RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CRB1P82279 1406 aa15.91■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 NWD2Q9ULI1 1742 aa15.91■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 COL5A2P05997 1499 aaPredicted RBP15.91■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 SOS1Q07889 1333 aaPredicted RBP15.9■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 GNAT3A8MTJ3 354 aa15.89■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 BRPF1P55201 1214 aaPredicted RBP15.89■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 ZC3H6P61129 1189 aaKnown RBP15.89■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 LTV1Q96GA3 475 aaPredicted RBP15.89■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.89■□□□□ 0.136e-8■■□□□ 11.8
NEDD8-MDP1-203ENST00000604306 AXIN2Q9Y2T1 843 aa15.89■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 CEMIPQ8WUJ3 1361 aa15.88■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 ALDH1L2Q3SY69 923 aa15.88■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 PLEKHO1Q53GL0 409 aaPredicted RBP15.88■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 CHL1O00533 1208 aa15.87■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 WDR17Q8IZU2 1322 aa15.87■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 NRAPQ86VF7 1730 aa15.86■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 AAMPQ13685 434 aa15.86■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 PRDM11Q9NQV5 511 aa15.86■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 SHANK3Q9BYB0 1731 aa15.85■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 MS4A1P11836 297 aa15.85■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 AKAP4Q5JQC9 854 aa15.85■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 CABLES1Q8TDN4 633 aa15.85■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 TSR2Q969E8 191 aaKnown RBP15.85■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 MBIPQ9NS73 344 aa15.85■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 ZBTB7CA1YPR0 619 aa15.84■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 KIF16BQ96L93 1317 aa15.84■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 N4BP2Q86UW6 1770 aaPredicted RBP15.84■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 MRC1P22897 1456 aa15.84■□□□□ 0.13
NEDD8-MDP1-203ENST00000604306 FAM83GA6ND36 823 aa15.83■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 PELP1Q8IZL8 1130 aaKnown RBP15.83■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 RAPGEF4Q8WZA2 1011 aa15.83■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 MEGF6O75095 1541 aa15.83■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 USHBP1Q8N6Y0 703 aa15.82■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 TATP17735 454 aaPredicted RBP15.81■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 IRX6P78412 446 aaPredicted RBP15.81■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 MCM10Q7L590 875 aa15.81■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 THUMPD2Q9BTF0 503 aaKnown RBP15.81■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 SPG7Q9UQ90 795 aa15.81■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 BCAR3O75815 825 aa15.8■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 CSB-PGBD3P0DP91 1061 aa15.8■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 C1orf141Q5JVX7 400 aa15.8■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 CARD10Q9BWT7 1032 aa15.8■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 CHMP4AQ9BY43 222 aa15.8■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 NLRP2Q9NX02 1062 aa15.8■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.8■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 VAMP4O75379 141 aa15.79■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 DCTN1Q14203 1278 aa15.79■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 CHRNA2Q15822 529 aa15.79■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 ZNF530Q6P9A1 599 aaPredicted RBP15.79■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 ARHGAP45Q92619 1136 aa15.79■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 IPO8O15397 1037 aaKnown RBP15.78■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 TAF7Q15545 349 aaPredicted RBP15.78■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 TWISTNBQ3B726 338 aaPredicted RBP15.78■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 IL17REQ8NFR9 667 aa15.78■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 LAS1LQ9Y4W2 734 aaKnown RBP15.78■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 LRP6O75581 1613 aa15.77■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 HSP90AB1P08238 724 aaKnown RBP15.77■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 HOXB7P09629 217 aa15.77■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 ZKSCAN2Q63HK3 967 aa15.77■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 SMC4Q9NTJ3 1288 aa15.77■□□□□ 0.12
NEDD8-MDP1-203ENST00000604306 PAPPAQ13219 1627 aa15.76■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 PLIN1O60240 522 aa15.76■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 CANXP27824 592 aaKnown RBP15.76■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 SSH1Q8WYL5 1049 aa15.76■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 TSPYL4Q9UJ04 414 aa15.76■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 LAMB4A4D0S4 1761 aa15.75■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 IFNL2Q8IZJ0 200 aa15.75■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 EXOC6Q8TAG9 804 aa15.75■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 JCADQ9P266 1359 aa15.75■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 PCDH11XQ9BZA7 1347 aa15.74■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 PCDH11YQ9BZA8 1340 aa15.74■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 UBAP1LF5GYI3 381 aa15.74■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 RNMTO43148 476 aaKnown RBP15.74■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 ATF7IPQ6VMQ6 1270 aa15.74■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 TOM1L2Q6ZVM7 507 aa15.74■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 CRBNQ96SW2 442 aa15.74■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 DISP2A7MBM2 1401 aa15.74■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 PHKG2P15735 406 aa15.73■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 TEFQ10587 303 aa15.73■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 C8orf58Q8NAV2 365 aa15.73■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 CERKQ8TCT0 537 aa15.73■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 CCDC136Q96JN2 1154 aa15.73■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 KDM6AO15550 1401 aaPredicted RBP15.73■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 SLIT2O94813 1529 aa15.73■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 IL2RBP14784 551 aa15.72■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 C20orf194Q5TEA3 1177 aa15.72■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 TSPYL6Q8N831 410 aa15.72■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 DCAF5Q96JK2 942 aa15.72■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 PTPRCP08575 1304 aa15.71■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 EVA1CP58658 441 aa15.71■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 DZIP1LQ8IYY4 767 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms