RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 TMEM131LA2VDJ0 1609 aa22.84■■□□□ 1.25
ARHGEF1-221ENST00000600387 C16orf71Q8IYS4 520 aaPredicted RBP22.84■■□□□ 1.25
ARHGEF1-221ENST00000600387 ZGPATQ8N5A5 531 aaKnown RBP22.84■■□□□ 1.25
ARHGEF1-221ENST00000600387 RIMS2Q9UQ26 1411 aa22.84■■□□□ 1.25
ARHGEF1-221ENST00000600387 CCDC39Q9UFE4 941 aa22.84■■□□□ 1.25
ARHGEF1-221ENST00000600387 ZDHHC9Q9Y397 364 aa22.84■■□□□ 1.25
ARHGEF1-221ENST00000600387 CDK12Q9NYV4 1490 aaPredicted RBP22.84■■□□□ 1.25
ARHGEF1-221ENST00000600387 IL13P35225 146 aa22.83■■□□□ 1.25
ARHGEF1-221ENST00000600387 MBD3O95983 291 aa22.83■■□□□ 1.24
ARHGEF1-221ENST00000600387 CPSF1Q10570 1443 aaKnown RBP22.83■■□□□ 1.24
ARHGEF1-221ENST00000600387 HAP1P54257 671 aaPredicted RBP22.82■■□□□ 1.24
ARHGEF1-221ENST00000600387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.82■■□□□ 1.24
ARHGEF1-221ENST00000600387 RBM27Q9P2N5 1060 aaKnown RBP22.82■■□□□ 1.24
ARHGEF1-221ENST00000600387 XPCQ01831 940 aaPredicted RBP22.81■■□□□ 1.24
ARHGEF1-221ENST00000600387 TMEM63CQ9P1W3 806 aa22.81■■□□□ 1.24
ARHGEF1-221ENST00000600387 ERC2O15083 957 aa22.8■■□□□ 1.24
ARHGEF1-221ENST00000600387 CEP85Q6P2H3 762 aa22.8■■□□□ 1.24
ARHGEF1-221ENST00000600387 MTERF4Q7Z6M4 381 aaKnown RBP22.8■■□□□ 1.24
ARHGEF1-221ENST00000600387 RBM10P98175 930 aaKnown RBP22.8■■□□□ 1.24
ARHGEF1-221ENST00000600387 UQCRHLA0A096LP55 91 aa22.79■■□□□ 1.24
ARHGEF1-221ENST00000600387 UQCRHP07919 91 aa22.79■■□□□ 1.24
ARHGEF1-221ENST00000600387 FBLN1P23142 703 aa22.79■■□□□ 1.24
ARHGEF1-221ENST00000600387 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
ARHGEF1-221ENST00000600387 SYCE3A1L190 88 aa22.79■■□□□ 1.24
ARHGEF1-221ENST00000600387 OTUD7AQ8TE49 926 aaPredicted RBP22.79■■□□□ 1.24
ARHGEF1-221ENST00000600387 PREX1Q8TCU6 1659 aa22.78■■□□□ 1.24
ARHGEF1-221ENST00000600387 DYNC1I1O14576 645 aa22.78■■□□□ 1.24
ARHGEF1-221ENST00000600387 MCM2P49736 904 aa22.78■■□□□ 1.24
ARHGEF1-221ENST00000600387 FAM13BQ9NYF5 915 aa22.78■■□□□ 1.24
ARHGEF1-221ENST00000600387 RGS12O14924 1447 aa22.77■■□□□ 1.24
ARHGEF1-221ENST00000600387 EMILIN1Q9Y6C2 1016 aa22.77■■□□□ 1.24
ARHGEF1-221ENST00000600387 AATKQ6ZMQ8 1374 aa22.77■■□□□ 1.24
ARHGEF1-221ENST00000600387 RTL1A6NKG5 1358 aa22.76■■□□□ 1.23
ARHGEF1-221ENST00000600387 DIP2CQ9Y2E4 1556 aa22.75■■□□□ 1.23
ARHGEF1-221ENST00000600387 SASS6Q6UVJ0 657 aa22.75■■□□□ 1.23
ARHGEF1-221ENST00000600387 OSBPL3Q9H4L5 887 aa22.75■■□□□ 1.23
ARHGEF1-221ENST00000600387 EDC4Q6P2E9 1401 aaKnown RBP22.75■■□□□ 1.23
ARHGEF1-221ENST00000600387 DLC1Q96QB1 1528 aa22.74■■□□□ 1.23
ARHGEF1-221ENST00000600387 PTPRCP08575 1304 aa22.74■■□□□ 1.23
ARHGEF1-221ENST00000600387 SMARCA5O60264 1052 aaPredicted RBP22.74■■□□□ 1.23
ARHGEF1-221ENST00000600387 SYAP1Q96A49 352 aaPredicted RBP22.74■■□□□ 1.23
ARHGEF1-221ENST00000600387 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
ARHGEF1-221ENST00000600387 MSH6P52701 1360 aa22.74■■□□□ 1.23
ARHGEF1-221ENST00000600387 TMX3Q96JJ7 454 aa22.73■■□□□ 1.23
ARHGEF1-221ENST00000600387 NSFL1CQ9UNZ2 370 aaKnown RBP22.73■■□□□ 1.23
ARHGEF1-221ENST00000600387 FAM83GA6ND36 823 aa22.73■■□□□ 1.23
ARHGEF1-221ENST00000600387 HMMRO75330 724 aa22.73■■□□□ 1.23
ARHGEF1-221ENST00000600387 BRD1O95696 1058 aa22.73■■□□□ 1.23
ARHGEF1-221ENST00000600387 NEK4P51957 841 aa22.71■■□□□ 1.23
ARHGEF1-221ENST00000600387 TSPY26PQ9H489 355 aa22.71■■□□□ 1.23
ARHGEF1-221ENST00000600387 TUBGCP6Q96RT7 1819 aa22.71■■□□□ 1.23
ARHGEF1-221ENST00000600387 CUL4AQ13619 759 aa22.71■■□□□ 1.23
ARHGEF1-221ENST00000600387 KIAA0232Q92628 1395 aa22.7■■□□□ 1.23
ARHGEF1-221ENST00000600387 INTS4Q96HW7 963 aaKnown RBP22.7■■□□□ 1.22
ARHGEF1-221ENST00000600387 APBB1O00213 710 aa22.7■■□□□ 1.22
ARHGEF1-221ENST00000600387 MCCP23508 829 aa22.69■■□□□ 1.22
ARHGEF1-221ENST00000600387 PHF14O94880 888 aa22.69■■□□□ 1.22
ARHGEF1-221ENST00000600387 DCTN1Q14203 1278 aa22.69■■□□□ 1.22
ARHGEF1-221ENST00000600387 PDE1AP54750 535 aa22.68■■□□□ 1.22
ARHGEF1-221ENST00000600387 MEIS3Q99687 375 aa22.68■■□□□ 1.22
ARHGEF1-221ENST00000600387 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
ARHGEF1-221ENST00000600387 ANAPC15P60006 121 aa22.68■■□□□ 1.22
ARHGEF1-221ENST00000600387 KIAA2012Q0VF49 1180 aa22.68■■□□□ 1.22
ARHGEF1-221ENST00000600387 CHAMP1Q96JM3 812 aa22.68■■□□□ 1.22
ARHGEF1-221ENST00000600387 PTMAP06454 111 aaKnown RBP22.67■■□□□ 1.22
ARHGEF1-221ENST00000600387 RNF214Q8ND24 703 aa22.67■■□□□ 1.22
ARHGEF1-221ENST00000600387 NEO1Q92859 1461 aa22.67■■□□□ 1.22
ARHGEF1-221ENST00000600387 FOXD4L5Q5VV16 416 aaPredicted RBP22.66■■□□□ 1.22
ARHGEF1-221ENST00000600387 FOXD4L4Q8WXT5 416 aaPredicted RBP22.66■■□□□ 1.22
ARHGEF1-221ENST00000600387 CHL1O00533 1208 aa22.66■■□□□ 1.22
ARHGEF1-221ENST00000600387 NME9Q86XW9 330 aa22.66■■□□□ 1.22
ARHGEF1-221ENST00000600387 MON2Q7Z3U7 1717 aa22.65■■□□□ 1.22
ARHGEF1-221ENST00000600387 COG3Q96JB2 828 aa22.65■■□□□ 1.22
ARHGEF1-221ENST00000600387 NRKQ7Z2Y5 1582 aa22.65■■□□□ 1.22
ARHGEF1-221ENST00000600387 FAM184AQ8NB25 1140 aa22.65■■□□□ 1.22
ARHGEF1-221ENST00000600387 ESYT1Q9BSJ8 1104 aa22.65■■□□□ 1.22
ARHGEF1-221ENST00000600387 UVSSAQ2YD98 709 aa22.64■■□□□ 1.22
ARHGEF1-221ENST00000600387 SSH2Q76I76 1423 aa22.64■■□□□ 1.21
ARHGEF1-221ENST00000600387 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
ARHGEF1-221ENST00000600387 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
ARHGEF1-221ENST00000600387 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
ARHGEF1-221ENST00000600387 IL17RAQ96F46 866 aa22.62■■□□□ 1.21
ARHGEF1-221ENST00000600387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.62■■□□□ 1.21
ARHGEF1-221ENST00000600387 TCHHQ07283 1943 aa22.62■■□□□ 1.21
ARHGEF1-221ENST00000600387 RAPGEF3O95398 923 aa22.61■■□□□ 1.21
ARHGEF1-221ENST00000600387 KRT24Q2M2I5 525 aa22.61■■□□□ 1.21
ARHGEF1-221ENST00000600387 SMAP1Q8IYB5 467 aaPredicted RBP22.61■■□□□ 1.21
ARHGEF1-221ENST00000600387 SETD1AO15047 1707 aaKnown RBP22.61■■□□□ 1.21
ARHGEF1-221ENST00000600387 WAPLQ7Z5K2 1190 aa22.61■■□□□ 1.21
ARHGEF1-221ENST00000600387 CCT4P50991 539 aaKnown RBP22.6■■□□□ 1.21
ARHGEF1-221ENST00000600387 RRS1Q15050 365 aaKnown RBP22.6■■□□□ 1.21
ARHGEF1-221ENST00000600387 RICTORQ6R327 1708 aa22.6■■□□□ 1.21
ARHGEF1-221ENST00000600387 AKAP12Q02952 1782 aa22.6■■□□□ 1.21
ARHGEF1-221ENST00000600387 MYRIPQ8NFW9 859 aa22.6■■□□□ 1.21
ARHGEF1-221ENST00000600387 ZRANB1Q9UGI0 708 aa22.6■■□□□ 1.21
ARHGEF1-221ENST00000600387 PRDM4Q9UKN5 801 aa22.6■■□□□ 1.21
ARHGEF1-221ENST00000600387 SALL3Q9BXA9 1300 aa22.6■■□□□ 1.21
ARHGEF1-221ENST00000600387 C3P01024 1663 aa22.59■■□□□ 1.21
ARHGEF1-221ENST00000600387 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.59■■□□□ 1.21
ARHGEF1-221ENST00000600387 PRIMPOLQ96LW4 560 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms