RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 SMG6Q86US8 1419 aaKnown RBP21.05■□□□□ 0.96
SMG9-213ENST00000602222 PAPPAQ13219 1627 aa21.05■□□□□ 0.96
SMG9-213ENST00000602222 PRIM1P49642 420 aaKnown RBP21.05■□□□□ 0.96
SMG9-213ENST00000602222 NSD3Q9BZ95 1437 aa21.04■□□□□ 0.96
SMG9-213ENST00000602222 SGIP1Q9BQI5 828 aa21.04■□□□□ 0.96
SMG9-213ENST00000602222 ATF5Q9Y2D1 282 aaPredicted RBP21.04■□□□□ 0.96
SMG9-213ENST00000602222 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
SMG9-213ENST00000602222 RGPD2P0DJD1 1756 aa21.02■□□□□ 0.96
SMG9-213ENST00000602222 MYOM1P52179 1685 aa21.02■□□□□ 0.96
SMG9-213ENST00000602222 NSD2O96028 1365 aa21.02■□□□□ 0.96
SMG9-213ENST00000602222 TATP17735 454 aaPredicted RBP21.02■□□□□ 0.96
SMG9-213ENST00000602222 ZNF827Q17R98 1081 aa21.02■□□□□ 0.96
SMG9-213ENST00000602222 USHBP1Q8N6Y0 703 aa21.02■□□□□ 0.96
SMG9-213ENST00000602222 AKT1S1Q96B36 256 aa21.02■□□□□ 0.96
SMG9-213ENST00000602222 SYTL4Q96C24 671 aaPredicted RBP21.01■□□□□ 0.95
SMG9-213ENST00000602222 KIF20BQ96Q89 1820 aa21.01■□□□□ 0.95
SMG9-213ENST00000602222 DCAF8L1A6NGE4 600 aa21■□□□□ 0.95
SMG9-213ENST00000602222 EMILIN1Q9Y6C2 1016 aa21■□□□□ 0.95
SMG9-213ENST00000602222 SHANK3Q9BYB0 1731 aa20.99■□□□□ 0.95
SMG9-213ENST00000602222 SLC16A10Q8TF71 515 aa20.98■□□□□ 0.95
SMG9-213ENST00000602222 WASHC2AQ641Q2 1341 aa20.97■□□□□ 0.95
SMG9-213ENST00000602222 PCDH11XQ9BZA7 1347 aa20.97■□□□□ 0.95
SMG9-213ENST00000602222 PCDH11YQ9BZA8 1340 aa20.97■□□□□ 0.95
SMG9-213ENST00000602222 NCAPD2Q15021 1401 aa20.96■□□□□ 0.95
SMG9-213ENST00000602222 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
SMG9-213ENST00000602222 SYT17Q9BSW7 474 aa20.96■□□□□ 0.95
SMG9-213ENST00000602222 FHDC1Q9C0D6 1143 aaPredicted RBP20.95■□□□□ 0.94
SMG9-213ENST00000602222 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
SMG9-213ENST00000602222 YY1P25490 414 aa20.94■□□□□ 0.94
SMG9-213ENST00000602222 ARXQ96QS3 562 aa20.94■□□□□ 0.94
SMG9-213ENST00000602222 PNPLA7Q6ZV29 1317 aa20.94■□□□□ 0.94
SMG9-213ENST00000602222 CYP27B1O15528 508 aa20.93■□□□□ 0.94
SMG9-213ENST00000602222 KCNQ4P56696 695 aa20.93■□□□□ 0.94
SMG9-213ENST00000602222 POLKQ9UBT6 870 aa20.93■□□□□ 0.94
SMG9-213ENST00000602222 CCNL1Q9UK58 526 aaPredicted RBP20.93■□□□□ 0.94
SMG9-213ENST00000602222 MAP3K5Q99683 1374 aa20.93■□□□□ 0.94
SMG9-213ENST00000602222 LY75O60449 1722 aa20.92■□□□□ 0.94
SMG9-213ENST00000602222 PPM1GO15355 546 aaPredicted RBP20.92■□□□□ 0.94
SMG9-213ENST00000602222 HSPA5P11021 654 aaKnown RBP20.92■□□□□ 0.94
SMG9-213ENST00000602222 TFCP2L1Q9NZI6 479 aa20.92■□□□□ 0.94
SMG9-213ENST00000602222 HMGB2P26583 209 aaKnown RBP20.91■□□□□ 0.94
SMG9-213ENST00000602222 QSER1Q2KHR3 1735 aa20.91■□□□□ 0.94
SMG9-213ENST00000602222 ANKRD26Q9UPS8 1709 aa20.9■□□□□ 0.94
SMG9-213ENST00000602222 NKX1-1Q15270 411 aaPredicted RBP20.9■□□□□ 0.94
SMG9-213ENST00000602222 EYA1Q99502 592 aa20.9■□□□□ 0.94
SMG9-213ENST00000602222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.9■□□□□ 0.94
SMG9-213ENST00000602222 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.93
SMG9-213ENST00000602222 POLR3GLQ9BT43 218 aa20.89■□□□□ 0.93
SMG9-213ENST00000602222 PANK3Q9H999 370 aa20.88■□□□□ 0.93
SMG9-213ENST00000602222 SPG7Q9UQ90 795 aa20.88■□□□□ 0.93
SMG9-213ENST00000602222 MAP2P11137 1827 aaKnown RBP20.86■□□□□ 0.93
SMG9-213ENST00000602222 POLD1P28340 1107 aa20.86■□□□□ 0.93
SMG9-213ENST00000602222 MPRIPQ6WCQ1 1025 aa20.86■□□□□ 0.93
SMG9-213ENST00000602222 SMARCC1Q92922 1105 aaPredicted RBP20.86■□□□□ 0.93
SMG9-213ENST00000602222 PKD1L3Q7Z443 1732 aa20.86■□□□□ 0.93
SMG9-213ENST00000602222 PALLDQ8WX93 1383 aa20.85■□□□□ 0.93
SMG9-213ENST00000602222 PLEKHG2Q9H7P9 1386 aa20.85■□□□□ 0.93
SMG9-213ENST00000602222 COL24A1Q17RW2 1714 aa20.85■□□□□ 0.93
SMG9-213ENST00000602222 EIF4A2Q14240 407 aaKnown RBP20.85■□□□□ 0.93
SMG9-213ENST00000602222 COL23A1Q86Y22 540 aaPredicted RBP20.83■□□□□ 0.93
SMG9-213ENST00000602222 PIGBQ92521 554 aa20.83■□□□□ 0.93
SMG9-213ENST00000602222 TNNT2P45379 298 aaPredicted RBP20.82■□□□□ 0.92
SMG9-213ENST00000602222 TUBGCP6Q96RT7 1819 aa20.82■□□□□ 0.92
SMG9-213ENST00000602222 IFNL2Q8IZJ0 200 aa20.81■□□□□ 0.92
SMG9-213ENST00000602222 FLAD1Q8NFF5 587 aa20.81■□□□□ 0.92
SMG9-213ENST00000602222 IGSF1Q8N6C5 1336 aa20.8■□□□□ 0.92
SMG9-213ENST00000602222 PHKG2P15735 406 aa20.8■□□□□ 0.92
SMG9-213ENST00000602222 TOGARAM1Q9Y4F4 1720 aa20.8■□□□□ 0.92
SMG9-213ENST00000602222 ITGB4P16144 1822 aa20.77■□□□□ 0.92
SMG9-213ENST00000602222 MSH5O43196 834 aa20.77■□□□□ 0.92
SMG9-213ENST00000602222 TMOD3Q9NYL9 352 aa20.77■□□□□ 0.92
SMG9-213ENST00000602222 UTRNP46939 3433 aa20.76■□□□□ 0.91
SMG9-213ENST00000602222 MORC1Q86VD1 984 aa20.76■□□□□ 0.91
SMG9-213ENST00000602222 C5P01031 1676 aa20.76■□□□□ 0.91
SMG9-213ENST00000602222 LOC102724428A0A0B4J2F2 783 aa20.75■□□□□ 0.91
SMG9-213ENST00000602222 SIK1P57059 783 aa20.75■□□□□ 0.91
SMG9-213ENST00000602222 KNSTRNQ9Y448 316 aa20.75■□□□□ 0.91
SMG9-213ENST00000602222 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
SMG9-213ENST00000602222 ASAP1Q9ULH1 1129 aa20.74■□□□□ 0.91
SMG9-213ENST00000602222 ERVV-2B6SEH9 535 aa20.73■□□□□ 0.91
SMG9-213ENST00000602222 GPR162Q16538 588 aa20.73■□□□□ 0.91
SMG9-213ENST00000602222 PLEKHO1Q53GL0 409 aaPredicted RBP20.73■□□□□ 0.91
SMG9-213ENST00000602222 KLHL34Q8N239 644 aa20.73■□□□□ 0.91
SMG9-213ENST00000602222 AK7Q96M32 723 aa20.73■□□□□ 0.91
SMG9-213ENST00000602222 HSP90AB1P08238 724 aaKnown RBP20.72■□□□□ 0.91
SMG9-213ENST00000602222 AMOTQ4VCS5 1084 aa20.72■□□□□ 0.91
SMG9-213ENST00000602222 NLGN2Q8NFZ4 835 aa20.72■□□□□ 0.91
SMG9-213ENST00000602222 ATG3Q9NT62 314 aa20.72■□□□□ 0.91
SMG9-213ENST00000602222 C4BP0C0L5 1744 aa20.72■□□□□ 0.91
SMG9-213ENST00000602222 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
SMG9-213ENST00000602222 MSL1Q68DK7 614 aa20.71■□□□□ 0.91
SMG9-213ENST00000602222 AMIGO3Q86WK7 504 aa20.71■□□□□ 0.91
SMG9-213ENST00000602222 ZNF784Q8NCA9 323 aaPredicted RBP20.71■□□□□ 0.91
SMG9-213ENST00000602222 LINC00116Q8NCU8 138 aa20.71■□□□□ 0.91
SMG9-213ENST00000602222 DCAF5Q96JK2 942 aa20.71■□□□□ 0.91
SMG9-213ENST00000602222 SSFA2P28290 1259 aa20.7■□□□□ 0.9
SMG9-213ENST00000602222 ITPK1Q13572 414 aa20.7■□□□□ 0.9
SMG9-213ENST00000602222 KIF7Q2M1P5 1343 aa20.7■□□□□ 0.9
SMG9-213ENST00000602222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.69■□□□□ 0.9
SMG9-213ENST00000602222 CD2APQ9Y5K6 639 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms