RNA–Protein interactions for RNA: ENST00000600475.1

SHD-205, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 3

Gene SHD, Length 379 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-205ENST00000600475 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
SHD-205ENST00000600475 RSPH6AQ9H0K4 717 aa13.54□□□□□ -0.24
SHD-205ENST00000600475 A0A0G2JS52 829 aa13.53□□□□□ -0.24
SHD-205ENST00000600475 CCER2I3L3R5 266 aa13.53□□□□□ -0.24
SHD-205ENST00000600475 MYT1Q01538 1121 aa13.53□□□□□ -0.24
SHD-205ENST00000600475 MIER1Q8N108 512 aa13.53□□□□□ -0.24
SHD-205ENST00000600475 PNISRQ8TF01 805 aaKnown RBP13.53□□□□□ -0.24
SHD-205ENST00000600475 MRS2Q9HD23 443 aa13.53□□□□□ -0.24
SHD-205ENST00000600475 TNS2Q63HR2 1409 aa13.53□□□□□ -0.24
SHD-205ENST00000600475 PDE3BQ13370 1112 aa13.52□□□□□ -0.25
SHD-205ENST00000600475 KRT27Q7Z3Y8 459 aa13.52□□□□□ -0.25
SHD-205ENST00000600475 BRWD3Q6RI45 1802 aa13.51□□□□□ -0.25
SHD-205ENST00000600475 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
SHD-205ENST00000600475 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
SHD-205ENST00000600475 WDR43Q15061 677 aaKnown RBP eCLIP13.51□□□□□ -0.25
SHD-205ENST00000600475 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
SHD-205ENST00000600475 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
SHD-205ENST00000600475 ILDR2Q71H61 639 aa13.51□□□□□ -0.25
SHD-205ENST00000600475 MARCH10Q8NA82 808 aaPredicted RBP13.51□□□□□ -0.25
SHD-205ENST00000600475 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
SHD-205ENST00000600475 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
SHD-205ENST00000600475 CYP27B1O15528 508 aa13.5□□□□□ -0.25
SHD-205ENST00000600475 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
SHD-205ENST00000600475 PLEKHF1Q96S99 279 aa13.5□□□□□ -0.25
SHD-205ENST00000600475 PNNQ9H307 717 aaKnown RBP13.49□□□□□ -0.25
SHD-205ENST00000600475 PKD1L3Q7Z443 1732 aa13.49□□□□□ -0.25
SHD-205ENST00000600475 BCL9O00512 1426 aa13.48□□□□□ -0.25
SHD-205ENST00000600475 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
SHD-205ENST00000600475 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
SHD-205ENST00000600475 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
SHD-205ENST00000600475 MTHFSDQ2M296 383 aaKnown RBP13.48□□□□□ -0.25
SHD-205ENST00000600475 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
SHD-205ENST00000600475 SHANK3Q9BYB0 1731 aa13.47□□□□□ -0.25
SHD-205ENST00000600475 PHKG2P15735 406 aa13.47□□□□□ -0.25
SHD-205ENST00000600475 FAM182BQ5T319 152 aa13.47□□□□□ -0.25
SHD-205ENST00000600475 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
SHD-205ENST00000600475 IFNL2Q8IZJ0 200 aa13.47□□□□□ -0.25
SHD-205ENST00000600475 FAM196AQ6ZSG2 479 aa13.46□□□□□ -0.25
SHD-205ENST00000600475 GAS2L2Q8NHY3 880 aa13.46□□□□□ -0.25
SHD-205ENST00000600475 EP400Q96L91 3159 aa13.46□□□□□ -0.26
SHD-205ENST00000600475 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
SHD-205ENST00000600475 NEFMP07197 916 aa13.44□□□□□ -0.26
SHD-205ENST00000600475 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
SHD-205ENST00000600475 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
SHD-205ENST00000600475 HSP90AB1P08238 724 aaKnown RBP13.43□□□□□ -0.26
SHD-205ENST00000600475 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
SHD-205ENST00000600475 CCDC146Q8IYE0 955 aa13.43□□□□□ -0.26
SHD-205ENST00000600475 MAPK8IP3Q9UPT6 1336 aa13.42□□□□□ -0.26
SHD-205ENST00000600475 FAM9BQ8IZU0 186 aa13.42□□□□□ -0.26
SHD-205ENST00000600475 DCAF5Q96JK2 942 aa13.42□□□□□ -0.26
SHD-205ENST00000600475 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
SHD-205ENST00000600475 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
SHD-205ENST00000600475 TMPOP42166 694 aaKnown RBP13.41□□□□□ -0.26
SHD-205ENST00000600475 MAP3K5Q99683 1374 aa13.41□□□□□ -0.26
SHD-205ENST00000600475 KDM6AO15550 1401 aaPredicted RBP13.4□□□□□ -0.26
SHD-205ENST00000600475 ERVV-2B6SEH9 535 aa13.4□□□□□ -0.26
SHD-205ENST00000600475 HTATSF1O43719 755 aaKnown RBP13.4□□□□□ -0.26
SHD-205ENST00000600475 MPRIPQ6WCQ1 1025 aa13.4□□□□□ -0.26
SHD-205ENST00000600475 IL17REQ8NFR9 667 aa13.4□□□□□ -0.26
SHD-205ENST00000600475 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
SHD-205ENST00000600475 APAF1O14727 1248 aa13.39□□□□□ -0.27
SHD-205ENST00000600475 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
SHD-205ENST00000600475 KCNQ2O43526 872 aa13.39□□□□□ -0.27
SHD-205ENST00000600475 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
SHD-205ENST00000600475 ACSBG1Q96GR2 724 aa13.39□□□□□ -0.27
SHD-205ENST00000600475 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
SHD-205ENST00000600475 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
SHD-205ENST00000600475 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
SHD-205ENST00000600475 CEMIPQ8WUJ3 1361 aa13.38□□□□□ -0.27
SHD-205ENST00000600475 TRIM37O94972 964 aa13.38□□□□□ -0.27
SHD-205ENST00000600475 RIPK4P57078 832 aa13.38□□□□□ -0.27
SHD-205ENST00000600475 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
SHD-205ENST00000600475 PTF1AQ7RTS3 328 aa13.38□□□□□ -0.27
SHD-205ENST00000600475 CCDC125Q86Z20 511 aa13.37□□□□□ -0.27
SHD-205ENST00000600475 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHD-205ENST00000600475 RRP7AQ9Y3A4 280 aaKnown RBP13.37□□□□□ -0.27
SHD-205ENST00000600475 TOGARAM1Q9Y4F4 1720 aa13.36□□□□□ -0.27
SHD-205ENST00000600475 SCN11AQ9UI33 1791 aa13.36□□□□□ -0.27
SHD-205ENST00000600475 PIGBQ92521 554 aa13.36□□□□□ -0.27
SHD-205ENST00000600475 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
SHD-205ENST00000600475 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
SHD-205ENST00000600475 DLG5Q8TDM6 1919 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 NHSQ6T4R5 1651 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 CABP4P57796 275 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 LMOD3Q0VAK6 560 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 DCTN1Q14203 1278 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 NEUROD2Q15784 382 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 MCM10Q7L590 875 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 NFATC2IPQ8NCF5 419 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 SYTL4Q96C24 671 aaPredicted RBP13.35□□□□□ -0.27
SHD-205ENST00000600475 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 DOT1LQ8TEK3 1739 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 MRC1P22897 1456 aa13.35□□□□□ -0.27
SHD-205ENST00000600475 ITGB4P16144 1822 aa13.34□□□□□ -0.27
SHD-205ENST00000600475 PLSCR1O15162 318 aa13.33□□□□□ -0.28
SHD-205ENST00000600475 TEFQ10587 303 aa13.33□□□□□ -0.28
SHD-205ENST00000600475 CCDC27Q2M243 656 aa13.33□□□□□ -0.28
SHD-205ENST00000600475 THUMPD2Q9BTF0 503 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms