RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 PRIM1P49642 420 aaKnown RBP25.99■■□□□ 1.75
IRF3-231ENST00000602190 DDX54Q8TDD1 881 aaKnown RBP25.99■■□□□ 1.75
IRF3-231ENST00000602190 TAF1LQ8IZX4 1826 aa25.98■■□□□ 1.75
IRF3-231ENST00000602190 POLD1P28340 1107 aa25.98■■□□□ 1.75
IRF3-231ENST00000602190 GPR162Q16538 588 aa25.98■■□□□ 1.75
IRF3-231ENST00000602190 C5P01031 1676 aa25.97■■□□□ 1.75
IRF3-231ENST00000602190 SENP3-EIF4A1A0A087X0R7 540 aa25.97■■□□□ 1.75
IRF3-231ENST00000602190 NLGN2Q8NFZ4 835 aa25.97■■□□□ 1.75
IRF3-231ENST00000602190 KCNQ4P56696 695 aa25.96■■□□□ 1.75
IRF3-231ENST00000602190 TFCP2L1Q9NZI6 479 aa25.95■■□□□ 1.74
IRF3-231ENST00000602190 ZCRB1Q8TBF4 217 aaKnown RBP25.94■■□□□ 1.74
IRF3-231ENST00000602190 CGNL1Q0VF96 1302 aa25.92■■□□□ 1.74
IRF3-231ENST00000602190 LTV1Q96GA3 475 aaPredicted RBP25.92■■□□□ 1.74
IRF3-231ENST00000602190 COG3Q96JB2 828 aa25.92■■□□□ 1.74
IRF3-231ENST00000602190 YBX3P16989 372 aaKnown RBP eCLIP25.91■■□□□ 1.74
IRF3-231ENST00000602190 TOGARAM1Q9Y4F4 1720 aa25.91■■□□□ 1.74
IRF3-231ENST00000602190 FBLN1P23142 703 aa25.9■■□□□ 1.74
IRF3-231ENST00000602190 COL23A1Q86Y22 540 aaPredicted RBP25.9■■□□□ 1.74
IRF3-231ENST00000602190 CCNL1Q9UK58 526 aaPredicted RBP25.9■■□□□ 1.74
IRF3-231ENST00000602190 CEP350Q5VT06 3117 aa25.9■■□□□ 1.74
IRF3-231ENST00000602190 GIGYF1O75420 1035 aaPredicted RBP25.89■■□□□ 1.74
IRF3-231ENST00000602190 SYTL4Q96C24 671 aaPredicted RBP25.89■■□□□ 1.74
IRF3-231ENST00000602190 USP47Q96K76 1375 aa25.88■■□□□ 1.73
IRF3-231ENST00000602190 NBPF6Q5VWK0 638 aa25.88■■□□□ 1.73
IRF3-231ENST00000602190 NBPF4Q96M43 638 aa25.88■■□□□ 1.73
IRF3-231ENST00000602190 PKD1L3Q7Z443 1732 aa25.88■■□□□ 1.73
IRF3-231ENST00000602190 NCAPD2Q15021 1401 aa25.87■■□□□ 1.73
IRF3-231ENST00000602190 ITGB4P16144 1822 aa25.86■■□□□ 1.73
IRF3-231ENST00000602190 GRIN3BO60391 1043 aa25.86■■□□□ 1.73
IRF3-231ENST00000602190 AMPHP49418 695 aa25.86■■□□□ 1.73
IRF3-231ENST00000602190 UBR3Q6ZT12 1888 aa25.85■■□□□ 1.73
IRF3-231ENST00000602190 ADCY9O60503 1353 aa25.85■■□□□ 1.73
IRF3-231ENST00000602190 SLC24A1O60721 1099 aa25.85■■□□□ 1.73
IRF3-231ENST00000602190 MAP2P11137 1827 aaKnown RBP25.85■■□□□ 1.73
IRF3-231ENST00000602190 KIF24Q5T7B8 1368 aa25.84■■□□□ 1.73
IRF3-231ENST00000602190 KIF20BQ96Q89 1820 aa25.84■■□□□ 1.73
IRF3-231ENST00000602190 ST20-MTHFSA0A0A6YYL1 179 aa25.84■■□□□ 1.73
IRF3-231ENST00000602190 C4BP0C0L5 1744 aa25.84■■□□□ 1.73
IRF3-231ENST00000602190 KLHL34Q8N239 644 aa25.84■■□□□ 1.73
IRF3-231ENST00000602190 INSRP06213 1382 aa25.83■■□□□ 1.73
IRF3-231ENST00000602190 FYB1O15117 783 aa25.83■■□□□ 1.73
IRF3-231ENST00000602190 ANKRD26Q9UPS8 1709 aa25.83■■□□□ 1.72
IRF3-231ENST00000602190 TONSLQ96HA7 1378 aa25.82■■□□□ 1.72
IRF3-231ENST00000602190 CD2APQ9Y5K6 639 aa25.81■■□□□ 1.72
IRF3-231ENST00000602190 RRS1Q15050 365 aaKnown RBP25.8■■□□□ 1.72
IRF3-231ENST00000602190 PALLDQ8WX93 1383 aa25.8■■□□□ 1.72
IRF3-231ENST00000602190 SMG6Q86US8 1419 aaKnown RBP25.8■■□□□ 1.72
IRF3-231ENST00000602190 ATP10DQ9P241 1426 aa25.8■■□□□ 1.72
IRF3-231ENST00000602190 HMGB2P26583 209 aaKnown RBP25.79■■□□□ 1.72
IRF3-231ENST00000602190 PELP1Q8IZL8 1130 aaKnown RBP25.79■■□□□ 1.72
IRF3-231ENST00000602190 FLAD1Q8NFF5 587 aa25.79■■□□□ 1.72
IRF3-231ENST00000602190 PCDH11XQ9BZA7 1347 aa25.79■■□□□ 1.72
IRF3-231ENST00000602190 PCDH11YQ9BZA8 1340 aa25.79■■□□□ 1.72
IRF3-231ENST00000602190 USHBP1Q8N6Y0 703 aa25.77■■□□□ 1.72
IRF3-231ENST00000602190 RAPGEF4Q8WZA2 1011 aa25.77■■□□□ 1.72
IRF3-231ENST00000602190 FLT4P35916 1363 aa25.77■■□□□ 1.72
IRF3-231ENST00000602190 CYP27B1O15528 508 aa25.76■■□□□ 1.71
IRF3-231ENST00000602190 CICQ96RK0 1608 aaPredicted RBP25.75■■□□□ 1.71
IRF3-231ENST00000602190 MSL1Q68DK7 614 aa25.75■■□□□ 1.71
IRF3-231ENST00000602190 TATP17735 454 aaPredicted RBP25.74■■□□□ 1.71
IRF3-231ENST00000602190 HSP90AB2PQ58FF8 381 aa25.74■■□□□ 1.71
IRF3-231ENST00000602190 AMIGO3Q86WK7 504 aa25.74■■□□□ 1.71
IRF3-231ENST00000602190 GGNBP2Q9H3C7 697 aa25.74■■□□□ 1.71
IRF3-231ENST00000602190 NKX1-1Q15270 411 aaPredicted RBP25.72■■□□□ 1.71
IRF3-231ENST00000602190 IFFO2Q5TF58 517 aa25.72■■□□□ 1.71
IRF3-231ENST00000602190 KIF13BQ9NQT8 1826 aa25.72■■□□□ 1.71
IRF3-231ENST00000602190 NSD3Q9BZ95 1437 aa25.71■■□□□ 1.71
IRF3-231ENST00000602190 MSH5O43196 834 aa25.7■■□□□ 1.7
IRF3-231ENST00000602190 KIAA1551Q9HCM1 1747 aa25.7■■□□□ 1.7
IRF3-231ENST00000602190 SMARCC1Q92922 1105 aaPredicted RBP25.69■■□□□ 1.7
IRF3-231ENST00000602190 ZNF831Q5JPB2 1677 aa25.68■■□□□ 1.7
IRF3-231ENST00000602190 MPRIPQ6WCQ1 1025 aa25.66■■□□□ 1.7
IRF3-231ENST00000602190 PIGBQ92521 554 aa25.66■■□□□ 1.7
IRF3-231ENST00000602190 TMF1P82094 1093 aa25.65■■□□□ 1.7
IRF3-231ENST00000602190 SSFA2P28290 1259 aa25.64■■□□□ 1.7
IRF3-231ENST00000602190 PLEKHG2Q9H7P9 1386 aa25.64■■□□□ 1.69
IRF3-231ENST00000602190 CARD14Q9BXL6 1004 aa25.63■■□□□ 1.69
IRF3-231ENST00000602190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.63■■□□□ 1.69
IRF3-231ENST00000602190 IGSF1Q8N6C5 1336 aa25.63■■□□□ 1.69
IRF3-231ENST00000602190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.62■■□□□ 1.69
IRF3-231ENST00000602190 AK7Q96M32 723 aa25.62■■□□□ 1.69
IRF3-231ENST00000602190 GPBP1L1Q9HC44 474 aaPredicted RBP25.62■■□□□ 1.69
IRF3-231ENST00000602190 EMILIN1Q9Y6C2 1016 aa25.61■■□□□ 1.69
IRF3-231ENST00000602190 LOC102724428A0A0B4J2F2 783 aa25.6■■□□□ 1.69
IRF3-231ENST00000602190 HSPA6P17066 643 aa25.6■■□□□ 1.69
IRF3-231ENST00000602190 SIK1P57059 783 aa25.6■■□□□ 1.69
IRF3-231ENST00000602190 LINC00116Q8NCU8 138 aa25.6■■□□□ 1.69
IRF3-231ENST00000602190 WASHC2AQ641Q2 1341 aa25.6■■□□□ 1.69
IRF3-231ENST00000602190 KDRP35968 1356 aa25.58■■□□□ 1.69
IRF3-231ENST00000602190 BRCA1P38398 1863 aaKnown RBP25.58■■□□□ 1.69
IRF3-231ENST00000602190 SMIM5Q71RC9 77 aa25.58■■□□□ 1.69
IRF3-231ENST00000602190 COL5A3P25940 1745 aaPredicted RBP25.57■■□□□ 1.68
IRF3-231ENST00000602190 PXDNLA1KZ92 1463 aa25.57■■□□□ 1.68
IRF3-231ENST00000602190 KIF3CO14782 793 aa25.56■■□□□ 1.68
IRF3-231ENST00000602190 ITPK1Q13572 414 aa25.56■■□□□ 1.68
IRF3-231ENST00000602190 CDCA8Q53HL2 280 aa25.56■■□□□ 1.68
IRF3-231ENST00000602190 EYA1Q99502 592 aa25.55■■□□□ 1.68
IRF3-231ENST00000602190 SPG7Q9UQ90 795 aa25.55■■□□□ 1.68
IRF3-231ENST00000602190 PHF14O94880 888 aa25.53■■□□□ 1.68
IRF3-231ENST00000602190 ASAP1Q9ULH1 1129 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms