RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 MTFR1LQ9H019 292 aa20.6■□□□□ 0.89
IRF3-223ENST00000599223 TMF1P82094 1093 aa20.59■□□□□ 0.89
IRF3-223ENST00000599223 TOGARAM1Q9Y4F4 1720 aa20.58■□□□□ 0.89
IRF3-223ENST00000599223 USHBP1Q8N6Y0 703 aa20.58■□□□□ 0.89
IRF3-223ENST00000599223 FHDC1Q9C0D6 1143 aaPredicted RBP20.58■□□□□ 0.89
IRF3-223ENST00000599223 KCNQ4P56696 695 aa20.57■□□□□ 0.88
IRF3-223ENST00000599223 NBPF6Q5VWK0 638 aa20.57■□□□□ 0.88
IRF3-223ENST00000599223 NBPF4Q96M43 638 aa20.57■□□□□ 0.88
IRF3-223ENST00000599223 SLC24A1O60721 1099 aa20.56■□□□□ 0.88
IRF3-223ENST00000599223 AKT1S1Q96B36 256 aa20.56■□□□□ 0.88
IRF3-223ENST00000599223 PKD1L3Q7Z443 1732 aa20.56■□□□□ 0.88
IRF3-223ENST00000599223 NSD3Q9BZ95 1437 aa20.55■□□□□ 0.88
IRF3-223ENST00000599223 PRIM1P49642 420 aaKnown RBP20.55■□□□□ 0.88
IRF3-223ENST00000599223 SYTL4Q96C24 671 aaPredicted RBP20.55■□□□□ 0.88
IRF3-223ENST00000599223 GOLGB1Q14789 3259 aaKnown RBP20.54■□□□□ 0.88
IRF3-223ENST00000599223 SMG6Q86US8 1419 aaKnown RBP20.54■□□□□ 0.88
IRF3-223ENST00000599223 ZCRB1Q8TBF4 217 aaKnown RBP20.54■□□□□ 0.88
IRF3-223ENST00000599223 CARD14Q9BXL6 1004 aa20.54■□□□□ 0.88
IRF3-223ENST00000599223 C5P01031 1676 aa20.54■□□□□ 0.88
IRF3-223ENST00000599223 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
IRF3-223ENST00000599223 HSP90AB2PQ58FF8 381 aa20.53■□□□□ 0.88
IRF3-223ENST00000599223 SYT17Q9BSW7 474 aa20.53■□□□□ 0.88
IRF3-223ENST00000599223 INSRP06213 1382 aa20.53■□□□□ 0.88
IRF3-223ENST00000599223 FLT4P35916 1363 aa20.53■□□□□ 0.88
IRF3-223ENST00000599223 SLC27A3Q5K4L6 730 aa20.52■□□□□ 0.88
IRF3-223ENST00000599223 ITGB4P16144 1822 aa20.52■□□□□ 0.88
IRF3-223ENST00000599223 TAF1LQ8IZX4 1826 aa20.51■□□□□ 0.87
IRF3-223ENST00000599223 CHD4Q14839 1912 aa20.51■□□□□ 0.87
IRF3-223ENST00000599223 MAP3K5Q99683 1374 aa20.5■□□□□ 0.87
IRF3-223ENST00000599223 ARXQ96QS3 562 aa20.5■□□□□ 0.87
IRF3-223ENST00000599223 NCAPD2Q15021 1401 aa20.5■□□□□ 0.87
IRF3-223ENST00000599223 EMILIN1Q9Y6C2 1016 aa20.49■□□□□ 0.87
IRF3-223ENST00000599223 MAP2P11137 1827 aaKnown RBP20.48■□□□□ 0.87
IRF3-223ENST00000599223 KIF24Q5T7B8 1368 aa20.48■□□□□ 0.87
IRF3-223ENST00000599223 DCAF8L1A6NGE4 600 aa20.48■□□□□ 0.87
IRF3-223ENST00000599223 CDCA8Q53HL2 280 aa20.47■□□□□ 0.87
IRF3-223ENST00000599223 RAPGEF4Q8WZA2 1011 aa20.47■□□□□ 0.87
IRF3-223ENST00000599223 CGNL1Q0VF96 1302 aa20.47■□□□□ 0.87
IRF3-223ENST00000599223 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
IRF3-223ENST00000599223 PCDH11XQ9BZA7 1347 aa20.45■□□□□ 0.86
IRF3-223ENST00000599223 PCDH11YQ9BZA8 1340 aa20.45■□□□□ 0.86
IRF3-223ENST00000599223 TATP17735 454 aaPredicted RBP20.44■□□□□ 0.86
IRF3-223ENST00000599223 TFCP2L1Q9NZI6 479 aa20.44■□□□□ 0.86
IRF3-223ENST00000599223 CYP27B1O15528 508 aa20.43■□□□□ 0.86
IRF3-223ENST00000599223 C4BP0C0L5 1744 aa20.42■□□□□ 0.86
IRF3-223ENST00000599223 SLC16A10Q8TF71 515 aa20.42■□□□□ 0.86
IRF3-223ENST00000599223 PALLDQ8WX93 1383 aa20.41■□□□□ 0.86
IRF3-223ENST00000599223 UBR3Q6ZT12 1888 aa20.41■□□□□ 0.86
IRF3-223ENST00000599223 PPM1GO15355 546 aaPredicted RBP20.39■□□□□ 0.85
IRF3-223ENST00000599223 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
IRF3-223ENST00000599223 KLHL34Q8N239 644 aa20.39■□□□□ 0.85
IRF3-223ENST00000599223 ZNF784Q8NCA9 323 aaPredicted RBP20.38■□□□□ 0.85
IRF3-223ENST00000599223 NLGN2Q8NFZ4 835 aa20.38■□□□□ 0.85
IRF3-223ENST00000599223 TIMELESSQ9UNS1 1208 aa20.38■□□□□ 0.85
IRF3-223ENST00000599223 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
IRF3-223ENST00000599223 POLD1P28340 1107 aa20.37■□□□□ 0.85
IRF3-223ENST00000599223 MPRIPQ6WCQ1 1025 aa20.37■□□□□ 0.85
IRF3-223ENST00000599223 PCGF6Q9BYE7 350 aa20.37■□□□□ 0.85
IRF3-223ENST00000599223 WASHC2AQ641Q2 1341 aa20.36■□□□□ 0.85
IRF3-223ENST00000599223 MSL1Q68DK7 614 aa20.36■□□□□ 0.85
IRF3-223ENST00000599223 AMIGO3Q86WK7 504 aa20.36■□□□□ 0.85
IRF3-223ENST00000599223 EYA1Q99502 592 aa20.34■□□□□ 0.85
IRF3-223ENST00000599223 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
IRF3-223ENST00000599223 POLKQ9UBT6 870 aa20.34■□□□□ 0.85
IRF3-223ENST00000599223 MSH5O43196 834 aa20.32■□□□□ 0.84
IRF3-223ENST00000599223 NKX1-1Q15270 411 aaPredicted RBP20.32■□□□□ 0.84
IRF3-223ENST00000599223 PIGBQ92521 554 aa20.32■□□□□ 0.84
IRF3-223ENST00000599223 TNNT2P45379 298 aaPredicted RBP20.31■□□□□ 0.84
IRF3-223ENST00000599223 GPR162Q16538 588 aa20.31■□□□□ 0.84
IRF3-223ENST00000599223 SMIM5Q71RC9 77 aa20.31■□□□□ 0.84
IRF3-223ENST00000599223 EIF4A2Q14240 407 aaKnown RBP20.3■□□□□ 0.84
IRF3-223ENST00000599223 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
IRF3-223ENST00000599223 PELP1Q8IZL8 1130 aaKnown RBP20.29■□□□□ 0.84
IRF3-223ENST00000599223 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
IRF3-223ENST00000599223 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
IRF3-223ENST00000599223 PHKG2P15735 406 aa20.27■□□□□ 0.84
IRF3-223ENST00000599223 LINC00116Q8NCU8 138 aa20.27■□□□□ 0.84
IRF3-223ENST00000599223 SMARCC1Q92922 1105 aaPredicted RBP20.27■□□□□ 0.84
IRF3-223ENST00000599223 COL5A3P25940 1745 aaPredicted RBP20.27■□□□□ 0.83
IRF3-223ENST00000599223 IGSF1Q8N6C5 1336 aa20.27■□□□□ 0.83
IRF3-223ENST00000599223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.26■□□□□ 0.83
IRF3-223ENST00000599223 KDRP35968 1356 aa20.25■□□□□ 0.83
IRF3-223ENST00000599223 PHF14O94880 888 aa20.25■□□□□ 0.83
IRF3-223ENST00000599223 ITPK1Q13572 414 aa20.25■□□□□ 0.83
IRF3-223ENST00000599223 AK7Q96M32 723 aa20.25■□□□□ 0.83
IRF3-223ENST00000599223 PANK3Q9H999 370 aa20.25■□□□□ 0.83
IRF3-223ENST00000599223 ASAP1Q9ULH1 1129 aa20.25■□□□□ 0.83
IRF3-223ENST00000599223 ZNF831Q5JPB2 1677 aa20.24■□□□□ 0.83
IRF3-223ENST00000599223 LOC102724428A0A0B4J2F2 783 aa20.24■□□□□ 0.83
IRF3-223ENST00000599223 SIK1P57059 783 aa20.24■□□□□ 0.83
IRF3-223ENST00000599223 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.832e-7■■■■■ 34.3
IRF3-223ENST00000599223 TMOD3Q9NYL9 352 aa20.24■□□□□ 0.83
IRF3-223ENST00000599223 KDM6AO15550 1401 aaPredicted RBP20.24■□□□□ 0.83
IRF3-223ENST00000599223 PLEKHG2Q9H7P9 1386 aa20.23■□□□□ 0.83
IRF3-223ENST00000599223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.23■□□□□ 0.83
IRF3-223ENST00000599223 IFNL2Q8IZJ0 200 aa20.22■□□□□ 0.83
IRF3-223ENST00000599223 FLAD1Q8NFF5 587 aa20.22■□□□□ 0.83
IRF3-223ENST00000599223 KIAA1551Q9HCM1 1747 aa20.22■□□□□ 0.83
IRF3-223ENST00000599223 ATG3Q9NT62 314 aa20.21■□□□□ 0.83
IRF3-223ENST00000599223 C4AP0C0L4 1744 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms