RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-227	ENST00000602056	SYTL4	Q96C24	671 aa	Predicted RBP	32.4	■■■□□ 2.78
GTPBP3-227	ENST00000602056	KCNQ4	P56696	695 aa		32.39	■■■□□ 2.78
GTPBP3-227	ENST00000602056	INSR	P06213	1382 aa		32.39	■■■□□ 2.78
GTPBP3-227	ENST00000602056	MYOM1	P52179	1685 aa		32.39	■■■□□ 2.78
GTPBP3-227	ENST00000602056	RGPD2	P0DJD1	1756 aa		32.39	■■■□□ 2.78
GTPBP3-227	ENST00000602056	NSD3	Q9BZ95	1437 aa		32.38	■■■□□ 2.77
GTPBP3-227	ENST00000602056	SLC27A3	Q5K4L6	730 aa		32.38	■■■□□ 2.77
GTPBP3-227	ENST00000602056	PCGF6	Q9BYE7	350 aa		32.38	■■■□□ 2.77
GTPBP3-227	ENST00000602056	FLT4	P35916	1363 aa		32.36	■■■□□ 2.77
GTPBP3-227	ENST00000602056	YY1	P25490	414 aa		32.36	■■■□□ 2.77
GTPBP3-227	ENST00000602056	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.36	■■■□□ 2.77
GTPBP3-227	ENST00000602056	SHANK3	Q9BYB0	1731 aa		32.35	■■■□□ 2.77
GTPBP3-227	ENST00000602056	CLSPN	Q9HAW4	1339 aa		32.35	■■■□□ 2.77
GTPBP3-227	ENST00000602056	EMILIN1	Q9Y6C2	1016 aa		32.35	■■■□□ 2.77
GTPBP3-227	ENST00000602056	SMG6	Q86US8	1419 aa	Known RBP	32.34	■■■□□ 2.77
GTPBP3-227	ENST00000602056	CGNL1	Q0VF96	1302 aa		32.34	■■■□□ 2.77
GTPBP3-227	ENST00000602056	RAPGEF4	Q8WZA2	1011 aa		32.34	■■■□□ 2.77
GTPBP3-227	ENST00000602056	SYT17	Q9BSW7	474 aa		32.34	■■■□□ 2.77
GTPBP3-227	ENST00000602056	KIF24	Q5T7B8	1368 aa		32.33	■■■□□ 2.77
GTPBP3-227	ENST00000602056	KAT6B	Q8WYB5	2073 aa		32.33	■■■□□ 2.77
GTPBP3-227	ENST00000602056	TAT	P17735	454 aa	Predicted RBP	32.31	■■■□□ 2.76
GTPBP3-227	ENST00000602056	DCAF8L1	A6NGE4	600 aa		32.3	■■■□□ 2.76
GTPBP3-227	ENST00000602056	DOT1L	Q8TEK3	1739 aa		32.3	■■■□□ 2.76
GTPBP3-227	ENST00000602056	PNPLA7	Q6ZV29	1317 aa		32.29	■■■□□ 2.76
GTPBP3-227	ENST00000602056	KIF20B	Q96Q89	1820 aa		32.29	■■■□□ 2.76
GTPBP3-227	ENST00000602056	ARX	Q96QS3	562 aa		32.29	■■■□□ 2.76
GTPBP3-227	ENST00000602056	CYP27B1	O15528	508 aa		32.25	■■■□□ 2.75
GTPBP3-227	ENST00000602056	CCNL1	Q9UK58	526 aa	Predicted RBP	32.25	■■■□□ 2.75
GTPBP3-227	ENST00000602056	TFCP2L1	Q9NZI6	479 aa		32.24	■■■□□ 2.75
GTPBP3-227	ENST00000602056	PCDH11X	Q9BZA7	1347 aa		32.24	■■■□□ 2.75
GTPBP3-227	ENST00000602056	PCDH11Y	Q9BZA8	1340 aa		32.24	■■■□□ 2.75
GTPBP3-227	ENST00000602056	SLC16A10	Q8TF71	515 aa		32.23	■■■□□ 2.75
GTPBP3-227	ENST00000602056	PPM1G	O15355	546 aa	Predicted RBP	32.22	■■■□□ 2.75
GTPBP3-227	ENST00000602056	NCAPD2	Q15021	1401 aa		32.22	■■■□□ 2.75
GTPBP3-227	ENST00000602056	WASHC2A	Q641Q2	1341 aa		32.21	■■■□□ 2.75
GTPBP3-227	ENST00000602056	MAP3K5	Q99683	1374 aa		32.2	■■■□□ 2.75
GTPBP3-227	ENST00000602056	POLR3GL	Q9BT43	218 aa		32.2	■■■□□ 2.75
GTPBP3-227	ENST00000602056	LY75	O60449	1722 aa		32.2	■■■□□ 2.74
GTPBP3-227	ENST00000602056	POLK	Q9UBT6	870 aa		32.19	■■■□□ 2.74
GTPBP3-227	ENST00000602056	EYA1	Q99502	592 aa		32.17	■■■□□ 2.74
GTPBP3-227	ENST00000602056	HSPA5	P11021	654 aa	Known RBP	32.16	■■■□□ 2.74
GTPBP3-227	ENST00000602056	MPRIP	Q6WCQ1	1025 aa		32.15	■■■□□ 2.74
GTPBP3-227	ENST00000602056	QSER1	Q2KHR3	1735 aa		32.14	■■■□□ 2.74
GTPBP3-227	ENST00000602056	COL23A1	Q86Y22	540 aa	Predicted RBP	32.14	■■■□□ 2.74
GTPBP3-227	ENST00000602056	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.13	■■■□□ 2.73
GTPBP3-227	ENST00000602056	PALLD	Q8WX93	1383 aa		32.12	■■■□□ 2.73
GTPBP3-227	ENST00000602056	POLD1	P28340	1107 aa		32.12	■■■□□ 2.73
GTPBP3-227	ENST00000602056	NKX1-1	Q15270	411 aa	Predicted RBP	32.12	■■■□□ 2.73
GTPBP3-227	ENST00000602056	TUBGCP6	Q96RT7	1819 aa		32.12	■■■□□ 2.73
GTPBP3-227	ENST00000602056	ANKRD26	Q9UPS8	1709 aa		32.12	■■■□□ 2.73
GTPBP3-227	ENST00000602056	TNNT2	P45379	298 aa	Predicted RBP	32.11	■■■□□ 2.73
GTPBP3-227	ENST00000602056	PIGB	Q92521	554 aa		32.09	■■■□□ 2.73
GTPBP3-227	ENST00000602056	EIF4A2	Q14240	407 aa	Known RBP	32.08	■■■□□ 2.73
GTPBP3-227	ENST00000602056	PANK3	Q9H999	370 aa		32.08	■■■□□ 2.73
GTPBP3-227	ENST00000602056	SPG7	Q9UQ90	795 aa		32.08	■■■□□ 2.73
GTPBP3-227	ENST00000602056	COL24A1	Q17RW2	1714 aa		32.08	■■■□□ 2.73
GTPBP3-227	ENST00000602056	PKD1L3	Q7Z443	1732 aa		32.07	■■■□□ 2.72
GTPBP3-227	ENST00000602056	TOGARAM1	Q9Y4F4	1720 aa		32.07	■■■□□ 2.72
GTPBP3-227	ENST00000602056	MSH5	O43196	834 aa		32.06	■■■□□ 2.72
GTPBP3-227	ENST00000602056	KLHL34	Q8N239	644 aa		32.06	■■■□□ 2.72
GTPBP3-227	ENST00000602056	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
GTPBP3-227	ENST00000602056	UTRN	P46939	3433 aa		32.04	■■■□□ 2.72
GTPBP3-227	ENST00000602056	NLGN2	Q8NFZ4	835 aa		32.04	■■■□□ 2.72
GTPBP3-227	ENST00000602056	CCER1	Q8TC90	406 aa	Predicted RBP	32.04	■■■□□ 2.72
GTPBP3-227	ENST00000602056	SMARCC1	Q92922	1105 aa	Predicted RBP	32.04	■■■□□ 2.72
GTPBP3-227	ENST00000602056	AMIGO3	Q86WK7	504 aa		32.03	■■■□□ 2.72
GTPBP3-227	ENST00000602056	MSL1	Q68DK7	614 aa		32.02	■■■□□ 2.72
GTPBP3-227	ENST00000602056	PHKG2	P15735	406 aa		32.01	■■■□□ 2.71
GTPBP3-227	ENST00000602056	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.01	■■■□□ 2.71
GTPBP3-227	ENST00000602056	MAP2	P11137	1827 aa	Known RBP	32	■■■□□ 2.71
GTPBP3-227	ENST00000602056	GPR162	Q16538	588 aa		32	■■■□□ 2.71
GTPBP3-227	ENST00000602056	SMIM5	Q71RC9	77 aa		31.98	■■■□□ 2.71
GTPBP3-227	ENST00000602056	IFNL2	Q8IZJ0	200 aa		31.98	■■■□□ 2.71
GTPBP3-227	ENST00000602056	C5	P01031	1676 aa		31.98	■■■□□ 2.71
GTPBP3-227	ENST00000602056	IGSF1	Q8N6C5	1336 aa		31.98	■■■□□ 2.71
GTPBP3-227	ENST00000602056	ASAP1	Q9ULH1	1129 aa		31.97	■■■□□ 2.71
GTPBP3-227	ENST00000602056	LOC102724428	A0A0B4J2F2	783 aa		31.95	■■■□□ 2.71
GTPBP3-227	ENST00000602056	SIK1	P57059	783 aa		31.95	■■■□□ 2.71
GTPBP3-227	ENST00000602056	FLAD1	Q8NFF5	587 aa		31.95	■■■□□ 2.71
GTPBP3-227	ENST00000602056	TMOD3	Q9NYL9	352 aa		31.95	■■■□□ 2.71
GTPBP3-227	ENST00000602056	ITGB4	P16144	1822 aa		31.95	■■■□□ 2.7
GTPBP3-227	ENST00000602056	HMGB2	P26583	209 aa	Known RBP	31.94	■■■□□ 2.7
GTPBP3-227	ENST00000602056	LINC00116	Q8NCU8	138 aa		31.94	■■■□□ 2.7
GTPBP3-227	ENST00000602056	AK7	Q96M32	723 aa		31.93	■■■□□ 2.7
GTPBP3-227	ENST00000602056	ITPK1	Q13572	414 aa		31.92	■■■□□ 2.7
GTPBP3-227	ENST00000602056	C4B	P0C0L5	1744 aa		31.92	■■■□□ 2.7
GTPBP3-227	ENST00000602056	PELP1	Q8IZL8	1130 aa	Known RBP	31.91	■■■□□ 2.7
GTPBP3-227	ENST00000602056	ATG3	Q9NT62	314 aa		31.91	■■■□□ 2.7
GTPBP3-227	ENST00000602056	TAF1L	Q8IZX4	1826 aa		31.91	■■■□□ 2.7
GTPBP3-227	ENST00000602056	MORC1	Q86VD1	984 aa		31.9	■■■□□ 2.7
GTPBP3-227	ENST00000602056	PLEKHG2	Q9H7P9	1386 aa		31.9	■■■□□ 2.7
GTPBP3-227	ENST00000602056	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	31.89	■■■□□ 2.7
GTPBP3-227	ENST00000602056	PHF14	O94880	888 aa		31.89	■■■□□ 2.7
GTPBP3-227	ENST00000602056	YBX3	P16989	372 aa	Known RBP eCLIP	31.88	■■■□□ 2.69
GTPBP3-227	ENST00000602056	AEBP1	Q8IUX7	1158 aa		31.87	■■■□□ 2.69
GTPBP3-227	ENST00000602056	SSFA2	P28290	1259 aa		31.84	■■■□□ 2.69
GTPBP3-227	ENST00000602056	ATP6V1A	P38606	617 aa		31.84	■■■□□ 2.69
GTPBP3-227	ENST00000602056	CD2AP	Q9Y5K6	639 aa		31.84	■■■□□ 2.69
GTPBP3-227	ENST00000602056	PLEKHO1	Q53GL0	409 aa	Predicted RBP	31.83	■■■□□ 2.69
GTPBP3-227	ENST00000602056	SLC4A9	Q96Q91	983 aa		31.83	■■■□□ 2.69

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