RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, human

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-222	ENST00000604236	DDX49	Q9Y6V7	483 aa	Known RBP	19.01	■□□□□ 0.63
FGFR2-222	ENST00000604236	GOLGA6L3	A6NEY3	463 aa		19	■□□□□ 0.63
FGFR2-222	ENST00000604236	PUS7	Q96PZ0	661 aa	Known RBP	19	■□□□□ 0.63
FGFR2-222	ENST00000604236	GDPD2	Q9HCC8	539 aa		19	■□□□□ 0.63
FGFR2-222	ENST00000604236	CASC1	Q6TDU7	716 aa		19	■□□□□ 0.63
FGFR2-222	ENST00000604236	KDM4A	O75164	1064 aa		19	■□□□□ 0.63
FGFR2-222	ENST00000604236	CCDC27	Q2M243	656 aa		19	■□□□□ 0.63
FGFR2-222	ENST00000604236	NINL	Q9Y2I6	1382 aa		18.99	■□□□□ 0.63
FGFR2-222	ENST00000604236	ABCC11	Q96J66	1382 aa		18.99	■□□□□ 0.63
FGFR2-222	ENST00000604236	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.99	■□□□□ 0.63
FGFR2-222	ENST00000604236	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.98	■□□□□ 0.63
FGFR2-222	ENST00000604236	PHF23	Q9BUL5	403 aa	Predicted RBP	18.98	■□□□□ 0.63
FGFR2-222	ENST00000604236	NUCB1	Q02818	461 aa		18.97	■□□□□ 0.63
FGFR2-222	ENST00000604236	IFT57	Q9NWB7	429 aa		18.97	■□□□□ 0.63
FGFR2-222	ENST00000604236	CHMP5	Q9NZZ3	219 aa		18.97	■□□□□ 0.63
FGFR2-222	ENST00000604236	TAF7	Q15545	349 aa	Predicted RBP	18.97	■□□□□ 0.63
FGFR2-222	ENST00000604236	TRIM44	Q96DX7	344 aa	Predicted RBP	18.97	■□□□□ 0.63
FGFR2-222	ENST00000604236	MCM4	P33991	863 aa		18.96	■□□□□ 0.63
FGFR2-222	ENST00000604236	ZNF692	Q9BU19	519 aa	Predicted RBP	18.96	■□□□□ 0.63
FGFR2-222	ENST00000604236	PRAMEF22	A3QJZ6	481 aa		18.96	■□□□□ 0.63
FGFR2-222	ENST00000604236	PIK3C2B	O00750	1634 aa		18.96	■□□□□ 0.63
FGFR2-222	ENST00000604236	ROBO2	Q9HCK4	1378 aa		18.96	■□□□□ 0.63
FGFR2-222	ENST00000604236	SHPRH	Q149N8	1683 aa		18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	UBTFL1	P0CB47	393 aa	Predicted RBP	18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	PKP1	Q13835	747 aa		18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	SRGAP3	O43295	1099 aa		18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	CPA1	P15085	419 aa		18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	TCEANC2	Q96MN5	208 aa		18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	SDS	P20132	328 aa		18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	ZGPAT	Q8N5A5	531 aa	Known RBP	18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	GAS2L2	Q8NHY3	880 aa		18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	ARHGAP31	Q2M1Z3	1444 aa		18.95	■□□□□ 0.62
FGFR2-222	ENST00000604236	CDC45	O75419	566 aa		18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	PA2G4	Q9UQ80	394 aa	Known RBP	18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	NDUFB9	Q9Y6M9	179 aa		18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	PNMA6E	A0A0J9YXQ4	647 aa		18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	HSPA2	P54652	639 aa		18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	KLHDC4	Q8TBB5	520 aa		18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	ZC3H13	Q5T200	1668 aa	Known RBP	18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	FAM177B	A6PVY3	158 aa		18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	FLII	Q13045	1269 aa		18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	PROSER2	Q86WR7	435 aa	Predicted RBP	18.94	■□□□□ 0.62
FGFR2-222	ENST00000604236	MYO5B	Q9ULV0	1848 aa		18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	PRPF40A	O75400	957 aa	Known RBP	18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	TNPO1	Q92973	898 aa	Known RBP	18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	IQSEC2	Q5JU85	1478 aa		18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	PI4KAP2	A4QPH2	592 aa		18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	HMMR	O75330	724 aa		18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	CAVIN1	Q6NZI2	390 aa	Known RBP	18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	SMC5	Q8IY18	1101 aa		18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	PI4KAP1	Q8N8J0	262 aa		18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	SPG7	Q9UQ90	795 aa		18.93	■□□□□ 0.62
FGFR2-222	ENST00000604236	CWC27	Q6UX04	472 aa	Known RBP	18.92	■□□□□ 0.62
FGFR2-222	ENST00000604236	GOLGA6L22	H0YM25	854 aa		18.92	■□□□□ 0.62
FGFR2-222	ENST00000604236	C1orf141	Q5JVX7	400 aa		18.92	■□□□□ 0.62
FGFR2-222	ENST00000604236	TNR	Q92752	1358 aa		18.92	■□□□□ 0.62
FGFR2-222	ENST00000604236	GSPT1	P15170	499 aa	Known RBP	18.92	■□□□□ 0.62
FGFR2-222	ENST00000604236	STRN4	Q9NRL3	753 aa		18.92	■□□□□ 0.62
FGFR2-222	ENST00000604236	THEMIS	Q8N1K5	641 aa	Predicted RBP	18.91	■□□□□ 0.62
FGFR2-222	ENST00000604236	SYTL4	Q96C24	671 aa	Predicted RBP	18.91	■□□□□ 0.62
FGFR2-222	ENST00000604236	PTCD1	O75127	700 aa	Known RBP	18.91	■□□□□ 0.62
FGFR2-222	ENST00000604236	CHPF2	Q9P2E5	772 aa		18.91	■□□□□ 0.62
FGFR2-222	ENST00000604236	CWF19L2	Q2TBE0	894 aa	Known RBP	18.91	■□□□□ 0.62
FGFR2-222	ENST00000604236	GNAT3	A8MTJ3	354 aa		18.9	■□□□□ 0.62
FGFR2-222	ENST00000604236	PLEKHM2	Q8IWE5	1019 aa		18.9	■□□□□ 0.62
FGFR2-222	ENST00000604236	HDAC1	Q13547	482 aa	Predicted RBP	18.9	■□□□□ 0.62
FGFR2-222	ENST00000604236	RBM27	Q9P2N5	1060 aa	Known RBP	18.9	■□□□□ 0.62
FGFR2-222	ENST00000604236	GNAI2	P04899	355 aa		18.9	■□□□□ 0.62
FGFR2-222	ENST00000604236	PTPRM	P28827	1452 aa		18.89	■□□□□ 0.62
FGFR2-222	ENST00000604236	ALDH1L2	Q3SY69	923 aa		18.89	■□□□□ 0.61
FGFR2-222	ENST00000604236	MSH6	P52701	1360 aa		18.89	■□□□□ 0.61
FGFR2-222	ENST00000604236	BTBD11	A6QL63	1104 aa		18.89	■□□□□ 0.61
FGFR2-222	ENST00000604236	GCC1	Q96CN9	775 aa		18.89	■□□□□ 0.61
FGFR2-222	ENST00000604236	PHF8	Q9UPP1	1060 aa		18.89	■□□□□ 0.61
FGFR2-222	ENST00000604236	GOLGB1	Q14789	3259 aa	Known RBP	18.89	■□□□□ 0.61
FGFR2-222	ENST00000604236	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.88	■□□□□ 0.61
FGFR2-222	ENST00000604236	ATP5J2-PTCD1	G3V325	749 aa		18.88	■□□□□ 0.61
FGFR2-222	ENST00000604236	CEP85	Q6P2H3	762 aa		18.88	■□□□□ 0.61
FGFR2-222	ENST00000604236	ZFYVE9	O95405	1425 aa		18.88	■□□□□ 0.61
FGFR2-222	ENST00000604236	CHMP4B	Q9H444	224 aa	Known RBP	18.88	■□□□□ 0.61
FGFR2-222	ENST00000604236	NBPF6	Q5VWK0	638 aa		18.87	■□□□□ 0.61
FGFR2-222	ENST00000604236	ANP32B	Q92688	251 aa	Known RBP	18.87	■□□□□ 0.61
FGFR2-222	ENST00000604236	NBPF4	Q96M43	638 aa		18.87	■□□□□ 0.61
FGFR2-222	ENST00000604236	SRCAP	Q6ZRS2	3230 aa		18.87	■□□□□ 0.61
FGFR2-222	ENST00000604236	FGD1	P98174	961 aa		18.87	■□□□□ 0.61
FGFR2-222	ENST00000604236	AAMP	Q13685	434 aa		18.87	■□□□□ 0.61
FGFR2-222	ENST00000604236	GBP4	Q96PP9	640 aa		18.87	■□□□□ 0.61
FGFR2-222	ENST00000604236	RICTOR	Q6R327	1708 aa		18.86	■□□□□ 0.61
FGFR2-222	ENST00000604236	CCDC30	Q5VVM6	783 aa		18.86	■□□□□ 0.61
FGFR2-222	ENST00000604236	IL17RE	Q8NFR9	667 aa		18.86	■□□□□ 0.61
FGFR2-222	ENST00000604236	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.86	■□□□□ 0.61
FGFR2-222	ENST00000604236	CT47B1	P0C2W7	299 aa	Predicted RBP	18.86	■□□□□ 0.61
FGFR2-222	ENST00000604236	FBXW7	Q969H0	707 aa		18.86	■□□□□ 0.61
FGFR2-222	ENST00000604236	STK3	Q13188	491 aa		18.85	■□□□□ 0.61
FGFR2-222	ENST00000604236	INTS3	Q68E01	1043 aa	Known RBP	18.85	■□□□□ 0.61
FGFR2-222	ENST00000604236	KIAA1211	Q6ZU35	1233 aa		18.85	■□□□□ 0.61
FGFR2-222	ENST00000604236	PPP1R42	Q7Z4L9	355 aa		18.85	■□□□□ 0.61
FGFR2-222	ENST00000604236	RIC3	Q7Z5B4	369 aa		18.85	■□□□□ 0.61
FGFR2-222	ENST00000604236	PREX1	Q8TCU6	1659 aa		18.85	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms