RNA–Protein interactions for RNA: ENST00000602499.5

UBE2E3-207, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-207ENST00000602499 SULT6B1Q6IMI4 303 aa29.43■■■□□ 2.3
UBE2E3-207ENST00000602499 TNS2Q63HR2 1409 aa29.43■■■□□ 2.3
UBE2E3-207ENST00000602499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.42■■■□□ 2.3
UBE2E3-207ENST00000602499 ZCRB1Q8TBF4 217 aaKnown RBP29.4■■■□□ 2.3
UBE2E3-207ENST00000602499 EP400Q96L91 3159 aa29.4■■■□□ 2.3
UBE2E3-207ENST00000602499 U2SURPO15042 1029 aaKnown RBP29.39■■■□□ 2.3
UBE2E3-207ENST00000602499 AEBP1Q8IUX7 1158 aa29.38■■■□□ 2.29
UBE2E3-207ENST00000602499 MARCH10Q8NA82 808 aaPredicted RBP29.35■■■□□ 2.29
UBE2E3-207ENST00000602499 SPG7Q9UQ90 795 aa29.35■■■□□ 2.29
UBE2E3-207ENST00000602499 BCL9O00512 1426 aa29.35■■■□□ 2.29
UBE2E3-207ENST00000602499 PKD1L3Q7Z443 1732 aa29.34■■■□□ 2.29
UBE2E3-207ENST00000602499 HMOX1P09601 288 aa29.34■■■□□ 2.29
UBE2E3-207ENST00000602499 AMOTQ4VCS5 1084 aa29.34■■■□□ 2.29
UBE2E3-207ENST00000602499 FAM196AQ6ZSG2 479 aa29.34■■■□□ 2.29
UBE2E3-207ENST00000602499 FCHSD2O94868 740 aa29.33■■■□□ 2.29
UBE2E3-207ENST00000602499 U2AF1L5P0DN76 240 aaPredicted RBP29.33■■■□□ 2.29
UBE2E3-207ENST00000602499 U2AF1Q01081 240 aaKnown RBP eCLIP29.33■■■□□ 2.29
UBE2E3-207ENST00000602499 PCDH11XQ9BZA7 1347 aa29.32■■■□□ 2.28
UBE2E3-207ENST00000602499 PCDH11YQ9BZA8 1340 aa29.32■■■□□ 2.28
UBE2E3-207ENST00000602499 PLEKHO1Q53GL0 409 aaPredicted RBP29.31■■■□□ 2.28
UBE2E3-207ENST00000602499 SHANK3Q9BYB0 1731 aa29.31■■■□□ 2.28
UBE2E3-207ENST00000602499 DIEXFQ68CQ4 756 aaKnown RBP29.3■■■□□ 2.28
UBE2E3-207ENST00000602499 DDX54Q8TDD1 881 aaKnown RBP29.29■■■□□ 2.28
UBE2E3-207ENST00000602499 RSPH6AQ9H0K4 717 aa29.29■■■□□ 2.28
UBE2E3-207ENST00000602499 FAM182BQ5T319 152 aa29.27■■■□□ 2.28
UBE2E3-207ENST00000602499 PNNQ9H307 717 aaKnown RBP29.27■■■□□ 2.28
UBE2E3-207ENST00000602499 CYP27B1O15528 508 aa29.26■■■□□ 2.27
UBE2E3-207ENST00000602499 IFNL2Q8IZJ0 200 aa29.25■■■□□ 2.27
UBE2E3-207ENST00000602499 NKX1-1Q15270 411 aaPredicted RBP29.24■■■□□ 2.27
UBE2E3-207ENST00000602499 PRKAR2BP31323 418 aa29.23■■■□□ 2.27
UBE2E3-207ENST00000602499 WDR43Q15061 677 aaKnown RBP eCLIP29.23■■■□□ 2.27
UBE2E3-207ENST00000602499 CCDC125Q86Z20 511 aa29.23■■■□□ 2.27
UBE2E3-207ENST00000602499 PHKG2P15735 406 aa29.22■■■□□ 2.27
UBE2E3-207ENST00000602499 CCDC184Q52MB2 194 aa29.2■■■□□ 2.26
UBE2E3-207ENST00000602499 ZNF530Q6P9A1 599 aaPredicted RBP29.2■■■□□ 2.26
UBE2E3-207ENST00000602499 HSP90AB1P08238 724 aaKnown RBP29.19■■■□□ 2.26
UBE2E3-207ENST00000602499 GAS2L2Q8NHY3 880 aa29.19■■■□□ 2.26
UBE2E3-207ENST00000602499 PLEKHF1Q96S99 279 aa29.19■■■□□ 2.26
UBE2E3-207ENST00000602499 MRS2Q9HD23 443 aa29.19■■■□□ 2.26
UBE2E3-207ENST00000602499 SBF2Q86WG5 1849 aa29.19■■■□□ 2.26
UBE2E3-207ENST00000602499 MTHFSDQ2M296 383 aaKnown RBP29.18■■■□□ 2.26
UBE2E3-207ENST00000602499 AKAP4Q5JQC9 854 aa29.17■■■□□ 2.26
UBE2E3-207ENST00000602499 C1orf141Q5JVX7 400 aa29.17■■■□□ 2.26
UBE2E3-207ENST00000602499 PHACTR3Q96KR7 559 aa29.17■■■□□ 2.26
UBE2E3-207ENST00000602499 NEFMP07197 916 aa29.16■■■□□ 2.26
UBE2E3-207ENST00000602499 PNISRQ8TF01 805 aaKnown RBP29.16■■■□□ 2.26
UBE2E3-207ENST00000602499 BCL11BQ9C0K0 894 aaPredicted RBP29.16■■■□□ 2.26
UBE2E3-207ENST00000602499 ADAMTS8Q9UP79 889 aa29.16■■■□□ 2.26
UBE2E3-207ENST00000602499 DCAF5Q96JK2 942 aa29.15■■■□□ 2.26
UBE2E3-207ENST00000602499 CCER2I3L3R5 266 aa29.14■■■□□ 2.26
UBE2E3-207ENST00000602499 TRIM37O94972 964 aa29.14■■■□□ 2.26
UBE2E3-207ENST00000602499 NHSQ6T4R5 1651 aa29.12■■■□□ 2.25
UBE2E3-207ENST00000602499 KAT6BQ8WYB5 2073 aa29.11■■■□□ 2.25
UBE2E3-207ENST00000602499 SF3B2Q13435 895 aaKnown RBP29.1■■■□□ 2.25
UBE2E3-207ENST00000602499 ACSBG1Q96GR2 724 aa29.1■■■□□ 2.25
UBE2E3-207ENST00000602499 MAPK8IP3Q9UPT6 1336 aa29.1■■■□□ 2.25
UBE2E3-207ENST00000602499 ERVV-2B6SEH9 535 aa29.09■■■□□ 2.25
UBE2E3-207ENST00000602499 PRIM1P49642 420 aaKnown RBP29.09■■■□□ 2.25
UBE2E3-207ENST00000602499 RUNDC1Q96C34 613 aa29.09■■■□□ 2.25
UBE2E3-207ENST00000602499 DOT1LQ8TEK3 1739 aa29.08■■■□□ 2.25
UBE2E3-207ENST00000602499 GNAT3A8MTJ3 354 aa29.08■■■□□ 2.25
UBE2E3-207ENST00000602499 KCNQ2O43526 872 aa29.08■■■□□ 2.25
UBE2E3-207ENST00000602499 TNS1Q9HBL0 1735 aaKnown RBP29.08■■■□□ 2.25
UBE2E3-207ENST00000602499 MAP3K5Q99683 1374 aa29.07■■■□□ 2.24
UBE2E3-207ENST00000602499 KDM6AO15550 1401 aaPredicted RBP29.06■■■□□ 2.24
UBE2E3-207ENST00000602499 HTATSF1O43719 755 aaKnown RBP29.06■■■□□ 2.24
UBE2E3-207ENST00000602499 TOGARAM1Q9Y4F4 1720 aa29.06■■■□□ 2.24
UBE2E3-207ENST00000602499 NFE2L2Q16236 605 aa29.05■■■□□ 2.24
UBE2E3-207ENST00000602499 MPRIPQ6WCQ1 1025 aa29.05■■■□□ 2.24
UBE2E3-207ENST00000602499 ADAMTS7Q9UKP4 1686 aa29.05■■■□□ 2.24
UBE2E3-207ENST00000602499 PTF1AQ7RTS3 328 aa29.04■■■□□ 2.24
UBE2E3-207ENST00000602499 MIER1Q8N108 512 aa29.04■■■□□ 2.24
UBE2E3-207ENST00000602499 SCN11AQ9UI33 1791 aa29.03■■■□□ 2.24
UBE2E3-207ENST00000602499 PLSCR1O15162 318 aa29.03■■■□□ 2.24
UBE2E3-207ENST00000602499 APBA3O96018 575 aa29.03■■■□□ 2.24
UBE2E3-207ENST00000602499 SYTL4Q96C24 671 aaPredicted RBP29.03■■■□□ 2.24
UBE2E3-207ENST00000602499 ITGB4P16144 1822 aa29.03■■■□□ 2.24
UBE2E3-207ENST00000602499 RNMTO43148 476 aaKnown RBP29.02■■■□□ 2.24
UBE2E3-207ENST00000602499 BAG6P46379 1132 aa29.02■■■□□ 2.24
UBE2E3-207ENST00000602499 CCDC146Q8IYE0 955 aa29.01■■■□□ 2.23
UBE2E3-207ENST00000602499 LGR6Q9HBX8 967 aa29.01■■■□□ 2.23
UBE2E3-207ENST00000602499 BTAF1O14981 1849 aa29■■■□□ 2.23
UBE2E3-207ENST00000602499 RTF1Q92541 710 aaKnown RBP29■■■□□ 2.23
UBE2E3-207ENST00000602499 TMOD3Q9NYL9 352 aa29■■■□□ 2.23
UBE2E3-207ENST00000602499 TMPOP42166 694 aaKnown RBP28.99■■■□□ 2.23
UBE2E3-207ENST00000602499 IL17REQ8NFR9 667 aa28.99■■■□□ 2.23
UBE2E3-207ENST00000602499 PIGBQ92521 554 aa28.99■■■□□ 2.23
UBE2E3-207ENST00000602499 CEMIPQ8WUJ3 1361 aa28.99■■■□□ 2.23
UBE2E3-207ENST00000602499 CABP4P57796 275 aa28.98■■■□□ 2.23
UBE2E3-207ENST00000602499 VIRMAQ69YN4 1812 aaKnown RBP28.98■■■□□ 2.23
UBE2E3-207ENST00000602499 RGPD3A6NKT7 1758 aaPredicted RBP28.98■■■□□ 2.23
UBE2E3-207ENST00000602499 RGPD4Q7Z3J3 1758 aa28.98■■■□□ 2.23
UBE2E3-207ENST00000602499 DLG5Q8TDM6 1919 aa28.97■■■□□ 2.23
UBE2E3-207ENST00000602499 SLC52A2Q9HAB3 445 aa28.97■■■□□ 2.23
UBE2E3-207ENST00000602499 MRC1P22897 1456 aa28.97■■■□□ 2.23
UBE2E3-207ENST00000602499 RIPK4P57078 832 aa28.95■■■□□ 2.22
UBE2E3-207ENST00000602499 NFATC2IPQ8NCF5 419 aa28.95■■■□□ 2.22
UBE2E3-207ENST00000602499 CAMKK2Q96RR4 588 aa28.95■■■□□ 2.22
UBE2E3-207ENST00000602499 LMOD3Q0VAK6 560 aa28.94■■■□□ 2.22
UBE2E3-207ENST00000602499 DEFB132Q7Z7B7 95 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms