RNA–Protein interactions for RNA: ENST00000602001.1

CRX-205, Transcript of cone-rod homeobox, humanhuman

TSL 5

Gene CRX, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-205ENST00000602001 NSD3Q9BZ95 1437 aa17.05■□□□□ 0.32
CRX-205ENST00000602001 PRIM1P49642 420 aaKnown RBP17.05■□□□□ 0.32
CRX-205ENST00000602001 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
CRX-205ENST00000602001 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
CRX-205ENST00000602001 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
CRX-205ENST00000602001 ZCRB1Q8TBF4 217 aaKnown RBP17.02■□□□□ 0.32
CRX-205ENST00000602001 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
CRX-205ENST00000602001 UTRNP46939 3433 aa17.01■□□□□ 0.31
CRX-205ENST00000602001 AKT1S1Q96B36 256 aa17■□□□□ 0.31
CRX-205ENST00000602001 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
CRX-205ENST00000602001 RTL1A6NKG5 1358 aa17■□□□□ 0.31
CRX-205ENST00000602001 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
CRX-205ENST00000602001 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
CRX-205ENST00000602001 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
CRX-205ENST00000602001 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
CRX-205ENST00000602001 INSRP06213 1382 aa16.98■□□□□ 0.31
CRX-205ENST00000602001 PNPLA7Q6ZV29 1317 aa16.97■□□□□ 0.31
CRX-205ENST00000602001 LY75O60449 1722 aa16.97■□□□□ 0.31
CRX-205ENST00000602001 CYP27B1O15528 508 aa16.96■□□□□ 0.31
CRX-205ENST00000602001 HSPA5P11021 654 aaKnown RBP16.96■□□□□ 0.31
CRX-205ENST00000602001 SYT17Q9BSW7 474 aa16.96■□□□□ 0.31
CRX-205ENST00000602001 MTFR1LQ9H019 292 aa16.96■□□□□ 0.31
CRX-205ENST00000602001 FLT4P35916 1363 aa16.96■□□□□ 0.31
CRX-205ENST00000602001 YY1P25490 414 aa16.95■□□□□ 0.3
CRX-205ENST00000602001 AMIGO3Q86WK7 504 aa16.95■□□□□ 0.3
CRX-205ENST00000602001 MAP2P11137 1827 aaKnown RBP16.94■□□□□ 0.3
CRX-205ENST00000602001 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
CRX-205ENST00000602001 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
CRX-205ENST00000602001 RAPGEF4Q8WZA2 1011 aa16.93■□□□□ 0.3
CRX-205ENST00000602001 POLKQ9UBT6 870 aa16.93■□□□□ 0.3
CRX-205ENST00000602001 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
CRX-205ENST00000602001 EYA1Q99502 592 aa16.92■□□□□ 0.3
CRX-205ENST00000602001 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
CRX-205ENST00000602001 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
CRX-205ENST00000602001 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
CRX-205ENST00000602001 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
CRX-205ENST00000602001 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
CRX-205ENST00000602001 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
CRX-205ENST00000602001 ARXQ96QS3 562 aa16.91■□□□□ 0.3
CRX-205ENST00000602001 ITGB4P16144 1822 aa16.91■□□□□ 0.3
CRX-205ENST00000602001 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
CRX-205ENST00000602001 COL23A1Q86Y22 540 aaPredicted RBP16.9■□□□□ 0.3
CRX-205ENST00000602001 TFCP2L1Q9NZI6 479 aa16.9■□□□□ 0.3
CRX-205ENST00000602001 NCAPD2Q15021 1401 aa16.89■□□□□ 0.29
CRX-205ENST00000602001 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
CRX-205ENST00000602001 NLGN2Q8NFZ4 835 aa16.89■□□□□ 0.29
CRX-205ENST00000602001 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
CRX-205ENST00000602001 PANK3Q9H999 370 aa16.89■□□□□ 0.29
CRX-205ENST00000602001 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
CRX-205ENST00000602001 GOLGB1Q14789 3259 aaKnown RBP16.88■□□□□ 0.29
CRX-205ENST00000602001 EIF4A2Q14240 407 aaKnown RBP16.88■□□□□ 0.29
CRX-205ENST00000602001 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
CRX-205ENST00000602001 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
CRX-205ENST00000602001 C5P01031 1676 aa16.88■□□□□ 0.29
CRX-205ENST00000602001 COL24A1Q17RW2 1714 aa16.87■□□□□ 0.29
CRX-205ENST00000602001 PIGBQ92521 554 aa16.87■□□□□ 0.29
CRX-205ENST00000602001 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
CRX-205ENST00000602001 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
CRX-205ENST00000602001 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
CRX-205ENST00000602001 TAF1LQ8IZX4 1826 aa16.86■□□□□ 0.29
CRX-205ENST00000602001 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
CRX-205ENST00000602001 MSH5O43196 834 aa16.85■□□□□ 0.29
CRX-205ENST00000602001 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
CRX-205ENST00000602001 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
CRX-205ENST00000602001 KIF24Q5T7B8 1368 aa16.84■□□□□ 0.29
CRX-205ENST00000602001 AEBP1Q8IUX7 1158 aa16.83■□□□□ 0.28
CRX-205ENST00000602001 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
CRX-205ENST00000602001 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
CRX-205ENST00000602001 WWC3Q9ULE0 1092 aa16.82■□□□□ 0.28
CRX-205ENST00000602001 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
CRX-205ENST00000602001 PHF14O94880 888 aa16.81■□□□□ 0.28
CRX-205ENST00000602001 PHKG2P15735 406 aa16.81■□□□□ 0.28
CRX-205ENST00000602001 ITPK1Q13572 414 aa16.81■□□□□ 0.28
CRX-205ENST00000602001 LINC00116Q8NCU8 138 aa16.81■□□□□ 0.28
CRX-205ENST00000602001 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
CRX-205ENST00000602001 YBX3P16989 372 aaKnown RBP eCLIP16.79■□□□□ 0.28
CRX-205ENST00000602001 ZNF784Q8NCA9 323 aaPredicted RBP16.79■□□□□ 0.28
CRX-205ENST00000602001 SLC4A9Q96Q91 983 aa16.79■□□□□ 0.28
CRX-205ENST00000602001 MAP3K5Q99683 1374 aa16.78■□□□□ 0.28
CRX-205ENST00000602001 UBR3Q6ZT12 1888 aa16.78■□□□□ 0.28
CRX-205ENST00000602001 IGSF1Q8N6C5 1336 aa16.78■□□□□ 0.28
CRX-205ENST00000602001 SLC16A10Q8TF71 515 aa16.78■□□□□ 0.28
CRX-205ENST00000602001 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.28
CRX-205ENST00000602001 POLD1P28340 1107 aa16.77■□□□□ 0.28
CRX-205ENST00000602001 CNGB1Q14028 1251 aaPredicted RBP16.77■□□□□ 0.28
CRX-205ENST00000602001 GPR162Q16538 588 aa16.77■□□□□ 0.28
CRX-205ENST00000602001 ATG3Q9NT62 314 aa16.77■□□□□ 0.28
CRX-205ENST00000602001 SPG7Q9UQ90 795 aa16.77■□□□□ 0.28
CRX-205ENST00000602001 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.27
CRX-205ENST00000602001 KIF7Q2M1P5 1343 aa16.76■□□□□ 0.27
CRX-205ENST00000602001 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
CRX-205ENST00000602001 SIK1P57059 783 aa16.76■□□□□ 0.27
CRX-205ENST00000602001 TMOD3Q9NYL9 352 aa16.75■□□□□ 0.27
CRX-205ENST00000602001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.74■□□□□ 0.27
CRX-205ENST00000602001 MORC1Q86VD1 984 aa16.74■□□□□ 0.27
CRX-205ENST00000602001 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
CRX-205ENST00000602001 CHD4Q14839 1912 aa16.73■□□□□ 0.27
CRX-205ENST00000602001 AK7Q96M32 723 aa16.73■□□□□ 0.27
CRX-205ENST00000602001 ATP6V1AP38606 617 aa16.72■□□□□ 0.27
CRX-205ENST00000602001 AMER1Q5JTC6 1135 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms