RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 RGPD3A6NKT7 1758 aaPredicted RBP12.7□□□□□ -0.38
SQSTM1P1-201ENST00000603451 RGPD4Q7Z3J3 1758 aa12.7□□□□□ -0.38
SQSTM1P1-201ENST00000603451 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
SQSTM1P1-201ENST00000603451 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
SQSTM1P1-201ENST00000603451 CNGB1Q14028 1251 aaPredicted RBP12.69□□□□□ -0.38
SQSTM1P1-201ENST00000603451 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
SQSTM1P1-201ENST00000603451 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
SQSTM1P1-201ENST00000603451 SPG7Q9UQ90 795 aa12.68□□□□□ -0.38
SQSTM1P1-201ENST00000603451 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
SQSTM1P1-201ENST00000603451 FAM196AQ6ZSG2 479 aa12.67□□□□□ -0.38
SQSTM1P1-201ENST00000603451 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
SQSTM1P1-201ENST00000603451 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
SQSTM1P1-201ENST00000603451 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
SQSTM1P1-201ENST00000603451 FCHSD2O94868 740 aa12.66□□□□□ -0.38
SQSTM1P1-201ENST00000603451 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
SQSTM1P1-201ENST00000603451 CCDC125Q86Z20 511 aa12.66□□□□□ -0.38
SQSTM1P1-201ENST00000603451 USHBP1Q8N6Y0 703 aa12.66□□□□□ -0.38
SQSTM1P1-201ENST00000603451 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
SQSTM1P1-201ENST00000603451 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
SQSTM1P1-201ENST00000603451 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
SQSTM1P1-201ENST00000603451 PLEKHO1Q53GL0 409 aaPredicted RBP12.64□□□□□ -0.39
SQSTM1P1-201ENST00000603451 VIRMAQ69YN4 1812 aaKnown RBP12.64□□□□□ -0.39
SQSTM1P1-201ENST00000603451 SCN11AQ9UI33 1791 aa12.64□□□□□ -0.39
SQSTM1P1-201ENST00000603451 EP400Q96L91 3159 aa12.63□□□□□ -0.39
SQSTM1P1-201ENST00000603451 TOGARAM1Q9Y4F4 1720 aa12.63□□□□□ -0.39
SQSTM1P1-201ENST00000603451 NEFMP07197 916 aa12.63□□□□□ -0.39
SQSTM1P1-201ENST00000603451 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
SQSTM1P1-201ENST00000603451 U2AF1L5P0DN76 240 aaPredicted RBP12.63□□□□□ -0.39
SQSTM1P1-201ENST00000603451 U2AF1Q01081 240 aaKnown RBP eCLIP12.63□□□□□ -0.39
SQSTM1P1-201ENST00000603451 AEBP1Q8IUX7 1158 aa12.63□□□□□ -0.39
SQSTM1P1-201ENST00000603451 MARCH10Q8NA82 808 aaPredicted RBP12.63□□□□□ -0.39
SQSTM1P1-201ENST00000603451 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
SQSTM1P1-201ENST00000603451 MRC1P22897 1456 aa12.62□□□□□ -0.39
SQSTM1P1-201ENST00000603451 WDR43Q15061 677 aaKnown RBP eCLIP12.62□□□□□ -0.39
SQSTM1P1-201ENST00000603451 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
SQSTM1P1-201ENST00000603451 IFNL2Q8IZJ0 200 aa12.62□□□□□ -0.39
SQSTM1P1-201ENST00000603451 GAS2L2Q8NHY3 880 aa12.62□□□□□ -0.39
SQSTM1P1-201ENST00000603451 ITGB4P16144 1822 aa12.61□□□□□ -0.39
SQSTM1P1-201ENST00000603451 BTAF1O14981 1849 aa12.6□□□□□ -0.39
SQSTM1P1-201ENST00000603451 CCER2I3L3R5 266 aa12.6□□□□□ -0.39
SQSTM1P1-201ENST00000603451 CYP27B1O15528 508 aa12.6□□□□□ -0.39
SQSTM1P1-201ENST00000603451 HMOX1P09601 288 aa12.6□□□□□ -0.39
SQSTM1P1-201ENST00000603451 PHKG2P15735 406 aa12.6□□□□□ -0.39
SQSTM1P1-201ENST00000603451 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
SQSTM1P1-201ENST00000603451 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
SQSTM1P1-201ENST00000603451 MAP3K5Q99683 1374 aa12.59□□□□□ -0.39
SQSTM1P1-201ENST00000603451 DLG5Q8TDM6 1919 aa12.59□□□□□ -0.39
SQSTM1P1-201ENST00000603451 SOCS7O14512 581 aa12.59□□□□□ -0.39
SQSTM1P1-201ENST00000603451 PRKAR2BP31323 418 aa12.59□□□□□ -0.39
SQSTM1P1-201ENST00000603451 AKAP4Q5JQC9 854 aa12.59□□□□□ -0.39
SQSTM1P1-201ENST00000603451 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
SQSTM1P1-201ENST00000603451 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
SQSTM1P1-201ENST00000603451 MAPK8IP3Q9UPT6 1336 aa12.59□□□□□ -0.39
SQSTM1P1-201ENST00000603451 ZNF831Q5JPB2 1677 aa12.58□□□□□ -0.4
SQSTM1P1-201ENST00000603451 RREB1Q92766 1687 aa12.58□□□□□ -0.4
SQSTM1P1-201ENST00000603451 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
SQSTM1P1-201ENST00000603451 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
SQSTM1P1-201ENST00000603451 MRS2Q9HD23 443 aa12.58□□□□□ -0.4
SQSTM1P1-201ENST00000603451 SIPA1L3O60292 1781 aaPredicted RBP12.58□□□□□ -0.4
SQSTM1P1-201ENST00000603451 CICQ96RK0 1608 aaPredicted RBP12.58□□□□□ -0.4
SQSTM1P1-201ENST00000603451 LY75O60449 1722 aa12.57□□□□□ -0.4
SQSTM1P1-201ENST00000603451 KDM6AO15550 1401 aaPredicted RBP12.57□□□□□ -0.4
SQSTM1P1-201ENST00000603451 HTATSF1O43719 755 aaKnown RBP12.57□□□□□ -0.4
SQSTM1P1-201ENST00000603451 SF3B2Q13435 895 aaKnown RBP12.57□□□□□ -0.4
SQSTM1P1-201ENST00000603451 PLEKHF1Q96S99 279 aa12.57□□□□□ -0.4
SQSTM1P1-201ENST00000603451 PAPPAQ13219 1627 aa12.57□□□□□ -0.4
SQSTM1P1-201ENST00000603451 ERVV-2B6SEH9 535 aa12.56□□□□□ -0.4
SQSTM1P1-201ENST00000603451 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
SQSTM1P1-201ENST00000603451 UPF1Q92900 1129 aaKnown RBP eCLIP12.56□□□□□ -0.4
SQSTM1P1-201ENST00000603451 BAG6P46379 1132 aa12.55□□□□□ -0.4
SQSTM1P1-201ENST00000603451 MTHFSDQ2M296 383 aaKnown RBP12.55□□□□□ -0.4
SQSTM1P1-201ENST00000603451 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
SQSTM1P1-201ENST00000603451 PNISRQ8TF01 805 aaKnown RBP12.55□□□□□ -0.4
SQSTM1P1-201ENST00000603451 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
SQSTM1P1-201ENST00000603451 CEMIPQ8WUJ3 1361 aa12.55□□□□□ -0.4
SQSTM1P1-201ENST00000603451 GNAT3A8MTJ3 354 aa12.54□□□□□ -0.4
SQSTM1P1-201ENST00000603451 PLSCR1O15162 318 aa12.54□□□□□ -0.4
SQSTM1P1-201ENST00000603451 LMOD3Q0VAK6 560 aa12.54□□□□□ -0.4
SQSTM1P1-201ENST00000603451 FAM182BQ5T319 152 aa12.54□□□□□ -0.4
SQSTM1P1-201ENST00000603451 KAT6BQ8WYB5 2073 aa12.53□□□□□ -0.4
SQSTM1P1-201ENST00000603451 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
SQSTM1P1-201ENST00000603451 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
SQSTM1P1-201ENST00000603451 NGEFQ8N5V2 710 aa12.53□□□□□ -0.4
SQSTM1P1-201ENST00000603451 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
SQSTM1P1-201ENST00000603451 ADAMTS8Q9UP79 889 aa12.53□□□□□ -0.4
SQSTM1P1-201ENST00000603451 NUP188Q5SRE5 1749 aa12.53□□□□□ -0.4
SQSTM1P1-201ENST00000603451 TRIM37O94972 964 aa12.52□□□□□ -0.41
SQSTM1P1-201ENST00000603451 RTF1Q92541 710 aaKnown RBP12.52□□□□□ -0.41
SQSTM1P1-201ENST00000603451 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
SQSTM1P1-201ENST00000603451 TMOD3Q9NYL9 352 aa12.51□□□□□ -0.41
SQSTM1P1-201ENST00000603451 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
SQSTM1P1-201ENST00000603451 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
SQSTM1P1-201ENST00000603451 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
SQSTM1P1-201ENST00000603451 SLC52A2Q9HAB3 445 aa12.5□□□□□ -0.41
SQSTM1P1-201ENST00000603451 KDM3BQ7LBC6 1761 aa12.5□□□□□ -0.41
SQSTM1P1-201ENST00000603451 TAF1LQ8IZX4 1826 aa12.49□□□□□ -0.41
SQSTM1P1-201ENST00000603451 C5P01031 1676 aa12.49□□□□□ -0.41
SQSTM1P1-201ENST00000603451 APBA3O96018 575 aa12.49□□□□□ -0.41
SQSTM1P1-201ENST00000603451 TMPOP42166 694 aaKnown RBP12.49□□□□□ -0.41
SQSTM1P1-201ENST00000603451 TEFQ10587 303 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms