.88
LINC00458-204ENST00000606055 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
LINC00458-204ENST00000606055 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
LINC00458-204ENST00000606055 DOT1LQ8TEK3 1739 aa9.55□□□□□ -0.88
LINC00458-204ENST00000606055 RGPD3A6NKT7 1758 aaPredicted RBP9.55□□□□□ -0.88
LINC00458-204ENST00000606055 RGPD4Q7Z3J3 1758 aa9.55□□□□□ -0.88
LINC00458-204ENST00000606055 NHSQ6T4R5 1651 aa9.55□□□□□ -0.88
LINC00458-204ENST00000606055 BTAF1O14981 1849 aa9.54□□□□□ -0.88
LINC00458-204ENST00000606055 ITGB4P16144 1822 aa9.54□□□□□ -0.88
LINC00458-204ENST00000606055 U2AF1L5P0DN76 240 aaPredicted RBP9.54□□□□□ -0.88
LINC00458-204ENST00000606055 U2AF1Q01081 240 aaKnown RBP eCLIP9.54□□□□□ -0.88
LINC00458-204ENST00000606055 PLEKHF1Q96S99 279 aa9.54□□□□□ -0.88
LINC00458-204ENST00000606055 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
LINC00458-204ENST00000606055 HTATSF1O43719 755 aaKnown RBP9.53□□□□□ -0.88
LINC00458-204ENST00000606055 NEFMP07197 916 aa9.53□□□□□ -0.88
LINC00458-204ENST00000606055 TATP17735 454 aaPredicted RBP9.53□□□□□ -0.88
LINC00458-204ENST00000606055 SULT6B1Q6IMI4 303 aa9.53□□□□□ -0.88
LINC00458-204ENST00000606055 USHBP1Q8N6Y0 703 aa9.53□□□□□ -0.88
LINC00458-204ENST00000606055 RAPGEF4Q8WZA2 1011 aa9.53□□□□□ -0.88
LINC00458-204ENST00000606055 RUNDC1Q96C34 613 aa9.53□□□□□ -0.88
LINC00458-204ENST00000606055 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
LINC00458-204ENST00000606055 BCL9O00512 1426 aa9.53□□□□□ -0.88
LINC00458-204ENST00000606055 MEGF6O75095 1541 aa9.52□□□□□ -0.88
LINC00458-204ENST00000606055 BAG6P46379 1132 aa9.52□□□□□ -0.89
LINC00458-204ENST00000606055 CCDC27Q2M243 656 aa9.52□□□□□ -0.89
LINC00458-204ENST00000606055 GAS2L2Q8NHY3 880 aa9.52□□□□□ -0.89
LINC00458-204ENST00000606055 RREB1Q92766 1687 aa9.51□□□□□ -0.89
LINC00458-204ENST00000606055 U2SURPO15042 1029 aaKnown RBP9.51□□□□□ -0.89
LINC00458-204ENST00000606055 TRIM37O94972 964 aa9.51□□□□□ -0.89
LINC00458-204ENST00000606055 CCDC184Q52MB2 194 aa9.51□□□□□ -0.89
LINC00458-204ENST00000606055 PLEKHO1Q53GL0 409 aaPredicted RBP9.51□□□□□ -0.89
LINC00458-204ENST00000606055 MARCH10Q8NA82 808 aaPredicted RBP9.51□□□□□ -0.89
LINC00458-204ENST00000606055 SPG7Q9UQ90 795 aa9.51□□□□□ -0.89
LINC00458-204ENST00000606055 HSP90AB1P08238 724 aaKnown RBP9.5□□□□□ -0.89
LINC00458-204ENST00000606055 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
LINC00458-204ENST00000606055 NKX1-1Q15270 411 aaPredicted RBP9.5□□□□□ -0.89
LINC00458-204ENST00000606055 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
LINC00458-204ENST00000606055 DDX54Q8TDD1 881 aaKnown RBP9.5□□□□□ -0.89
LINC00458-204ENST00000606055 NUP188Q5SRE5 1749 aa9.5□□□□□ -0.89
LINC00458-204ENST00000606055 PCDH11XQ9BZA7 1347 aa9.5□□□□□ -0.89
LINC00458-204ENST00000606055 PCDH11YQ9BZA8 1340 aa9.5□□□□□ -0.89
LINC00458-204ENST00000606055 APBA3O96018 575 aa9.49□□□□□ -0.89
LINC00458-204ENST00000606055 PRKAR2BP31323 418 aa9.49□□□□□ -0.89
LINC00458-204ENST00000606055 DEFB132Q7Z7B7 95 aa9.49□□□□□ -0.89
LINC00458-204ENST00000606055 MAPK8IP3Q9UPT6 1336 aa9.49□□□□□ -0.89
LINC00458-204ENST00000606055 TOGARAM1Q9Y4F4 1720 aa9.48□□□□□ -0.89
LINC00458-204ENST00000606055 SCN11AQ9UI33 1791 aa9.48□□□□□ -0.89
LINC00458-204ENST00000606055 NFE2L2Q16236 605 aa9.48□□□□□ -0.89
LINC00458-204ENST00000606055 AKAP4Q5JQC9 854 aa9.48□□□□□ -0.89
LINC00458-204ENST00000606055 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
LINC00458-204ENST00000606055 BABAM1Q9NWV8 329 aa9.48□□□□□ -0.89
LINC00458-204ENST00000606055 CALD1Q05682 793 aaKnown RBP9.47□□□□□ -0.89
LINC00458-204ENST00000606055 EN1Q05925 392 aaPredicted RBP9.47□□□□□ -0.89
LINC00458-204ENST00000606055 IFNL2Q8IZJ0 200 aa9.47□□□□□ -0.89
LINC00458-204ENST00000606055 ACSBG1Q96GR2 724 aa9.47□□□□□ -0.89
LINC00458-204ENST00000606055 BCL11BQ9C0K0 894 aaPredicted RBP9.47□□□□□ -0.89
LINC00458-204ENST00000606055 ADAMTS7Q9UKP4 1686 aa9.47□□□□□ -0.89
LINC00458-204ENST00000606055 LY75O60449 1722 aa9.47□□□□□ -0.89
LINC00458-204ENST00000606055 HMOX1P09601 288 aa9.46□□□□□ -0.9
LINC00458-204ENST00000606055 TMPOP42166 694 aaKnown RBP9.46□□□□□ -0.9
LINC00458-204ENST00000606055 DCAF5Q96JK2 942 aa9.46□□□□□ -0.9
LINC00458-204ENST00000606055 IL16Q14005 1332 aa9.46□□□□□ -0.9
LINC00458-204ENST00000606055 DLG5Q8TDM6 1919 aa9.46□□□□□ -0.9
LINC00458-204ENST00000606055 CEMIPQ8WUJ3 1361 aa9.46□□□□□ -0.9
LINC00458-204ENST00000606055 MAP3K5Q99683 1374 aa9.46□□□□□ -0.9
LINC00458-204ENST00000606055 TAF1LQ8IZX4 1826 aa9.45□□□□□ -0.9
LINC00458-204ENST00000606055 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
LINC00458-204ENST00000606055 ERVV-2B6SEH9 535 aa9.45□□□□□ -0.9
LINC00458-204ENST00000606055 PHKG2P15735 406 aa9.45□□□□□ -0.9
LINC00458-204ENST00000606055 MTHFSDQ2M296 383 aaKnown RBP9.45□□□□□ -0.9
LINC00458-204ENST00000606055 C1orf141Q5JVX7 400 aa9.45□□□□□ -0.9
LINC00458-204ENST00000606055 FAM9BQ8IZU0 186 aa9.45□□□□□ -0.9
LINC00458-204ENST00000606055 PHACTR3Q96KR7 559 aa9.45□□□□□ -0.9
LINC00458-204ENST00000606055 CYP27B1O15528 508 aa9.44□□□□□ -0.9
LINC00458-204ENST00000606055 HMGB2P26583 209 aaKnown RBP9.44□□□□□ -0.9
LINC00458-204ENST00000606055 EZH2Q15910 746 aaKnown RBP9.44□□□□□ -0.9
LINC00458-204ENST00000606055 ZNF530Q6P9A1 599 aaPredicted RBP9.44□□□□□ -0.9
LINC00458-204ENST00000606055 WDR63Q8IWG1 891 aa9.44□□□□□ -0.9
LINC00458-204ENST00000606055 SYTL4Q96C24 671 aaPredicted RBP9.44□□□□□ -0.9
LINC00458-204ENST00000606055 ZNF521Q96K83 1311 aa9.44□□□□□ -0.9
LINC00458-204ENST00000606055 MRC1P22897 1456 aa9.44□□□□□ -0.9
LINC00458-204ENST00000606055 ZBED9Q6R2W3 1325 aa9.43□□□□□ -0.9
LINC00458-204ENST00000606055 APAF1O14727 1248 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms