RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 MSH5O43196 834 aa20.2■□□□□ 0.82
HCG18-245ENST00000602550 YBX3P16989 372 aaKnown RBP eCLIP20.2■□□□□ 0.82
HCG18-245ENST00000602550 LTV1Q96GA3 475 aaPredicted RBP20.2■□□□□ 0.82
HCG18-245ENST00000602550 SLC12A5Q9H2X9 1139 aa20.2■□□□□ 0.82
HCG18-245ENST00000602550 CCNL1Q9UK58 526 aaPredicted RBP20.2■□□□□ 0.82
HCG18-245ENST00000602550 LY75O60449 1722 aa20.19■□□□□ 0.82
HCG18-245ENST00000602550 ZCRB1Q8TBF4 217 aaKnown RBP20.18■□□□□ 0.82
HCG18-245ENST00000602550 CEP350Q5VT06 3117 aa20.18■□□□□ 0.82
HCG18-245ENST00000602550 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
HCG18-245ENST00000602550 SIN3AQ96ST3 1273 aa20.17■□□□□ 0.82
HCG18-245ENST00000602550 PUS7Q96PZ0 661 aaKnown RBP20.16■□□□□ 0.82
HCG18-245ENST00000602550 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
HCG18-245ENST00000602550 NEUROD1Q13562 356 aa20.15■□□□□ 0.82
HCG18-245ENST00000602550 GPBP1L1Q9HC44 474 aaPredicted RBP20.15■□□□□ 0.82
HCG18-245ENST00000602550 CD2APQ9Y5K6 639 aa20.15■□□□□ 0.82
HCG18-245ENST00000602550 NSD2O96028 1365 aa20.15■□□□□ 0.82
HCG18-245ENST00000602550 USP47Q96K76 1375 aa20.15■□□□□ 0.82
HCG18-245ENST00000602550 ATP10DQ9P241 1426 aa20.14■□□□□ 0.81
HCG18-245ENST00000602550 AMPHP49418 695 aa20.14■□□□□ 0.81
HCG18-245ENST00000602550 FLAD1Q8NFF5 587 aa20.14■□□□□ 0.81
HCG18-245ENST00000602550 A0A1W2PP64 1363 aa20.13■□□□□ 0.81
HCG18-245ENST00000602550 HOXC9P31274 260 aa20.13■□□□□ 0.81
HCG18-245ENST00000602550 COG3Q96JB2 828 aa20.13■□□□□ 0.81
HCG18-245ENST00000602550 CARD11Q9BXL7 1154 aa20.13■□□□□ 0.81
HCG18-245ENST00000602550 CGNL1Q0VF96 1302 aa20.11■□□□□ 0.81
HCG18-245ENST00000602550 MAP3K19Q56UN5 1328 aa20.11■□□□□ 0.81
HCG18-245ENST00000602550 MSL1Q68DK7 614 aa20.11■□□□□ 0.81
HCG18-245ENST00000602550 HSPA6P17066 643 aa20.1■□□□□ 0.81
HCG18-245ENST00000602550 RGPD2P0DJD1 1756 aa20.08■□□□□ 0.8
HCG18-245ENST00000602550 MEGF6O75095 1541 aa20.07■□□□□ 0.8
HCG18-245ENST00000602550 RAPGEF4Q8WZA2 1011 aa20.07■□□□□ 0.8
HCG18-245ENST00000602550 NBPF6Q5VWK0 638 aa20.05■□□□□ 0.8
HCG18-245ENST00000602550 NBPF4Q96M43 638 aa20.05■□□□□ 0.8
HCG18-245ENST00000602550 C5P01031 1676 aa20.05■□□□□ 0.8
HCG18-245ENST00000602550 ADCY9O60503 1353 aa20.05■□□□□ 0.8
HCG18-245ENST00000602550 SLC24A1O60721 1099 aa20.04■□□□□ 0.8
HCG18-245ENST00000602550 TATP17735 454 aaPredicted RBP20.04■□□□□ 0.8
HCG18-245ENST00000602550 FBLN1P23142 703 aa20.04■□□□□ 0.8
HCG18-245ENST00000602550 ZNF526Q8TF50 670 aaPredicted RBP20.04■□□□□ 0.8
HCG18-245ENST00000602550 RTL1A6NKG5 1358 aa20.04■□□□□ 0.8
HCG18-245ENST00000602550 TAF1LQ8IZX4 1826 aa20.03■□□□□ 0.8
HCG18-245ENST00000602550 SMARCC1Q92922 1105 aaPredicted RBP20.02■□□□□ 0.8
HCG18-245ENST00000602550 PALLDQ8WX93 1383 aa20.02■□□□□ 0.8
HCG18-245ENST00000602550 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.79
HCG18-245ENST00000602550 PCDH11XQ9BZA7 1347 aa20.02■□□□□ 0.79
HCG18-245ENST00000602550 PCDH11YQ9BZA8 1340 aa20.02■□□□□ 0.79
HCG18-245ENST00000602550 MPRIPQ6WCQ1 1025 aa20.01■□□□□ 0.79
HCG18-245ENST00000602550 AK7Q96M32 723 aa20.01■□□□□ 0.79
HCG18-245ENST00000602550 USHBP1Q8N6Y0 703 aa20■□□□□ 0.79
HCG18-245ENST00000602550 IGSF1Q8N6C5 1336 aa20■□□□□ 0.79
HCG18-245ENST00000602550 RRS1Q15050 365 aaKnown RBP19.99■□□□□ 0.79
HCG18-245ENST00000602550 NSD3Q9BZ95 1437 aa19.99■□□□□ 0.79
HCG18-245ENST00000602550 C4BP0C0L5 1744 aa19.96■□□□□ 0.79
HCG18-245ENST00000602550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.95■□□□□ 0.78
HCG18-245ENST00000602550 KIF3CO14782 793 aa19.95■□□□□ 0.78
HCG18-245ENST00000602550 FYB1O15117 783 aa19.95■□□□□ 0.78
HCG18-245ENST00000602550 SSFA2P28290 1259 aa19.95■□□□□ 0.78
HCG18-245ENST00000602550 TESK2Q96S53 571 aa19.95■□□□□ 0.78
HCG18-245ENST00000602550 INSRP06213 1382 aa19.95■□□□□ 0.78
HCG18-245ENST00000602550 UBR3Q6ZT12 1888 aa19.94■□□□□ 0.78
HCG18-245ENST00000602550 CYP27B1O15528 508 aa19.94■□□□□ 0.78
HCG18-245ENST00000602550 PHF14O94880 888 aa19.94■□□□□ 0.78
HCG18-245ENST00000602550 APLP1P51693 650 aa19.94■□□□□ 0.78
HCG18-245ENST00000602550 ITGB4P16144 1822 aa19.94■□□□□ 0.78
HCG18-245ENST00000602550 ST20-MTHFSA0A0A6YYL1 179 aa19.93■□□□□ 0.78
HCG18-245ENST00000602550 HSP90AB2PQ58FF8 381 aa19.93■□□□□ 0.78
HCG18-245ENST00000602550 GGNBP2Q9H3C7 697 aa19.93■□□□□ 0.78
HCG18-245ENST00000602550 WWC3Q9ULE0 1092 aa19.93■□□□□ 0.78
HCG18-245ENST00000602550 PIGBQ92521 554 aa19.92■□□□□ 0.78
HCG18-245ENST00000602550 KIF24Q5T7B8 1368 aa19.92■□□□□ 0.78
HCG18-245ENST00000602550 AMIGO3Q86WK7 504 aa19.91■□□□□ 0.78
HCG18-245ENST00000602550 FLT4P35916 1363 aa19.91■□□□□ 0.78
HCG18-245ENST00000602550 LOC102724428A0A0B4J2F2 783 aa19.9■□□□□ 0.78
HCG18-245ENST00000602550 SIK1P57059 783 aa19.9■□□□□ 0.78
HCG18-245ENST00000602550 NKX1-1Q15270 411 aaPredicted RBP19.9■□□□□ 0.78
HCG18-245ENST00000602550 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
HCG18-245ENST00000602550 TOGARAM1Q9Y4F4 1720 aa19.9■□□□□ 0.78
HCG18-245ENST00000602550 TOMM70O94826 608 aa19.89■□□□□ 0.77
HCG18-245ENST00000602550 SPG7Q9UQ90 795 aa19.89■□□□□ 0.77
HCG18-245ENST00000602550 TGFB2P61812 414 aa19.87■□□□□ 0.77
HCG18-245ENST00000602550 SMIM5Q71RC9 77 aa19.87■□□□□ 0.77
HCG18-245ENST00000602550 LINC00116Q8NCU8 138 aa19.87■□□□□ 0.77
HCG18-245ENST00000602550 MAP2P11137 1827 aaKnown RBP19.86■□□□□ 0.77
HCG18-245ENST00000602550 GNPATO15228 680 aa19.86■□□□□ 0.77
HCG18-245ENST00000602550 TMOD3Q9NYL9 352 aa19.86■□□□□ 0.77
HCG18-245ENST00000602550 CICQ96RK0 1608 aaPredicted RBP19.86■□□□□ 0.77
HCG18-245ENST00000602550 MMP10P09238 476 aa19.85■□□□□ 0.77
HCG18-245ENST00000602550 ATP6V1AP38606 617 aa19.85■□□□□ 0.77
HCG18-245ENST00000602550 TMF1P82094 1093 aa19.85■□□□□ 0.77
HCG18-245ENST00000602550 PKD1L3Q7Z443 1732 aa19.85■□□□□ 0.77
HCG18-245ENST00000602550 DNAJC5GQ8N7S2 189 aa19.84■□□□□ 0.77
HCG18-245ENST00000602550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.84■□□□□ 0.77
HCG18-245ENST00000602550 BCS1LQ9Y276 419 aa19.84■□□□□ 0.77
HCG18-245ENST00000602550 NLGN1Q8N2Q7 840 aa19.83■□□□□ 0.77
HCG18-245ENST00000602550 KIF13BQ9NQT8 1826 aa19.82■□□□□ 0.76
HCG18-245ENST00000602550 TRAPPC3LQ5T215 181 aa19.82■□□□□ 0.76
HCG18-245ENST00000602550 ASAP1Q9ULH1 1129 aa19.82■□□□□ 0.76
HCG18-245ENST00000602550 KIF20BQ96Q89 1820 aa19.81■□□□□ 0.76
HCG18-245ENST00000602550 PXDNLA1KZ92 1463 aa19.81■□□□□ 0.76
HCG18-245ENST00000602550 ITPK1Q13572 414 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms