RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 KIF24Q5T7B8 1368 aa24.89■■□□□ 1.57
CCDC12-212ENST00000605358 CHD4Q14839 1912 aa24.88■■□□□ 1.57
CCDC12-212ENST00000605358 SMG6Q86US8 1419 aaKnown RBP24.88■■□□□ 1.57
CCDC12-212ENST00000605358 POLD1P28340 1107 aa24.88■■□□□ 1.57
CCDC12-212ENST00000605358 SYTL4Q96C24 671 aaPredicted RBP24.88■■□□□ 1.57
CCDC12-212ENST00000605358 COL24A1Q17RW2 1714 aa24.87■■□□□ 1.57
CCDC12-212ENST00000605358 LY75O60449 1722 aa24.86■■□□□ 1.57
CCDC12-212ENST00000605358 TFCP2L1Q9NZI6 479 aa24.86■■□□□ 1.57
CCDC12-212ENST00000605358 RGPD2P0DJD1 1756 aa24.85■■□□□ 1.57
CCDC12-212ENST00000605358 FBLN1P23142 703 aa24.85■■□□□ 1.57
CCDC12-212ENST00000605358 NBPF6Q5VWK0 638 aa24.85■■□□□ 1.57
CCDC12-212ENST00000605358 RAPGEF4Q8WZA2 1011 aa24.85■■□□□ 1.57
CCDC12-212ENST00000605358 NBPF4Q96M43 638 aa24.85■■□□□ 1.57
CCDC12-212ENST00000605358 SHANK3Q9BYB0 1731 aa24.85■■□□□ 1.57
CCDC12-212ENST00000605358 MEGF6O75095 1541 aa24.85■■□□□ 1.57
CCDC12-212ENST00000605358 PNPLA7Q6ZV29 1317 aa24.85■■□□□ 1.57
CCDC12-212ENST00000605358 DOT1LQ8TEK3 1739 aa24.84■■□□□ 1.57
CCDC12-212ENST00000605358 NSD2O96028 1365 aa24.84■■□□□ 1.57
CCDC12-212ENST00000605358 USP47Q96K76 1375 aa24.84■■□□□ 1.57
CCDC12-212ENST00000605358 UTRNP46939 3433 aa24.84■■□□□ 1.57
CCDC12-212ENST00000605358 INSRP06213 1382 aa24.83■■□□□ 1.57
CCDC12-212ENST00000605358 RRS1Q15050 365 aaKnown RBP24.83■■□□□ 1.57
CCDC12-212ENST00000605358 GGNBP2Q9H3C7 697 aa24.83■■□□□ 1.57
CCDC12-212ENST00000605358 ZNF784Q8NCA9 323 aaPredicted RBP24.82■■□□□ 1.56
CCDC12-212ENST00000605358 TATP17735 454 aaPredicted RBP24.81■■□□□ 1.56
CCDC12-212ENST00000605358 CCNL1Q9UK58 526 aaPredicted RBP24.81■■□□□ 1.56
CCDC12-212ENST00000605358 FLT4P35916 1363 aa24.8■■□□□ 1.56
CCDC12-212ENST00000605358 TIMELESSQ9UNS1 1208 aa24.79■■□□□ 1.56
CCDC12-212ENST00000605358 PCDH11XQ9BZA7 1347 aa24.79■■□□□ 1.56
CCDC12-212ENST00000605358 PCDH11YQ9BZA8 1340 aa24.79■■□□□ 1.56
CCDC12-212ENST00000605358 KIF20BQ96Q89 1820 aa24.77■■□□□ 1.56
CCDC12-212ENST00000605358 TRIM26Q12899 539 aaPredicted RBP24.77■■□□□ 1.56
CCDC12-212ENST00000605358 GPR162Q16538 588 aa24.77■■□□□ 1.56
CCDC12-212ENST00000605358 TUBGCP6Q96RT7 1819 aa24.77■■□□□ 1.56
CCDC12-212ENST00000605358 HSP90AB2PQ58FF8 381 aa24.76■■□□□ 1.55
CCDC12-212ENST00000605358 FLAD1Q8NFF5 587 aa24.75■■□□□ 1.55
CCDC12-212ENST00000605358 KCNQ4P56696 695 aa24.74■■□□□ 1.55
CCDC12-212ENST00000605358 USHBP1Q8N6Y0 703 aa24.73■■□□□ 1.55
CCDC12-212ENST00000605358 SMARCC1Q92922 1105 aaPredicted RBP24.71■■□□□ 1.55
CCDC12-212ENST00000605358 COL23A1Q86Y22 540 aaPredicted RBP24.7■■□□□ 1.54
CCDC12-212ENST00000605358 CARD14Q9BXL6 1004 aa24.7■■□□□ 1.54
CCDC12-212ENST00000605358 KLHL34Q8N239 644 aa24.69■■□□□ 1.54
CCDC12-212ENST00000605358 NCAPD2Q15021 1401 aa24.69■■□□□ 1.54
CCDC12-212ENST00000605358 CYP27B1O15528 508 aa24.68■■□□□ 1.54
CCDC12-212ENST00000605358 MSH5O43196 834 aa24.68■■□□□ 1.54
CCDC12-212ENST00000605358 GRIN3BO60391 1043 aa24.68■■□□□ 1.54
CCDC12-212ENST00000605358 NKX1-1Q15270 411 aaPredicted RBP24.68■■□□□ 1.54
CCDC12-212ENST00000605358 C5P01031 1676 aa24.68■■□□□ 1.54
CCDC12-212ENST00000605358 PALLDQ8WX93 1383 aa24.67■■□□□ 1.54
CCDC12-212ENST00000605358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.67■■□□□ 1.54
CCDC12-212ENST00000605358 NSD3Q9BZ95 1437 aa24.67■■□□□ 1.54
CCDC12-212ENST00000605358 WASHC2AQ641Q2 1341 aa24.66■■□□□ 1.54
CCDC12-212ENST00000605358 MPRIPQ6WCQ1 1025 aa24.66■■□□□ 1.54
CCDC12-212ENST00000605358 SPG7Q9UQ90 795 aa24.66■■□□□ 1.54
CCDC12-212ENST00000605358 PKD1L3Q7Z443 1732 aa24.66■■□□□ 1.54
CCDC12-212ENST00000605358 TAF1LQ8IZX4 1826 aa24.65■■□□□ 1.54
CCDC12-212ENST00000605358 CLSPNQ9HAW4 1339 aa24.65■■□□□ 1.54
CCDC12-212ENST00000605358 EMILIN1Q9Y6C2 1016 aa24.65■■□□□ 1.54
CCDC12-212ENST00000605358 ANKRD26Q9UPS8 1709 aa24.64■■□□□ 1.54
CCDC12-212ENST00000605358 CD2APQ9Y5K6 639 aa24.64■■□□□ 1.54
CCDC12-212ENST00000605358 PLEKHG2Q9H7P9 1386 aa24.64■■□□□ 1.53
CCDC12-212ENST00000605358 ITGB4P16144 1822 aa24.63■■□□□ 1.53
CCDC12-212ENST00000605358 NLGN2Q8NFZ4 835 aa24.63■■□□□ 1.53
CCDC12-212ENST00000605358 C1QTNF8P60827 252 aa24.62■■□□□ 1.53
CCDC12-212ENST00000605358 PELP1Q8IZL8 1130 aaKnown RBP24.61■■□□□ 1.53
CCDC12-212ENST00000605358 MAP2P11137 1827 aaKnown RBP24.61■■□□□ 1.53
CCDC12-212ENST00000605358 GOLGB1Q14789 3259 aaKnown RBP24.6■■□□□ 1.53
CCDC12-212ENST00000605358 PPM1GO15355 546 aaPredicted RBP24.59■■□□□ 1.53
CCDC12-212ENST00000605358 PIGBQ92521 554 aa24.59■■□□□ 1.53
CCDC12-212ENST00000605358 AK7Q96M32 723 aa24.59■■□□□ 1.53
CCDC12-212ENST00000605358 C4BP0C0L5 1744 aa24.58■■□□□ 1.53
CCDC12-212ENST00000605358 TOGARAM1Q9Y4F4 1720 aa24.58■■□□□ 1.53
CCDC12-212ENST00000605358 EYA1Q99502 592 aa24.58■■□□□ 1.53
CCDC12-212ENST00000605358 POLKQ9UBT6 870 aa24.57■■□□□ 1.52
CCDC12-212ENST00000605358 SSFA2P28290 1259 aa24.56■■□□□ 1.52
CCDC12-212ENST00000605358 IFNL2Q8IZJ0 200 aa24.56■■□□□ 1.52
CCDC12-212ENST00000605358 YBX3P16989 372 aaKnown RBP eCLIP24.55■■□□□ 1.52
CCDC12-212ENST00000605358 MSL1Q68DK7 614 aa24.55■■□□□ 1.52
CCDC12-212ENST00000605358 TMOD3Q9NYL9 352 aa24.55■■□□□ 1.52
CCDC12-212ENST00000605358 UBR3Q6ZT12 1888 aa24.54■■□□□ 1.52
CCDC12-212ENST00000605358 LOC102724428A0A0B4J2F2 783 aa24.54■■□□□ 1.52
CCDC12-212ENST00000605358 GIGYF1O75420 1035 aaPredicted RBP24.54■■□□□ 1.52
CCDC12-212ENST00000605358 SIK1P57059 783 aa24.54■■□□□ 1.52
CCDC12-212ENST00000605358 PHKG2P15735 406 aa24.52■■□□□ 1.52
CCDC12-212ENST00000605358 SENP3-EIF4A1A0A087X0R7 540 aa24.51■■□□□ 1.51
CCDC12-212ENST00000605358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.51■■□□□ 1.51
CCDC12-212ENST00000605358 HSP90AB1P08238 724 aaKnown RBP24.48■■□□□ 1.51
CCDC12-212ENST00000605358 EIF4A2Q14240 407 aaKnown RBP24.48■■□□□ 1.51
CCDC12-212ENST00000605358 ERVV-2B6SEH9 535 aa24.47■■□□□ 1.51
CCDC12-212ENST00000605358 ATP6V1AP38606 617 aa24.47■■□□□ 1.51
CCDC12-212ENST00000605358 LINC00116Q8NCU8 138 aa24.47■■□□□ 1.51
CCDC12-212ENST00000605358 ASAP1Q9ULH1 1129 aa24.47■■□□□ 1.51
CCDC12-212ENST00000605358 IGSF1Q8N6C5 1336 aa24.45■■□□□ 1.5
CCDC12-212ENST00000605358 PHF14O94880 888 aa24.45■■□□□ 1.5
CCDC12-212ENST00000605358 EIF4G2P78344 907 aaKnown RBP eCLIP24.45■■□□□ 1.51e-7■□□□□ 8.4
CCDC12-212ENST00000605358 AMIGO3Q86WK7 504 aa24.45■■□□□ 1.5
CCDC12-212ENST00000605358 ATG3Q9NT62 314 aa24.45■■□□□ 1.5
CCDC12-212ENST00000605358 ZNF831Q5JPB2 1677 aa24.45■■□□□ 1.5
CCDC12-212ENST00000605358 DCAF5Q96JK2 942 aa24.44■■□□□ 1.5
CCDC12-212ENST00000605358 GNPATO15228 680 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms