RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
HOMER3-211ENST00000599808 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
HOMER3-211ENST00000599808 SYTL4Q96C24 671 aaPredicted RBP17.53■□□□□ 0.4
HOMER3-211ENST00000599808 NSD2O96028 1365 aa17.53■□□□□ 0.4
HOMER3-211ENST00000599808 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
HOMER3-211ENST00000599808 CEP350Q5VT06 3117 aa17.52■□□□□ 0.4
HOMER3-211ENST00000599808 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.4
HOMER3-211ENST00000599808 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
HOMER3-211ENST00000599808 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
HOMER3-211ENST00000599808 MEGF6O75095 1541 aa17.48■□□□□ 0.39
HOMER3-211ENST00000599808 YBX3P16989 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
HOMER3-211ENST00000599808 HOXC9P31274 260 aa17.48■□□□□ 0.39
HOMER3-211ENST00000599808 FBLN1P23142 703 aa17.47■□□□□ 0.39
HOMER3-211ENST00000599808 ZCRB1Q8TBF4 217 aaKnown RBP17.47■□□□□ 0.39
HOMER3-211ENST00000599808 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
HOMER3-211ENST00000599808 C5P01031 1676 aa17.46■□□□□ 0.39
HOMER3-211ENST00000599808 COL23A1Q86Y22 540 aaPredicted RBP17.46■□□□□ 0.39
HOMER3-211ENST00000599808 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
HOMER3-211ENST00000599808 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
HOMER3-211ENST00000599808 MSH5O43196 834 aa17.45■□□□□ 0.38
HOMER3-211ENST00000599808 GRIN3BO60391 1043 aa17.45■□□□□ 0.38
HOMER3-211ENST00000599808 AMPHP49418 695 aa17.45■□□□□ 0.38
HOMER3-211ENST00000599808 COG3Q96JB2 828 aa17.45■□□□□ 0.38
HOMER3-211ENST00000599808 USP47Q96K76 1375 aa17.44■□□□□ 0.38
HOMER3-211ENST00000599808 MSL1Q68DK7 614 aa17.43■□□□□ 0.38
HOMER3-211ENST00000599808 ATP10DQ9P241 1426 aa17.41■□□□□ 0.38
HOMER3-211ENST00000599808 IFFO2Q5TF58 517 aa17.41■□□□□ 0.38
HOMER3-211ENST00000599808 NBPF6Q5VWK0 638 aa17.41■□□□□ 0.38
HOMER3-211ENST00000599808 NBPF4Q96M43 638 aa17.41■□□□□ 0.38
HOMER3-211ENST00000599808 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
HOMER3-211ENST00000599808 USHBP1Q8N6Y0 703 aa17.4■□□□□ 0.38
HOMER3-211ENST00000599808 TESK2Q96S53 571 aa17.4■□□□□ 0.38
HOMER3-211ENST00000599808 ITGB4P16144 1822 aa17.4■□□□□ 0.38
HOMER3-211ENST00000599808 RRS1Q15050 365 aaKnown RBP17.39■□□□□ 0.37
HOMER3-211ENST00000599808 CGNL1Q0VF96 1302 aa17.39■□□□□ 0.37
HOMER3-211ENST00000599808 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
HOMER3-211ENST00000599808 TOGARAM1Q9Y4F4 1720 aa17.38■□□□□ 0.37
HOMER3-211ENST00000599808 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
HOMER3-211ENST00000599808 C4BP0C0L5 1744 aa17.37■□□□□ 0.37
HOMER3-211ENST00000599808 UBR3Q6ZT12 1888 aa17.37■□□□□ 0.37
HOMER3-211ENST00000599808 ST20-MTHFSA0A0A6YYL1 179 aa17.36■□□□□ 0.37
HOMER3-211ENST00000599808 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
HOMER3-211ENST00000599808 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
HOMER3-211ENST00000599808 FLAD1Q8NFF5 587 aa17.35■□□□□ 0.37
HOMER3-211ENST00000599808 ADCY9O60503 1353 aa17.35■□□□□ 0.37
HOMER3-211ENST00000599808 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
HOMER3-211ENST00000599808 FYB1O15117 783 aa17.34■□□□□ 0.37
HOMER3-211ENST00000599808 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
HOMER3-211ENST00000599808 KIF20BQ96Q89 1820 aa17.34■□□□□ 0.37
HOMER3-211ENST00000599808 PCDH11XQ9BZA7 1347 aa17.34■□□□□ 0.37
HOMER3-211ENST00000599808 PCDH11YQ9BZA8 1340 aa17.34■□□□□ 0.37
HOMER3-211ENST00000599808 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
HOMER3-211ENST00000599808 GPBP1L1Q9HC44 474 aaPredicted RBP17.34■□□□□ 0.37
HOMER3-211ENST00000599808 MPRIPQ6WCQ1 1025 aa17.33■□□□□ 0.36
HOMER3-211ENST00000599808 AMIGO3Q86WK7 504 aa17.33■□□□□ 0.36
HOMER3-211ENST00000599808 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
HOMER3-211ENST00000599808 INSRP06213 1382 aa17.32■□□□□ 0.36
HOMER3-211ENST00000599808 CYP27B1O15528 508 aa17.32■□□□□ 0.36
HOMER3-211ENST00000599808 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
HOMER3-211ENST00000599808 MAP2P11137 1827 aaKnown RBP17.32■□□□□ 0.36
HOMER3-211ENST00000599808 HMGB2P26583 209 aaKnown RBP17.31■□□□□ 0.36
HOMER3-211ENST00000599808 ZNF526Q8TF50 670 aaPredicted RBP17.31■□□□□ 0.36
HOMER3-211ENST00000599808 SMIM5Q71RC9 77 aa17.3■□□□□ 0.36
HOMER3-211ENST00000599808 AK7Q96M32 723 aa17.3■□□□□ 0.36
HOMER3-211ENST00000599808 FLT4P35916 1363 aa17.29■□□□□ 0.36
HOMER3-211ENST00000599808 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
HOMER3-211ENST00000599808 SLC24A1O60721 1099 aa17.29■□□□□ 0.36
HOMER3-211ENST00000599808 HSPA6P17066 643 aa17.29■□□□□ 0.36
HOMER3-211ENST00000599808 SMARCC1Q92922 1105 aaPredicted RBP17.29■□□□□ 0.36
HOMER3-211ENST00000599808 WWC3Q9ULE0 1092 aa17.29■□□□□ 0.36
HOMER3-211ENST00000599808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.28■□□□□ 0.36
HOMER3-211ENST00000599808 PHF14O94880 888 aa17.28■□□□□ 0.36
HOMER3-211ENST00000599808 PIGBQ92521 554 aa17.27■□□□□ 0.36
HOMER3-211ENST00000599808 KIF24Q5T7B8 1368 aa17.27■□□□□ 0.35
HOMER3-211ENST00000599808 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
HOMER3-211ENST00000599808 NCAPD2Q15021 1401 aa17.25■□□□□ 0.35
HOMER3-211ENST00000599808 KIF13BQ9NQT8 1826 aa17.24■□□□□ 0.35
HOMER3-211ENST00000599808 SSFA2P28290 1259 aa17.24■□□□□ 0.35
HOMER3-211ENST00000599808 NKX1-1Q15270 411 aaPredicted RBP17.24■□□□□ 0.35
HOMER3-211ENST00000599808 LINC00116Q8NCU8 138 aa17.24■□□□□ 0.35
HOMER3-211ENST00000599808 EMILIN1Q9Y6C2 1016 aa17.24■□□□□ 0.35
HOMER3-211ENST00000599808 CICQ96RK0 1608 aaPredicted RBP17.24■□□□□ 0.35
HOMER3-211ENST00000599808 ANKRD26Q9UPS8 1709 aa17.24■□□□□ 0.35
HOMER3-211ENST00000599808 LOC102724428A0A0B4J2F2 783 aa17.23■□□□□ 0.35
HOMER3-211ENST00000599808 SIK1P57059 783 aa17.23■□□□□ 0.35
HOMER3-211ENST00000599808 TMF1P82094 1093 aa17.23■□□□□ 0.35
HOMER3-211ENST00000599808 KIAA1551Q9HCM1 1747 aa17.23■□□□□ 0.35
HOMER3-211ENST00000599808 N4BP2Q86UW6 1770 aaPredicted RBP17.23■□□□□ 0.35
HOMER3-211ENST00000599808 KIF3CO14782 793 aa17.22■□□□□ 0.35
HOMER3-211ENST00000599808 ITPK1Q13572 414 aa17.21■□□□□ 0.35
HOMER3-211ENST00000599808 GNPATO15228 680 aa17.2■□□□□ 0.34
HOMER3-211ENST00000599808 CARD14Q9BXL6 1004 aa17.2■□□□□ 0.34
HOMER3-211ENST00000599808 ASAP1Q9ULH1 1129 aa17.2■□□□□ 0.34
HOMER3-211ENST00000599808 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
HOMER3-211ENST00000599808 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
HOMER3-211ENST00000599808 PXDNLA1KZ92 1463 aa17.18■□□□□ 0.34
HOMER3-211ENST00000599808 PPM1GO15355 546 aaPredicted RBP17.18■□□□□ 0.34
HOMER3-211ENST00000599808 MMP10P09238 476 aa17.18■□□□□ 0.34
HOMER3-211ENST00000599808 ATP6V1AP38606 617 aa17.18■□□□□ 0.34
HOMER3-211ENST00000599808 BRCA1P38398 1863 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms