RNA–Protein interactions for RNA: ENST00000599570.5

SNRPA-207, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-207ENST00000599570 BCL9O00512 1426 aa18.55■□□□□ 0.56
SNRPA-207ENST00000599570 MYBBP1AQ9BQG0 1328 aaKnown RBP18.54■□□□□ 0.56
SNRPA-207ENST00000599570 COL3A1P02461 1466 aaPredicted RBP18.54■□□□□ 0.56
SNRPA-207ENST00000599570 ZCRB1Q8TBF4 217 aaKnown RBP18.54■□□□□ 0.56
SNRPA-207ENST00000599570 SPG7Q9UQ90 795 aa18.54■□□□□ 0.56
SNRPA-207ENST00000599570 BAG6P46379 1132 aa18.53■□□□□ 0.56
SNRPA-207ENST00000599570 FAM182BQ5T319 152 aa18.53■□□□□ 0.56
SNRPA-207ENST00000599570 PRKRIP1Q9H875 184 aaPredicted RBP18.53■□□□□ 0.56
SNRPA-207ENST00000599570 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
SNRPA-207ENST00000599570 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.56
SNRPA-207ENST00000599570 ANP32CO43423 234 aa18.51■□□□□ 0.55
SNRPA-207ENST00000599570 IL13P35225 146 aa18.51■□□□□ 0.55
SNRPA-207ENST00000599570 MARCH10Q8NA82 808 aaPredicted RBP18.51■□□□□ 0.55
SNRPA-207ENST00000599570 DDX54Q8TDD1 881 aaKnown RBP18.51■□□□□ 0.55
SNRPA-207ENST00000599570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.51■□□□□ 0.55
SNRPA-207ENST00000599570 SHANK3Q9BYB0 1731 aa18.51■□□□□ 0.55
SNRPA-207ENST00000599570 NHSQ6T4R5 1651 aa18.5■□□□□ 0.55
SNRPA-207ENST00000599570 SBF2Q86WG5 1849 aa18.5■□□□□ 0.55
SNRPA-207ENST00000599570 TRIM37O94972 964 aa18.49■□□□□ 0.55
SNRPA-207ENST00000599570 KDRP35968 1356 aa18.49■□□□□ 0.55
SNRPA-207ENST00000599570 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
SNRPA-207ENST00000599570 AMOTQ4VCS5 1084 aa18.48■□□□□ 0.55
SNRPA-207ENST00000599570 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
SNRPA-207ENST00000599570 SULT6B1Q6IMI4 303 aa18.48■□□□□ 0.55
SNRPA-207ENST00000599570 DOT1LQ8TEK3 1739 aa18.47■□□□□ 0.55
SNRPA-207ENST00000599570 RGPD3A6NKT7 1758 aaPredicted RBP18.47■□□□□ 0.55
SNRPA-207ENST00000599570 RGPD4Q7Z3J3 1758 aa18.47■□□□□ 0.55
SNRPA-207ENST00000599570 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
SNRPA-207ENST00000599570 KAT6BQ8WYB5 2073 aa18.46■□□□□ 0.55
SNRPA-207ENST00000599570 APBA3O96018 575 aa18.45■□□□□ 0.54
SNRPA-207ENST00000599570 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
SNRPA-207ENST00000599570 NEFMP07197 916 aa18.44■□□□□ 0.54
SNRPA-207ENST00000599570 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
SNRPA-207ENST00000599570 C1orf141Q5JVX7 400 aa18.44■□□□□ 0.54
SNRPA-207ENST00000599570 IFNL2Q8IZJ0 200 aa18.44■□□□□ 0.54
SNRPA-207ENST00000599570 AEBP1Q8IUX7 1158 aa18.43■□□□□ 0.54
SNRPA-207ENST00000599570 HMOX1P09601 288 aa18.42■□□□□ 0.54
SNRPA-207ENST00000599570 ZNF530Q6P9A1 599 aaPredicted RBP18.42■□□□□ 0.54
SNRPA-207ENST00000599570 U2AF1L5P0DN76 240 aaPredicted RBP18.41■□□□□ 0.54
SNRPA-207ENST00000599570 U2AF1Q01081 240 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNRPA-207ENST00000599570 SYTL4Q96C24 671 aaPredicted RBP18.41■□□□□ 0.54
SNRPA-207ENST00000599570 ACSBG1Q96GR2 724 aa18.41■□□□□ 0.54
SNRPA-207ENST00000599570 PNNQ9H307 717 aaKnown RBP18.41■□□□□ 0.54
SNRPA-207ENST00000599570 BTAF1O14981 1849 aa18.4■□□□□ 0.54
SNRPA-207ENST00000599570 CYP27B1O15528 508 aa18.39■□□□□ 0.53
SNRPA-207ENST00000599570 PHKG2P15735 406 aa18.39■□□□□ 0.53
SNRPA-207ENST00000599570 DEFB132Q7Z7B7 95 aa18.39■□□□□ 0.53
SNRPA-207ENST00000599570 RREB1Q92766 1687 aa18.38■□□□□ 0.53
SNRPA-207ENST00000599570 PLSCR1O15162 318 aa18.37■□□□□ 0.53
SNRPA-207ENST00000599570 EN1Q05925 392 aaPredicted RBP18.37■□□□□ 0.53
SNRPA-207ENST00000599570 NKX1-1Q15270 411 aaPredicted RBP18.37■□□□□ 0.53
SNRPA-207ENST00000599570 GAS2L2Q8NHY3 880 aa18.37■□□□□ 0.53
SNRPA-207ENST00000599570 DCAF5Q96JK2 942 aa18.37■□□□□ 0.53
SNRPA-207ENST00000599570 FCHSD2O94868 740 aa18.36■□□□□ 0.53
SNRPA-207ENST00000599570 ITGB4P16144 1822 aa18.36■□□□□ 0.53
SNRPA-207ENST00000599570 HMGB2P26583 209 aaKnown RBP18.36■□□□□ 0.53
SNRPA-207ENST00000599570 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
SNRPA-207ENST00000599570 DIEXFQ68CQ4 756 aaKnown RBP18.36■□□□□ 0.53
SNRPA-207ENST00000599570 TOGARAM1Q9Y4F4 1720 aa18.36■□□□□ 0.53
SNRPA-207ENST00000599570 DLG5Q8TDM6 1919 aa18.35■□□□□ 0.53
SNRPA-207ENST00000599570 SCN11AQ9UI33 1791 aa18.35■□□□□ 0.53
SNRPA-207ENST00000599570 PRIM1P49642 420 aaKnown RBP18.35■□□□□ 0.53
SNRPA-207ENST00000599570 AKAP4Q5JQC9 854 aa18.35■□□□□ 0.53
SNRPA-207ENST00000599570 TMOD3Q9NYL9 352 aa18.35■□□□□ 0.53
SNRPA-207ENST00000599570 KCNQ2O43526 872 aa18.34■□□□□ 0.53
SNRPA-207ENST00000599570 PRKAR2BP31323 418 aa18.34■□□□□ 0.53
SNRPA-207ENST00000599570 MAPK8IP3Q9UPT6 1336 aa18.33■□□□□ 0.53
SNRPA-207ENST00000599570 NUP188Q5SRE5 1749 aa18.33■□□□□ 0.52
SNRPA-207ENST00000599570 EZH2Q15910 746 aaKnown RBP18.33■□□□□ 0.52
SNRPA-207ENST00000599570 CAMKK2Q96RR4 588 aa18.33■□□□□ 0.52
SNRPA-207ENST00000599570 RSPH6AQ9H0K4 717 aa18.33■□□□□ 0.52
SNRPA-207ENST00000599570 ERVV-2B6SEH9 535 aa18.32■□□□□ 0.52
SNRPA-207ENST00000599570 NBPF14Q5TI25 921 aa18.32■□□□□ 0.52
SNRPA-207ENST00000599570 SMARCC1Q92922 1105 aaPredicted RBP18.32■□□□□ 0.52
SNRPA-207ENST00000599570 MRS2Q9HD23 443 aa18.32■□□□□ 0.52
SNRPA-207ENST00000599570 MAP3K5Q99683 1374 aa18.31■□□□□ 0.52
SNRPA-207ENST00000599570 MPRIPQ6WCQ1 1025 aa18.31■□□□□ 0.52
SNRPA-207ENST00000599570 CABP4P57796 275 aa18.29■□□□□ 0.52
SNRPA-207ENST00000599570 MTHFSDQ2M296 383 aaKnown RBP18.29■□□□□ 0.52
SNRPA-207ENST00000599570 SLC27A3Q5K4L6 730 aa18.29■□□□□ 0.52
SNRPA-207ENST00000599570 KDM6AO15550 1401 aaPredicted RBP18.29■□□□□ 0.52
SNRPA-207ENST00000599570 LY75O60449 1722 aa18.29■□□□□ 0.52
SNRPA-207ENST00000599570 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
SNRPA-207ENST00000599570 PTF1AQ7RTS3 328 aa18.28■□□□□ 0.52
SNRPA-207ENST00000599570 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
SNRPA-207ENST00000599570 TXNRD1Q16881 649 aa18.27■□□□□ 0.52
SNRPA-207ENST00000599570 ADAMTS7Q9UKP4 1686 aa18.27■□□□□ 0.52
SNRPA-207ENST00000599570 PALLDQ8WX93 1383 aa18.27■□□□□ 0.51
SNRPA-207ENST00000599570 MRC1P22897 1456 aa18.26■□□□□ 0.51
SNRPA-207ENST00000599570 TEFQ10587 303 aa18.25■□□□□ 0.51
SNRPA-207ENST00000599570 CCDC184Q52MB2 194 aa18.25■□□□□ 0.51
SNRPA-207ENST00000599570 PIGBQ92521 554 aa18.25■□□□□ 0.51
SNRPA-207ENST00000599570 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
SNRPA-207ENST00000599570 STK32BQ9NY57 414 aa18.24■□□□□ 0.51
SNRPA-207ENST00000599570 CCNL1Q9UK58 526 aaPredicted RBP18.24■□□□□ 0.51
SNRPA-207ENST00000599570 SIPA1L3O60292 1781 aaPredicted RBP18.23■□□□□ 0.51
SNRPA-207ENST00000599570 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
SNRPA-207ENST00000599570 SLC52A2Q9HAB3 445 aa18.23■□□□□ 0.51
SNRPA-207ENST00000599570 ADAMTS8Q9UP79 889 aa18.23■□□□□ 0.51
SNRPA-207ENST00000599570 CCER2I3L3R5 266 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms