RNA–Protein interactions for RNA: ENST00000603669.5

GRAMD1A-213, Transcript of GRAM domain containing 1A, humanhuman

TSL 5

Gene GRAMD1A, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-213ENST00000603669 HOXC9P31274 260 aa21.51■■□□□ 1.03
GRAMD1A-213ENST00000603669 AMPHP49418 695 aa21.51■■□□□ 1.03
GRAMD1A-213ENST00000603669 MSH5O43196 834 aa21.5■■□□□ 1.03
GRAMD1A-213ENST00000603669 GIGYF1O75420 1035 aaPredicted RBP21.5■■□□□ 1.03
GRAMD1A-213ENST00000603669 COG3Q96JB2 828 aa21.5■■□□□ 1.03
GRAMD1A-213ENST00000603669 PUS7Q96PZ0 661 aaKnown RBP21.5■■□□□ 1.03
GRAMD1A-213ENST00000603669 CCNL1Q9UK58 526 aaPredicted RBP21.5■■□□□ 1.03
GRAMD1A-213ENST00000603669 NSD2O96028 1365 aa21.49■■□□□ 1.03
GRAMD1A-213ENST00000603669 COL23A1Q86Y22 540 aaPredicted RBP21.49■■□□□ 1.03
GRAMD1A-213ENST00000603669 YBX3P16989 372 aaKnown RBP eCLIP21.48■■□□□ 1.034e-6■□□□□ 8.3
GRAMD1A-213ENST00000603669 NBPF6Q5VWK0 638 aa21.46■■□□□ 1.03
GRAMD1A-213ENST00000603669 NBPF4Q96M43 638 aa21.46■■□□□ 1.03
GRAMD1A-213ENST00000603669 RRS1Q15050 365 aaKnown RBP21.45■■□□□ 1.02
GRAMD1A-213ENST00000603669 MSL1Q68DK7 614 aa21.45■■□□□ 1.02
GRAMD1A-213ENST00000603669 USHBP1Q8N6Y0 703 aa21.45■■□□□ 1.02
GRAMD1A-213ENST00000603669 TESK2Q96S53 571 aa21.45■■□□□ 1.02
GRAMD1A-213ENST00000603669 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
GRAMD1A-213ENST00000603669 GRIN3BO60391 1043 aa21.44■■□□□ 1.02
GRAMD1A-213ENST00000603669 MEGF6O75095 1541 aa21.44■■□□□ 1.02
GRAMD1A-213ENST00000603669 USP47Q96K76 1375 aa21.43■■□□□ 1.02
GRAMD1A-213ENST00000603669 COL24A1Q17RW2 1714 aa21.42■■□□□ 1.02
GRAMD1A-213ENST00000603669 QSER1Q2KHR3 1735 aa21.42■■□□□ 1.02
GRAMD1A-213ENST00000603669 TUBGCP6Q96RT7 1819 aa21.41■■□□□ 1.02
GRAMD1A-213ENST00000603669 CEP350Q5VT06 3117 aa21.4■■□□□ 1.02
GRAMD1A-213ENST00000603669 DOT1LQ8TEK3 1739 aa21.4■■□□□ 1.02
GRAMD1A-213ENST00000603669 FYB1O15117 783 aa21.39■■□□□ 1.01
GRAMD1A-213ENST00000603669 RAPGEF4Q8WZA2 1011 aa21.39■■□□□ 1.01
GRAMD1A-213ENST00000603669 GGNBP2Q9H3C7 697 aa21.39■■□□□ 1.01
GRAMD1A-213ENST00000603669 FAM208AQ9UK61 1670 aaKnown RBP21.39■■□□□ 1.01
GRAMD1A-213ENST00000603669 RGPD2P0DJD1 1756 aa21.38■■□□□ 1.01
GRAMD1A-213ENST00000603669 LY75O60449 1722 aa21.38■■□□□ 1.01
GRAMD1A-213ENST00000603669 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
GRAMD1A-213ENST00000603669 MPRIPQ6WCQ1 1025 aa21.37■■□□□ 1.01
GRAMD1A-213ENST00000603669 SHANK3Q9BYB0 1731 aa21.37■■□□□ 1.01
GRAMD1A-213ENST00000603669 CGNL1Q0VF96 1302 aa21.36■■□□□ 1.01
GRAMD1A-213ENST00000603669 TATP17735 454 aaPredicted RBP21.36■■□□□ 1.01
GRAMD1A-213ENST00000603669 HSP90AB2PQ58FF8 381 aa21.36■■□□□ 1.01
GRAMD1A-213ENST00000603669 CD2APQ9Y5K6 639 aa21.35■■□□□ 1.01
GRAMD1A-213ENST00000603669 SMIM5Q71RC9 77 aa21.34■■□□□ 1.01
GRAMD1A-213ENST00000603669 AMIGO3Q86WK7 504 aa21.33■■□□□ 1.01
GRAMD1A-213ENST00000603669 FLAD1Q8NFF5 587 aa21.33■■□□□ 1.01
GRAMD1A-213ENST00000603669 RTL1A6NKG5 1358 aa21.33■■□□□ 1
GRAMD1A-213ENST00000603669 ATP10DQ9P241 1426 aa21.32■■□□□ 1
GRAMD1A-213ENST00000603669 CYP27B1O15528 508 aa21.32■■□□□ 1
GRAMD1A-213ENST00000603669 PALLDQ8WX93 1383 aa21.32■■□□□ 1
GRAMD1A-213ENST00000603669 PCDH11XQ9BZA7 1347 aa21.31■■□□□ 1
GRAMD1A-213ENST00000603669 PCDH11YQ9BZA8 1340 aa21.31■■□□□ 1
GRAMD1A-213ENST00000603669 SLC24A1O60721 1099 aa21.31■■□□□ 1
GRAMD1A-213ENST00000603669 IFFO2Q5TF58 517 aa21.31■■□□□ 1
GRAMD1A-213ENST00000603669 WWC3Q9ULE0 1092 aa21.31■■□□□ 1
GRAMD1A-213ENST00000603669 ZNF526Q8TF50 670 aaPredicted RBP21.3■■□□□ 1
GRAMD1A-213ENST00000603669 GPBP1L1Q9HC44 474 aaPredicted RBP21.3■■□□□ 1
GRAMD1A-213ENST00000603669 SMG6Q86US8 1419 aaKnown RBP21.29■■□□□ 1
GRAMD1A-213ENST00000603669 INSRP06213 1382 aa21.29■■□□□ 1
GRAMD1A-213ENST00000603669 PHF14O94880 888 aa21.28■■□□□ 1
GRAMD1A-213ENST00000603669 PIGBQ92521 554 aa21.28■■□□□ 1
GRAMD1A-213ENST00000603669 AK7Q96M32 723 aa21.28■■□□□ 1
GRAMD1A-213ENST00000603669 HMGB2P26583 209 aaKnown RBP21.27■■□□□ 1
GRAMD1A-213ENST00000603669 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
GRAMD1A-213ENST00000603669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.26■□□□□ 0.99
GRAMD1A-213ENST00000603669 TMF1P82094 1093 aa21.26■□□□□ 0.99
GRAMD1A-213ENST00000603669 EMILIN1Q9Y6C2 1016 aa21.25■□□□□ 0.99
GRAMD1A-213ENST00000603669 C5P01031 1676 aa21.24■□□□□ 0.99
GRAMD1A-213ENST00000603669 IGSF1Q8N6C5 1336 aa21.24■□□□□ 0.99
GRAMD1A-213ENST00000603669 FLT4P35916 1363 aa21.23■□□□□ 0.99
GRAMD1A-213ENST00000603669 CARD14Q9BXL6 1004 aa21.23■□□□□ 0.99
GRAMD1A-213ENST00000603669 PPM1GO15355 546 aaPredicted RBP21.22■□□□□ 0.99
GRAMD1A-213ENST00000603669 NKX1-1Q15270 411 aaPredicted RBP21.22■□□□□ 0.99
GRAMD1A-213ENST00000603669 LINC00116Q8NCU8 138 aa21.22■□□□□ 0.99
GRAMD1A-213ENST00000603669 ADCY9O60503 1353 aa21.22■□□□□ 0.99
GRAMD1A-213ENST00000603669 LOC102724428A0A0B4J2F2 783 aa21.21■□□□□ 0.99
GRAMD1A-213ENST00000603669 SIK1P57059 783 aa21.21■□□□□ 0.99
GRAMD1A-213ENST00000603669 HSPA6P17066 643 aa21.2■□□□□ 0.98
GRAMD1A-213ENST00000603669 KIF24Q5T7B8 1368 aa21.2■□□□□ 0.98
GRAMD1A-213ENST00000603669 TAF1LQ8IZX4 1826 aa21.2■□□□□ 0.98
GRAMD1A-213ENST00000603669 C4BP0C0L5 1744 aa21.19■□□□□ 0.98
GRAMD1A-213ENST00000603669 SSFA2P28290 1259 aa21.19■□□□□ 0.98
GRAMD1A-213ENST00000603669 ASAP1Q9ULH1 1129 aa21.19■□□□□ 0.98
GRAMD1A-213ENST00000603669 SPG7Q9UQ90 795 aa21.19■□□□□ 0.98
GRAMD1A-213ENST00000603669 ITPK1Q13572 414 aa21.18■□□□□ 0.98
GRAMD1A-213ENST00000603669 GNPATO15228 680 aa21.17■□□□□ 0.98
GRAMD1A-213ENST00000603669 EYA1Q99502 592 aa21.17■□□□□ 0.98
GRAMD1A-213ENST00000603669 TMOD3Q9NYL9 352 aa21.17■□□□□ 0.98
GRAMD1A-213ENST00000603669 TOGARAM1Q9Y4F4 1720 aa21.16■□□□□ 0.98
GRAMD1A-213ENST00000603669 ATP6V1AP38606 617 aa21.16■□□□□ 0.98
GRAMD1A-213ENST00000603669 CDCA8Q53HL2 280 aa21.15■□□□□ 0.98
GRAMD1A-213ENST00000603669 ITGB4P16144 1822 aa21.15■□□□□ 0.98
GRAMD1A-213ENST00000603669 KIF3CO14782 793 aa21.14■□□□□ 0.97
GRAMD1A-213ENST00000603669 MMP10P09238 476 aa21.14■□□□□ 0.97
GRAMD1A-213ENST00000603669 NSD3Q9BZ95 1437 aa21.13■□□□□ 0.97
GRAMD1A-213ENST00000603669 WASHC2AQ641Q2 1341 aa21.13■□□□□ 0.97
GRAMD1A-213ENST00000603669 ATG3Q9NT62 314 aa21.13■□□□□ 0.97
GRAMD1A-213ENST00000603669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.13■□□□□ 0.97
GRAMD1A-213ENST00000603669 UBR3Q6ZT12 1888 aa21.13■□□□□ 0.97
GRAMD1A-213ENST00000603669 PHKG2P15735 406 aa21.12■□□□□ 0.97
GRAMD1A-213ENST00000603669 IFNL2Q8IZJ0 200 aa21.12■□□□□ 0.97
GRAMD1A-213ENST00000603669 NCAPD2Q15021 1401 aa21.11■□□□□ 0.97
GRAMD1A-213ENST00000603669 A0A0G2JLW4 131 aa21.1■□□□□ 0.97
GRAMD1A-213ENST00000603669 POLKQ9UBT6 870 aa21.1■□□□□ 0.97
GRAMD1A-213ENST00000603669 MAP2P11137 1827 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms