RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 NBPF4Q96M43 638 aa19.22■□□□□ 0.67
IRF3-225ENST00000600022 GGNBP2Q9H3C7 697 aa19.22■□□□□ 0.67
IRF3-225ENST00000600022 RGPD2P0DJD1 1756 aa19.21■□□□□ 0.67
IRF3-225ENST00000600022 FYB1O15117 783 aa19.21■□□□□ 0.67
IRF3-225ENST00000600022 ZCRB1Q8TBF4 217 aaKnown RBP19.21■□□□□ 0.67
IRF3-225ENST00000600022 PNPLA7Q6ZV29 1317 aa19.21■□□□□ 0.67
IRF3-225ENST00000600022 NSD2O96028 1365 aa19.2■□□□□ 0.66
IRF3-225ENST00000600022 MEGF6O75095 1541 aa19.2■□□□□ 0.66
IRF3-225ENST00000600022 FAM208AQ9UK61 1670 aaKnown RBP19.18■□□□□ 0.66
IRF3-225ENST00000600022 SLC27A3Q5K4L6 730 aa19.18■□□□□ 0.66
IRF3-225ENST00000600022 ANKRD36BQ8N2N9 1353 aa19.18■□□□□ 0.66
IRF3-225ENST00000600022 HSP90AB2PQ58FF8 381 aa19.17■□□□□ 0.66
IRF3-225ENST00000600022 KLHL34Q8N239 644 aa19.17■□□□□ 0.66
IRF3-225ENST00000600022 TFCP2L1Q9NZI6 479 aa19.17■□□□□ 0.66
IRF3-225ENST00000600022 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
IRF3-225ENST00000600022 SHANK3Q9BYB0 1731 aa19.15■□□□□ 0.66
IRF3-225ENST00000600022 NLGN2Q8NFZ4 835 aa19.15■□□□□ 0.66
IRF3-225ENST00000600022 GPR162Q16538 588 aa19.13■□□□□ 0.65
IRF3-225ENST00000600022 COL23A1Q86Y22 540 aaPredicted RBP19.13■□□□□ 0.65
IRF3-225ENST00000600022 SLC16A10Q8TF71 515 aa19.13■□□□□ 0.65
IRF3-225ENST00000600022 CARD14Q9BXL6 1004 aa19.13■□□□□ 0.65
IRF3-225ENST00000600022 CCNL1Q9UK58 526 aaPredicted RBP19.13■□□□□ 0.65
IRF3-225ENST00000600022 DOT1LQ8TEK3 1739 aa19.13■□□□□ 0.65
IRF3-225ENST00000600022 MAP3K5Q99683 1374 aa19.12■□□□□ 0.65
IRF3-225ENST00000600022 TUBGCP6Q96RT7 1819 aa19.11■□□□□ 0.65
IRF3-225ENST00000600022 TMF1P82094 1093 aa19.11■□□□□ 0.65
IRF3-225ENST00000600022 PELP1Q8IZL8 1130 aaKnown RBP19.11■□□□□ 0.65
IRF3-225ENST00000600022 USP47Q96K76 1375 aa19.1■□□□□ 0.65
IRF3-225ENST00000600022 SMIM5Q71RC9 77 aa19.1■□□□□ 0.65
IRF3-225ENST00000600022 LY75O60449 1722 aa19.09■□□□□ 0.65
IRF3-225ENST00000600022 MSH5O43196 834 aa19.09■□□□□ 0.65
IRF3-225ENST00000600022 POLD1P28340 1107 aa19.09■□□□□ 0.65
IRF3-225ENST00000600022 MSL1Q68DK7 614 aa19.09■□□□□ 0.65
IRF3-225ENST00000600022 RAPGEF4Q8WZA2 1011 aa19.09■□□□□ 0.65
IRF3-225ENST00000600022 CYP27B1O15528 508 aa19.08■□□□□ 0.64
IRF3-225ENST00000600022 AMIGO3Q86WK7 504 aa19.08■□□□□ 0.64
IRF3-225ENST00000600022 EMILIN1Q9Y6C2 1016 aa19.08■□□□□ 0.64
IRF3-225ENST00000600022 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
IRF3-225ENST00000600022 TATP17735 454 aaPredicted RBP19.07■□□□□ 0.64
IRF3-225ENST00000600022 MPRIPQ6WCQ1 1025 aa19.07■□□□□ 0.64
IRF3-225ENST00000600022 INSRP06213 1382 aa19.06■□□□□ 0.64
IRF3-225ENST00000600022 COL24A1Q17RW2 1714 aa19.06■□□□□ 0.64
IRF3-225ENST00000600022 QSER1Q2KHR3 1735 aa19.06■□□□□ 0.64
IRF3-225ENST00000600022 YBX3P16989 372 aaKnown RBP eCLIP19.06■□□□□ 0.64
IRF3-225ENST00000600022 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
IRF3-225ENST00000600022 CHD4Q14839 1912 aa19.04■□□□□ 0.64
IRF3-225ENST00000600022 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
IRF3-225ENST00000600022 PPM1GO15355 546 aaPredicted RBP19.03■□□□□ 0.64
IRF3-225ENST00000600022 C1QTNF8P60827 252 aa19.02■□□□□ 0.64
IRF3-225ENST00000600022 FLT4P35916 1363 aa19.02■□□□□ 0.64
IRF3-225ENST00000600022 PIGBQ92521 554 aa19.01■□□□□ 0.63
IRF3-225ENST00000600022 PALLDQ8WX93 1383 aa19.01■□□□□ 0.63
IRF3-225ENST00000600022 PCDH11XQ9BZA7 1347 aa19■□□□□ 0.63
IRF3-225ENST00000600022 PCDH11YQ9BZA8 1340 aa19■□□□□ 0.63
IRF3-225ENST00000600022 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
IRF3-225ENST00000600022 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
IRF3-225ENST00000600022 CEP350Q5VT06 3117 aa18.99■□□□□ 0.63
IRF3-225ENST00000600022 TOGARAM1Q9Y4F4 1720 aa18.98■□□□□ 0.63
IRF3-225ENST00000600022 SENP3-EIF4A1A0A087X0R7 540 aa18.98■□□□□ 0.63
IRF3-225ENST00000600022 EYA1Q99502 592 aa18.98■□□□□ 0.63
IRF3-225ENST00000600022 KIF20BQ96Q89 1820 aa18.97■□□□□ 0.63
IRF3-225ENST00000600022 WWC3Q9ULE0 1092 aa18.97■□□□□ 0.63
IRF3-225ENST00000600022 PHF14O94880 888 aa18.96■□□□□ 0.63
IRF3-225ENST00000600022 NKX1-1Q15270 411 aaPredicted RBP18.96■□□□□ 0.63
IRF3-225ENST00000600022 CDCA8Q53HL2 280 aa18.96■□□□□ 0.63
IRF3-225ENST00000600022 POLKQ9UBT6 870 aa18.96■□□□□ 0.63
IRF3-225ENST00000600022 C5P01031 1676 aa18.95■□□□□ 0.62
IRF3-225ENST00000600022 LINC00116Q8NCU8 138 aa18.95■□□□□ 0.62
IRF3-225ENST00000600022 ASAP1Q9ULH1 1129 aa18.95■□□□□ 0.62
IRF3-225ENST00000600022 WASHC2AQ641Q2 1341 aa18.95■□□□□ 0.62
IRF3-225ENST00000600022 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
IRF3-225ENST00000600022 TNNT2P45379 298 aaPredicted RBP18.94■□□□□ 0.62
IRF3-225ENST00000600022 ITPK1Q13572 414 aa18.94■□□□□ 0.62
IRF3-225ENST00000600022 ITGB4P16144 1822 aa18.93■□□□□ 0.62
IRF3-225ENST00000600022 TAF1LQ8IZX4 1826 aa18.93■□□□□ 0.62
IRF3-225ENST00000600022 NCAPD2Q15021 1401 aa18.93■□□□□ 0.62
IRF3-225ENST00000600022 POLR3GLQ9BT43 218 aa18.93■□□□□ 0.62
IRF3-225ENST00000600022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.92■□□□□ 0.62
IRF3-225ENST00000600022 SMARCC1Q92922 1105 aaPredicted RBP18.92■□□□□ 0.62
IRF3-225ENST00000600022 AK7Q96M32 723 aa18.92■□□□□ 0.62
IRF3-225ENST00000600022 CD2APQ9Y5K6 639 aa18.92■□□□□ 0.62
IRF3-225ENST00000600022 C4BP0C0L5 1744 aa18.91■□□□□ 0.62
IRF3-225ENST00000600022 LOC102724428A0A0B4J2F2 783 aa18.91■□□□□ 0.62
IRF3-225ENST00000600022 GRIN3BO60391 1043 aa18.91■□□□□ 0.62
IRF3-225ENST00000600022 GIGYF1O75420 1035 aaPredicted RBP18.91■□□□□ 0.62
IRF3-225ENST00000600022 SIK1P57059 783 aa18.91■□□□□ 0.62
IRF3-225ENST00000600022 FLAD1Q8NFF5 587 aa18.91■□□□□ 0.62
IRF3-225ENST00000600022 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
IRF3-225ENST00000600022 PHKG2P15735 406 aa18.9■□□□□ 0.62
IRF3-225ENST00000600022 EIF4A2Q14240 407 aaKnown RBP18.9■□□□□ 0.62
IRF3-225ENST00000600022 PKD1L3Q7Z443 1732 aa18.9■□□□□ 0.62
IRF3-225ENST00000600022 ATG3Q9NT62 314 aa18.89■□□□□ 0.61
IRF3-225ENST00000600022 MAP2P11137 1827 aaKnown RBP18.88■□□□□ 0.61
IRF3-225ENST00000600022 SLC4A9Q96Q91 983 aa18.88■□□□□ 0.61
IRF3-225ENST00000600022 TMOD3Q9NYL9 352 aa18.88■□□□□ 0.61
IRF3-225ENST00000600022 ATP6V1AP38606 617 aa18.87■□□□□ 0.61
IRF3-225ENST00000600022 IFNL2Q8IZJ0 200 aa18.87■□□□□ 0.61
IRF3-225ENST00000600022 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
IRF3-225ENST00000600022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.61
IRF3-225ENST00000600022 ANKRD26Q9UPS8 1709 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms