RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 HSP90AB2PQ58FF8 381 aa29.46■■■□□ 2.31
PPFIA3-209ENST00000602783 MEGF6O75095 1541 aa29.45■■■□□ 2.31
PPFIA3-209ENST00000602783 DCAF8L1A6NGE4 600 aa29.45■■■□□ 2.31
PPFIA3-209ENST00000602783 MTFR1LQ9H019 292 aa29.44■■■□□ 2.3
PPFIA3-209ENST00000602783 SMG6Q86US8 1419 aaKnown RBP29.44■■■□□ 2.3
PPFIA3-209ENST00000602783 ZNF827Q17R98 1081 aa29.43■■■□□ 2.3
PPFIA3-209ENST00000602783 RAPGEF4Q8WZA2 1011 aa29.43■■■□□ 2.3
PPFIA3-209ENST00000602783 INSRP06213 1382 aa29.41■■■□□ 2.3
PPFIA3-209ENST00000602783 SLC27A3Q5K4L6 730 aa29.41■■■□□ 2.3
PPFIA3-209ENST00000602783 NSD3Q9BZ95 1437 aa29.41■■■□□ 2.3
PPFIA3-209ENST00000602783 CGNL1Q0VF96 1302 aa29.41■■■□□ 2.3
PPFIA3-209ENST00000602783 TATP17735 454 aaPredicted RBP29.4■■■□□ 2.3
PPFIA3-209ENST00000602783 PAPPAQ13219 1627 aa29.4■■■□□ 2.3
PPFIA3-209ENST00000602783 FLT4P35916 1363 aa29.39■■■□□ 2.3
PPFIA3-209ENST00000602783 KCNQ4P56696 695 aa29.38■■■□□ 2.29
PPFIA3-209ENST00000602783 EMILIN1Q9Y6C2 1016 aa29.38■■■□□ 2.29
PPFIA3-209ENST00000602783 KIF24Q5T7B8 1368 aa29.38■■■□□ 2.29
PPFIA3-209ENST00000602783 YY1P25490 414 aa29.37■■■□□ 2.29
PPFIA3-209ENST00000602783 AKT1S1Q96B36 256 aa29.37■■■□□ 2.29
PPFIA3-209ENST00000602783 SGIP1Q9BQI5 828 aa29.37■■■□□ 2.29
PPFIA3-209ENST00000602783 POLR3GLQ9BT43 218 aa29.37■■■□□ 2.29
PPFIA3-209ENST00000602783 SHANK3Q9BYB0 1731 aa29.36■■■□□ 2.29
PPFIA3-209ENST00000602783 FHDC1Q9C0D6 1143 aaPredicted RBP29.35■■■□□ 2.29
PPFIA3-209ENST00000602783 NSD2O96028 1365 aa29.35■■■□□ 2.29
PPFIA3-209ENST00000602783 DOT1LQ8TEK3 1739 aa29.34■■■□□ 2.29
PPFIA3-209ENST00000602783 PPM1GO15355 546 aaPredicted RBP29.34■■■□□ 2.29
PPFIA3-209ENST00000602783 SYT17Q9BSW7 474 aa29.34■■■□□ 2.29
PPFIA3-209ENST00000602783 ARXQ96QS3 562 aa29.31■■■□□ 2.28
PPFIA3-209ENST00000602783 TFCP2L1Q9NZI6 479 aa29.31■■■□□ 2.28
PPFIA3-209ENST00000602783 PCDH11XQ9BZA7 1347 aa29.3■■■□□ 2.28
PPFIA3-209ENST00000602783 PCDH11YQ9BZA8 1340 aa29.3■■■□□ 2.28
PPFIA3-209ENST00000602783 EIF4G2P78344 907 aaKnown RBP eCLIP29.3■■■□□ 2.28
PPFIA3-209ENST00000602783 CCNL1Q9UK58 526 aaPredicted RBP29.3■■■□□ 2.28
PPFIA3-209ENST00000602783 ANKRD26Q9UPS8 1709 aa29.29■■■□□ 2.28
PPFIA3-209ENST00000602783 HSPA5P11021 654 aaKnown RBP29.29■■■□□ 2.28
PPFIA3-209ENST00000602783 PNPLA7Q6ZV29 1317 aa29.28■■■□□ 2.28
PPFIA3-209ENST00000602783 SLC16A10Q8TF71 515 aa29.28■■■□□ 2.28
PPFIA3-209ENST00000602783 WASHC2AQ641Q2 1341 aa29.26■■■□□ 2.27
PPFIA3-209ENST00000602783 CYP27B1O15528 508 aa29.26■■■□□ 2.27
PPFIA3-209ENST00000602783 LY75O60449 1722 aa29.25■■■□□ 2.27
PPFIA3-209ENST00000602783 POLKQ9UBT6 870 aa29.24■■■□□ 2.27
PPFIA3-209ENST00000602783 MPRIPQ6WCQ1 1025 aa29.23■■■□□ 2.27
PPFIA3-209ENST00000602783 EYA1Q99502 592 aa29.22■■■□□ 2.27
PPFIA3-209ENST00000602783 MAP2P11137 1827 aaKnown RBP29.22■■■□□ 2.27
PPFIA3-209ENST00000602783 POLD1P28340 1107 aa29.21■■■□□ 2.27
PPFIA3-209ENST00000602783 TNNT2P45379 298 aaPredicted RBP29.21■■■□□ 2.27
PPFIA3-209ENST00000602783 QSER1Q2KHR3 1735 aa29.2■■■□□ 2.27
PPFIA3-209ENST00000602783 SPG7Q9UQ90 795 aa29.19■■■□□ 2.26
PPFIA3-209ENST00000602783 MSH5O43196 834 aa29.18■■■□□ 2.26
PPFIA3-209ENST00000602783 PANK3Q9H999 370 aa29.18■■■□□ 2.26
PPFIA3-209ENST00000602783 NCAPD2Q15021 1401 aa29.18■■■□□ 2.26
PPFIA3-209ENST00000602783 MAP3K5Q99683 1374 aa29.17■■■□□ 2.26
PPFIA3-209ENST00000602783 KLHL34Q8N239 644 aa29.17■■■□□ 2.26
PPFIA3-209ENST00000602783 TUBGCP6Q96RT7 1819 aa29.17■■■□□ 2.26
PPFIA3-209ENST00000602783 PALLDQ8WX93 1383 aa29.16■■■□□ 2.26
PPFIA3-209ENST00000602783 COL23A1Q86Y22 540 aaPredicted RBP29.16■■■□□ 2.26
PPFIA3-209ENST00000602783 NKX1-1Q15270 411 aaPredicted RBP29.15■■■□□ 2.26
PPFIA3-209ENST00000602783 EIF4A2Q14240 407 aaKnown RBP29.13■■■□□ 2.25
PPFIA3-209ENST00000602783 PIGBQ92521 554 aa29.13■■■□□ 2.25
PPFIA3-209ENST00000602783 SMARCC1Q92922 1105 aaPredicted RBP29.13■■■□□ 2.25
PPFIA3-209ENST00000602783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.13■■■□□ 2.25
PPFIA3-209ENST00000602783 PKD1L3Q7Z443 1732 aa29.13■■■□□ 2.25
PPFIA3-209ENST00000602783 HMGB2P26583 209 aaKnown RBP29.12■■■□□ 2.25
PPFIA3-209ENST00000602783 UTRNP46939 3433 aa29.1■■■□□ 2.25
PPFIA3-209ENST00000602783 TOGARAM1Q9Y4F4 1720 aa29.09■■■□□ 2.25
PPFIA3-209ENST00000602783 ITGB4P16144 1822 aa29.09■■■□□ 2.25
PPFIA3-209ENST00000602783 IFNL2Q8IZJ0 200 aa29.09■■■□□ 2.25
PPFIA3-209ENST00000602783 COL24A1Q17RW2 1714 aa29.08■■■□□ 2.25
PPFIA3-209ENST00000602783 GPR162Q16538 588 aa29.08■■■□□ 2.25
PPFIA3-209ENST00000602783 PHKG2P15735 406 aa29.07■■■□□ 2.24
PPFIA3-209ENST00000602783 MSL1Q68DK7 614 aa29.07■■■□□ 2.24
PPFIA3-209ENST00000602783 FLAD1Q8NFF5 587 aa29.07■■■□□ 2.24
PPFIA3-209ENST00000602783 C5P01031 1676 aa29.06■■■□□ 2.24
PPFIA3-209ENST00000602783 TMOD3Q9NYL9 352 aa29.06■■■□□ 2.24
PPFIA3-209ENST00000602783 MORC1Q86VD1 984 aa29.04■■■□□ 2.24
PPFIA3-209ENST00000602783 AK7Q96M32 723 aa29.04■■■□□ 2.24
PPFIA3-209ENST00000602783 PELP1Q8IZL8 1130 aaKnown RBP29.03■■■□□ 2.24
PPFIA3-209ENST00000602783 NLGN2Q8NFZ4 835 aa29.03■■■□□ 2.24
PPFIA3-209ENST00000602783 TAF1LQ8IZX4 1826 aa29.03■■■□□ 2.24
PPFIA3-209ENST00000602783 IGSF1Q8N6C5 1336 aa29.02■■■□□ 2.24
PPFIA3-209ENST00000602783 ASAP1Q9ULH1 1129 aa29.02■■■□□ 2.24
PPFIA3-209ENST00000602783 LOC102724428A0A0B4J2F2 783 aa29.01■■■□□ 2.23
PPFIA3-209ENST00000602783 SIK1P57059 783 aa29.01■■■□□ 2.23
PPFIA3-209ENST00000602783 ZNF784Q8NCA9 323 aaPredicted RBP29.01■■■□□ 2.23
PPFIA3-209ENST00000602783 KNSTRNQ9Y448 316 aa29■■■□□ 2.23
PPFIA3-209ENST00000602783 AMIGO3Q86WK7 504 aa28.99■■■□□ 2.23
PPFIA3-209ENST00000602783 CHD4Q14839 1912 aa28.98■■■□□ 2.23
PPFIA3-209ENST00000602783 C4BP0C0L5 1744 aa28.98■■■□□ 2.23
PPFIA3-209ENST00000602783 PHF14O94880 888 aa28.98■■■□□ 2.23
PPFIA3-209ENST00000602783 SMIM5Q71RC9 77 aa28.98■■■□□ 2.23
PPFIA3-209ENST00000602783 KIF7Q2M1P5 1343 aa28.97■■■□□ 2.23
PPFIA3-209ENST00000602783 PLEKHO1Q53GL0 409 aaPredicted RBP28.97■■■□□ 2.23
PPFIA3-209ENST00000602783 LINC00116Q8NCU8 138 aa28.97■■■□□ 2.23
PPFIA3-209ENST00000602783 ATG3Q9NT62 314 aa28.97■■■□□ 2.23
PPFIA3-209ENST00000602783 ATP6V1AP38606 617 aa28.96■■■□□ 2.23
PPFIA3-209ENST00000602783 PLEKHG2Q9H7P9 1386 aa28.96■■■□□ 2.23
PPFIA3-209ENST00000602783 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.95■■■□□ 2.22
PPFIA3-209ENST00000602783 ITPK1Q13572 414 aa28.94■■■□□ 2.22
PPFIA3-209ENST00000602783 ERVV-2B6SEH9 535 aa28.93■■■□□ 2.22
PPFIA3-209ENST00000602783 HSP90AB1P08238 724 aaKnown RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms